NO01G00880, NO01G00880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G00880 vs. NCBI_GenBank
Match: EWM29016.1 (ribosomal rna processing protein 36, partial [Nannochloropsis gaditana]) HSP 1 Score: 197.2 bits (500), Expect = 1.000e-46 Identity = 130/268 (48.51%), Postives = 158/268 (58.96%), Query Frame = 0 Query: 151 VKTLPLVERLALMASGVXXXXXXXXXXXXXXXXXXXXENNDKKFSHKSQDKEDVRKGINKHAPKEISSKKPVGRFRVVIEPSTSXXXXXXXXXXXXXXXXXXXXPRFDPAMGNVNYDAFRKAYGFLEEYEEREIQALQAALGKXXXXXXXXXQGKKKLAAMRKEGKXXXXXXXXXXXXXMQERSERQRFERRDAVLRATKKEERAKVAAGIKTPYYLKKKEKRRVELLDRYEHLAKEGRLGKALEKKRKRNAAKDHRWLPRSRREEGQ 419 +K+LP+ ERL L+ASG E ND K + ++ KG NKHAPKE+SSKKPV R R V PS PRFDPA+G VNY+AFRKAYGFLEEYE REIQ LQ ALGK +++ R+EG+ +Q R ER+ FER+++VL+ K+ ER+KV+AG K P+YLKKKEKRR+EL DRYE LAKEG+L LEKKRKRNAAKDHRWLPRSRR + Sbjct: 131 LKSLPMAERLVLLASGA-----HGGGRRRQLRVETVQECNDDKGKEEQPERS---KGHNKHAPKEVSSKKPVSRLRPVF-PS-----GPVGGSQGKAARRKARDPRFDPALGKVNYEAFRKAYGFLEEYEAREIQTLQTALGKDKGVGT-----RREQQQTRREGRGREEEVKEALAKLVQRRREREGFERKESVLQERKRAERSKVSAG-KEPFYLKKKEKRRLELEDRYERLAKEGKLKAVLEKKRKRNAAKDHRWLPRSRRRRAR 378
BLAST of NO01G00880 vs. NCBI_GenBank
Match: XP_005855136.1 (rrna processing protein, partial [Nannochloropsis gaditana CCMP526] >EKU21224.1 rrna processing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 184.9 bits (468), Expect = 5.200e-43 Identity = 138/265 (52.08%), Postives = 160/265 (60.38%), Query Frame = 0 Query: 151 VKTLPLVERLALMASGVXXXXXXXXXXXXXXXXXXXXENNDKKFSHKSQDKEDVRKGINKHAPKEISSKKPVGRFRVVIEPSTSXXXXXXXXXXXXXXXXXXXXPRFDPAMGNVNYDAFRKAYGFLEEYEEREIQALQAALGKXXXXXXXXXQGKKKLAAMRKEGKXXXXXXXXXXXXXMQERSERQRFERRDAVLRATKKEERAKVAAGIKTPYYLKKKEKRRVELLDRYEHLAKEGRLGKALEKKRKRNAAKDHRWLPRSRRE 416 +K+LP+ ERL L+ASG E ND K + ++ KG NKHAPKE+SSKKPV R R V PS PRFDPA+G VNY+AFRKAYGFLEEYE REIQ LQ ALG XXXXX XXXXXX +Q R ER+ FER+++VL+ K+ ER+KV+AG K P+YLKKKEKRR+EL DRYE LAKEG+L LEKKRKRNAAKDHRWLPRSRRE Sbjct: 131 LKSLPMAERLVLLASGA-----HGGGRRRQLRVETVQECNDDKGKEEQPERS---KGHNKHAPKEVSSKKPVSRLRPVF-PS-----GPVGGSQGKAARRKARDPRFDPALGKVNYEAFRKAYGFLEEYEAREIQTLQTALG-----XXXXXXXXXXXXXXXXXXXXXXXXXKEALAKLVQRRREREGFERKESVLQERKRAERSKVSAG-KEPFYLKKKEKRRLELEDRYERLAKEGKLKAVLEKKRKRNAAKDHRWLPRSRRE 375
BLAST of NO01G00880 vs. NCBI_GenBank
Match: CBJ29111.1 (similar to testis intracellular mediator protein [Ectocarpus siliculosus]) HSP 1 Score: 113.2 bits (282), Expect = 1.900e-21 Identity = 83/211 (39.34%), Postives = 115/211 (54.50%), Query Frame = 0 Query: 209 NKHAPKEISSKKPVGRFR--VVIEPSTSXXXXXXXXXXXXXXXXXXXXPRFDPAMGN--VNYDAFRKAYGFLEEYEEREIQALQAALGKXXXXXXXXXQGKKKLAAMRKEGKXXXXXXXXXXXXXMQERSERQRFERRDAVLRATKKEERAKVAAGIKTPYYLKKKEKRRVELLDRYEHLAKEGRLGKALEKKRKRNAAKDHRWLPRSRRE 416 NK+ P+E SS++ VGRFR VV + TS PRF+ G+ +NYD FRKAYGFL Y++ EI+ L+ +L KK + G+ QER+ER + +R +R KK+ER VA+G K P++LK EK+R+ L RYE L ++G+L K +EKKRK+NAAKDHRWLP R++ Sbjct: 121 NKNRPQEASSRRAVGRFREVVVTKRKTS------------------RDPRFEGGGGSSKLNYDIFRKAYGFLGTYQDSEIEELKKSL--------------KKEKNQERSGR-----LQALLTRLQQERAERSQGDRTRTAIREAKKKEREAVASG-KKPFFLKGSEKKRLSLEQRYEGLKEDGKLSKFMEKKRKKNAAKDHRWLPSKRQK 293
BLAST of NO01G00880 vs. NCBI_GenBank
Match: OQR90468.1 (hypothetical protein ACHHYP_05504 [Achlya hypogyna]) HSP 1 Score: 109.4 bits (272), Expect = 2.800e-20 Identity = 83/223 (37.22%), Postives = 122/223 (54.71%), Query Frame = 0 Query: 195 SHKSQDKEDVR--KGINKHAPKEISSKKPVGRFRVVIEPSTSXXXXXXXXXXXXXXXXXXXXPRFDPAMGNVNYDAFRKAYGFLEEYEEREIQALQAALGKXXXXXXXXXQGKKKLAAMRKEGKXXXXXXXXXXXXXMQERSERQRFER-RDAVLRATKKEERAKVAAGIKTPYYLKKKEKRRVELLDRYEHLAKEGRLGKALEKKRKRNAAKDHRWLPRSRR 415 S +S ++DVR K NK+ P+E++SK+PV RFR V++ PRFD A G +N D F+K+Y FLE+Y++ E+ ++ L K K R+E K QER+E R +R R+A L+ K+EER VA G K+ +YLK+K+K+++EL +Y+ L + GRL K + K+RK+NA KDHRWLP R+ Sbjct: 28 SDESGSEDDVRSTKRANKNCPREMTSKRPVARFREVLQ----------------IRKKGSRDPRFDNASGKLNEDLFKKSYAFLEDYKDAELDDVKKQL------------RKAKSKTRREELK-------ADLATRKQERAESHRADRIREATLK-RKREEREAVANG-KSAFYLKRKDKKQIELKAKYDELQESGRLSKFMAKRRKKNANKDHRWLPTQRK 213
BLAST of NO01G00880 vs. NCBI_GenBank
Match: CCA16215.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 105.1 bits (261), Expect = 5.300e-19 Identity = 72/206 (34.95%), Postives = 107/206 (51.94%), Query Frame = 0 Query: 209 NKHAPKEISSKKPVGRFRVVIEPSTSXXXXXXXXXXXXXXXXXXXXPRFDPAMGNVNYDAFRKAYGFLEEYEEREIQALQAALGKXXXXXXXXXQGKKKLAAMR-KEGKXXXXXXXXXXXXXMQERSERQRFERRDAVLRATKKEERAKVAAGIKTPYYLKKKEKRRVELLDRYEHLAKEGRLGKALEKKRKRNAAKDHRWLPRSR 414 NK+ P EI+SKKPVGRFR V++ PRFDP G +N D F+K+Y FL+ Y+E E++ L+ + K +G ++ + E QE ++++ +R L K++ER V G K P+Y+K+KEK+ VEL +++ L + G L K + KKRK+N+ KDHRWLPR R Sbjct: 44 NKNQPIEITSKKPVGRFRQVVDVKNK----------------RPHDPRFDPLCGKLNQDLFQKSYSFLDSYKENELETLRKEVRK---AKNKERKGDLQVCILYVTETLHSISMLQQKVNLLAQEIKQKKKSDRLQNALTERKRQEREAVMNG-KNPFYMKRKEKKNVELQIKFQELEESGNLVKFMAKKRKKNSNKDHRWLPRKR 229
BLAST of NO01G00880 vs. NCBI_GenBank
Match: CCI45432.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 104.0 bits (258), Expect = 1.200e-18 Identity = 72/205 (35.12%), Postives = 103/205 (50.24%), Query Frame = 0 Query: 209 NKHAPKEISSKKPVGRFRVVIEPSTSXXXXXXXXXXXXXXXXXXXXPRFDPAMGNVNYDAFRKAYGFLEEYEEREIQALQAALGKXXXXXXXXXQGKKKLAAMRKEGKXXXXXXXXXXXXXMQERSERQRFERRDAVLRATKKEERAKVAAGIKTPYYLKKKEKRRVELLDRYEHLAKEGRLGKALEKKRKRNAAKDHRWLPRSR 414 NK+ P E++SKKPVGRFR V++ PRFDP G +N D F K+Y FL+ Y+E E+ L+ + K A KE K QE E+++ R L K++ER V G K+P+Y+K+K+K++VEL +++ L + G L + KKRK+N+ KDHRWLPR R Sbjct: 44 NKNQPIEMTSKKPVGRFRQVVDVRNK----------------RPHDPRFDPLCGKLNQDLFAKSYSFLDSYKENELDTLRKEVKK----------------AKNKERK---GDLQQKVNVLAQEIKEKKKSSRLQNALTERKRQEREAVING-KSPFYMKRKDKKKVELQIKFQELEESGNLANFMAKKRKKNSNKDHRWLPRRR 212
BLAST of NO01G00880 vs. NCBI_GenBank
Match: XP_008607697.1 (hypothetical protein SDRG_03831 [Saprolegnia diclina VS20] >EQC38873.1 hypothetical protein SDRG_03831 [Saprolegnia diclina VS20]) HSP 1 Score: 102.1 bits (253), Expect = 4.500e-18 Identity = 80/216 (37.04%), Postives = 113/216 (52.31%), Query Frame = 0 Query: 200 DKEDVRKGINKHAPKEISSKKPVGRFRVVIEPSTSXXXXXXXXXXXXXXXXXXXXPRFDPAMGNVNYDAFRKAYGFLEEYEEREIQALQAALGKXXXXXXXXXQGKKKLAAMRKEGKXXXXXXXXXXXXXMQERSERQRFERRDAVLRATKKEERAKVAAGIKTPYYLKKKEKRRVELLDRYEHLAKEGRLGKALEKKRKRNAAKDHRWLPRSRRE 416 D K NK+ P+E++SK+PV RFR V++ PRFD A G +N D F+KAY FLE+Y++ E+ ++ L KK +A RK XXXXX E R ++ + K+EER VA G K+ +YLK+K+K++VEL +Y+ L + GRL K + K+RK+NA KDHRWLP R+E Sbjct: 39 DDGPTTKRANKNCPREMTSKRPVARFREVLQ----------------IRKKASRDPRFDAASGKLNEDLFKKAYTFLEDYKDAELDEVKKQL-------------KKAKSATRKAA------LKEXXXXXXXXXXETHRADKIREATQKRKREEREAVANG-KSAFYLKRKDKKQVELKAKYDELQESGRLSKFMAKRRKKNANKDHRWLPTQRKE 218
BLAST of NO01G00880 vs. NCBI_GenBank
Match: XP_009834331.1 (hypothetical protein H257_09714 [Aphanomyces astaci] >ETV76206.1 hypothetical protein H257_09714 [Aphanomyces astaci]) HSP 1 Score: 101.7 bits (252), Expect = 5.800e-18 Identity = 77/217 (35.48%), Postives = 114/217 (52.53%), Query Frame = 0 Query: 199 QDKEDVRKGINKHAPKEISSKKPVGRFRVVIEPSTSXXXXXXXXXXXXXXXXXXXXPRFDPAMGNVNYDAFRKAYGFLEEYEEREIQALQAALGKXXXXXXXXXQGKKKLAAMRKEGKXXXXXXXXXXXXXMQERSERQRFER-RDAVLRATKKEERAKVAAGIKTPYYLKKKEKRRVELLDRYEHLAKEGRLGKALEKKRKRNAAKDHRWLPRSRR 415 +D + K NK+ P+EI+SK+PVGRFR V++ PRFD A G +N D +K+Y FL++ +E E+Q + KK+L + K QE +E +R +R RDA L+ K+EER V G K +YLK+K+K+++EL +++ L + GRL K +EK+RK+NA KDHRWLP R+ Sbjct: 60 EDHQPTTKRANKNRPREITSKRPVGRFREVLQ----------------VRKKTTRDPRFDHASGKLNEDLLKKSYAFLDDIKEAELQ-----------------EAKKQL--KHAKSKTRKTELQQDISSRKQELAEAKRADRIRDANLK-RKREEREAVENG-KGAFYLKRKDKKQLELKAKFDELQESGRLSKFMEKRRKKNANKDHRWLPTQRK 239
BLAST of NO01G00880 vs. NCBI_GenBank
Match: POM61792.1 (RRNA processing protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 98.2 bits (243), Expect = 6.500e-17 Identity = 71/206 (34.47%), Postives = 105/206 (50.97%), Query Frame = 0 Query: 209 NKHAPKEISSKKPVGRFRVVIEPSTSXXXXXXXXXXXXXXXXXXXXPRFDPAMGNVNYDAFRKAYGFLEEYEEREIQALQAALGKXXXXXXXXXQGKKKLAAMRKEGKXXXXXXXXXXXXXMQERSERQRFERRDAVLRATKKEERAKVAAGIKTPYYLKKKEKRRVELLDRYEHLAKEGRLGKALEKKRKRNAAKDHRWLPRSRR 415 NK+ P E+SSK+ VGRFR V+E PRF+ G +N D F K+Y FL+EY++RE+Q L+ L KK M K+ + QE +E+ + E+ + L VA+G K +YLK+K+K+++EL +++ L + GRL K + KKRK+NA+KDHRWLP R+ Sbjct: 48 NKNQPLELSSKRAVGRFRQVVEVKKK----------------RVLDPRFEAQSGRLNEDLFNKSYAFLDEYKQRELQELKQQL--------------KKTKNMTKKDE-----LKHEIALRQQEMTEKNKQEKIKSALTKXXXXXXXAVASG-KGAFYLKRKDKKKLELQAKFQDLQETGRLSKFMAKKRKKNASKDHRWLPTQRK 217
BLAST of NO01G00880 vs. NCBI_GenBank
Match: XP_009519457.1 (hypothetical protein PHYSODRAFT_485386 [Phytophthora sojae] >EGZ24169.1 hypothetical protein PHYSODRAFT_485386 [Phytophthora sojae]) HSP 1 Score: 95.5 bits (236), Expect = 4.200e-16 Identity = 69/206 (33.50%), Postives = 103/206 (50.00%), Query Frame = 0 Query: 209 NKHAPKEISSKKPVGRFRVVIEPSTSXXXXXXXXXXXXXXXXXXXXPRFDPAMGNVNYDAFRKAYGFLEEYEEREIQALQAALGKXXXXXXXXXQGKKKLAAMRKEGKXXXXXXXXXXXXXMQERSERQRFERRDAVLRATKKEERAKVAAGIKTPYYLKKKEKRRVELLDRYEHLAKEGRLGKALEKKRKRNAAKDHRWLPRSRR 415 NK+ P E+SSK+ VGRFR V+E PRF+ G +N D F K+Y FL++Y++RE+Q L+ L KK + +K+ QE +E+Q+ L VA+G K +YLK+K+K+++EL +++ L + GRL K + KKRK+NA+KDHRWLP R+ Sbjct: 46 NKNQPLELSSKRAVGRFRQVVE----------------VKKRRALDPRFEAQSGRLNEDLFNKSYAFLDDYKQRELQELKQQL-------------KKTKSVTKKD------ELKHEIALRQQEMTEKQKXXXXXXALTXXXXXXXEAVASG-KGAFYLKRKDKKKLELQAKFQDLQETGRLSKFMAKKRKKNASKDHRWLPTQRK 215 The following BLAST results are available for this feature:
BLAST of NO01G00880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00880 ID=NO01G00880|Name=NO01G00880|organism=Nannochloropsis oceanica|type=gene|length=1403bpback to top protein sequence of NO01G00880.1 >NO01G00880.1-protein ID=NO01G00880.1-protein|Name=NO01G00880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=424bpback to top Synonyms
Publications
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