NO01G00660, NO01G00660 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G00660 vs. NCBI_GenBank
Match: EWM29000.1 (pterin-4-alpha-carbinolamine dehydratase [Nannochloropsis gaditana]) HSP 1 Score: 152.1 bits (383), Expect = 1.200e-33 Identity = 77/127 (60.63%), Postives = 91/127 (71.65%), Query Frame = 0 Query: 6 ILRPPTAFQRIRAFLSTSTSQSTPPTPPKKVPRLSPQAVKVALTMDLPGWADVKG--RDALEKTYLFKDFGEAWGFMSRAALLAEKHDHHPEWFNVYNKVHVVLTTHDAGGVSQKDVAMGKAMDALV 131 +L +AF + + T SQ +++P LS QA AL DL GW DVKG RDA+EKT++F DF EAWGFMSR ALLAE+H+HHPEW NVYNKVHVVLTTHDAGGVSQKDV + KAMD +V Sbjct: 22 LLHGTSAFHNVHCNV-TRPSQPFSTVGSQRIPHLSKQARAAALKEDLAGWVDVKGGERDAVEKTFIFHDFNEAWGFMSRVALLAEQHNHHPEWSNVYNKVHVVLTTHDAGGVSQKDVTLAKAMDTIV 147
BLAST of NO01G00660 vs. NCBI_GenBank
Match: XP_005853477.1 (pterin-4-alpha-carbinolamine dehydratase, partial [Nannochloropsis gaditana CCMP526] >EKU22883.1 pterin-4-alpha-carbinolamine dehydratase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 151.0 bits (380), Expect = 2.800e-33 Identity = 76/127 (59.84%), Postives = 90/127 (70.87%), Query Frame = 0 Query: 6 ILRPPTAFQRIRAFLSTSTSQSTPPTPPKKVPRLSPQAVKVALTMDLPGWADVKG--RDALEKTYLFKDFGEAWGFMSRAALLAEKHDHHPEWFNVYNKVHVVLTTHDAGGVSQKDVAMGKAMDALV 131 +L +AF + + T SQ +++P LS QA AL DL GW DVKG RDA+EKT++F DF EAWGFMSR ALLAE+H+HHPEW NVYNKVHV+LTTHDAGGVSQKDV + KAMD V Sbjct: 39 LLHGTSAFHNVHCNV-TRPSQPFSTVGSQRIPHLSKQARAAALKEDLAGWVDVKGGERDAVEKTFIFHDFNEAWGFMSRVALLAEQHNHHPEWSNVYNKVHVILTTHDAGGVSQKDVTLAKAMDTFV 164
BLAST of NO01G00660 vs. NCBI_GenBank
Match: WP_019015651.1 (4a-hydroxytetrahydrobiopterin dehydratase [Elioraea tepidiphila]) HSP 1 Score: 129.4 bits (324), Expect = 8.600e-27 Identity = 57/94 (60.64%), Postives = 75/94 (79.79%), Query Frame = 0 Query: 36 VPRLSPQAVKVALTMDLPGWADVKGRDALEKTYLFKDFGEAWGFMSRAALLAEKHDHHPEWFNVYNKVHVVLTTHDAGGVSQKDVAMGKAMDAL 130 V +LS +A + L LPGWA V+GRDA+ + + F+DF EAW FMSR ALLAEKHDHHPEWFNV+N+V +VL+THDAGG+S +DV + +A+DA+ Sbjct: 2 VAKLS-EAERAGLAQALPGWALVEGRDAIRRAFRFRDFPEAWAFMSRVALLAEKHDHHPEWFNVWNRVEIVLSTHDAGGLSMRDVTLARAIDAI 94
BLAST of NO01G00660 vs. NCBI_GenBank
Match: WP_104830534.1 (4a-hydroxytetrahydrobiopterin dehydratase [Marinicaulis flavus] >PQA87347.1 4a-hydroxytetrahydrobiopterin dehydratase [Marinicaulis flavus]) HSP 1 Score: 129.0 bits (323), Expect = 1.100e-26 Identity = 58/96 (60.42%), Postives = 74/96 (77.08%), Query Frame = 0 Query: 33 PKKVPRLSPQAVKVALTMDLPGWADVKGRDALEKTYLFKDFGEAWGFMSRAALLAEKHDHHPEWFNVYNKVHVVLTTHDAGGVSQKDVAMGKAMDA 129 P+ V +LSP+A + A D PGWA V+ RDA++K++ F DF EAWGFM R AL AEK DHHPEWFNVYN+V + LTTHDAGG+S++DVA+ +DA Sbjct: 19 PRMVEKLSPEA-RAAFLKDRPGWAPVEDRDAVKKSFAFDDFNEAWGFMCRVALAAEKADHHPEWFNVYNRVEITLTTHDAGGLSERDVALAGFIDA 113
BLAST of NO01G00660 vs. NCBI_GenBank
Match: WP_024515076.1 (4a-hydroxytetrahydrobiopterin dehydratase [Bradyrhizobium sp. Tv2a-2]) HSP 1 Score: 128.3 bits (321), Expect = 1.900e-26 Identity = 61/94 (64.89%), Postives = 76/94 (80.85%), Query Frame = 0 Query: 36 VPRLSPQAVKVALTMDLPGWADVKGRDALEKTYLFKDFGEAWGFMSRAALLAEKHDHHPEWFNVYNKVHVVLTTHDAGGVSQKDVAMGKAMDAL 130 V RLS +A K AL L GW +V GR+A+ +T++FKDF EA+GFMSRAAL+AEKHDHHPEW NVY V VVL THDAGGV+++DVA+ KAM+A+ Sbjct: 2 VERLSAEARKSAL-KTLSGWTEVAGREAIARTFVFKDFNEAFGFMSRAALVAEKHDHHPEWRNVYKTVEVVLATHDAGGVTERDVALAKAMNAI 94
BLAST of NO01G00660 vs. NCBI_GenBank
Match: WP_061023815.1 (4a-hydroxytetrahydrobiopterin dehydratase [Bradyrhizobium sp. CCH5-F6]) HSP 1 Score: 128.3 bits (321), Expect = 1.900e-26 Identity = 59/92 (64.13%), Postives = 77/92 (83.70%), Query Frame = 0 Query: 38 RLSPQAVKVALTMDLPGWADVKGRDALEKTYLFKDFGEAWGFMSRAALLAEKHDHHPEWFNVYNKVHVVLTTHDAGGVSQKDVAMGKAMDAL 130 RLS +A K A+ +LPGW DV+GRDA+ KT++F+DF EA+GFM+RAAL+AEK DHHPEW NVY V VVL+THDAGGV+ +D+A+ KAM+A+ Sbjct: 4 RLSAEARKQAMG-ELPGWTDVQGRDAIAKTFVFRDFNEAFGFMTRAALVAEKMDHHPEWRNVYKTVEVVLSTHDAGGVTARDIALAKAMNAI 94
BLAST of NO01G00660 vs. NCBI_GenBank
Match: WP_072818293.1 (4a-hydroxytetrahydrobiopterin dehydratase [Bradyrhizobium erythrophlei] >SHN74172.1 pterin-4-alpha-carbinolamine dehydratase [Bradyrhizobium erythrophlei]) HSP 1 Score: 127.9 bits (320), Expect = 2.500e-26 Identity = 59/97 (60.82%), Postives = 77/97 (79.38%), Query Frame = 0 Query: 36 VPRLSPQAVKVALTMDLPGWADVKGRDALEKTYLFKDFGEAWGFMSRAALLAEKHDHHPEWFNVYNKVHVVLTTHDAGGVSQKDVAMGKAMDALVVE 133 V RL+ +A K AL +L GW +V GRDA+E+T++FKDF EA+GFM RAAL+AEK DHHPEW NVY V VVL+THDAGGV+Q+D+ + KAM+A+ + Sbjct: 2 VERLTAEARKTAL-KELSGWTEVAGRDAIERTFVFKDFNEAFGFMGRAALVAEKSDHHPEWRNVYKTVEVVLSTHDAGGVTQRDIELAKAMNAIAAQ 97
BLAST of NO01G00660 vs. NCBI_GenBank
Match: WP_024511192.1 (4a-hydroxytetrahydrobiopterin dehydratase [Bradyrhizobium sp. ARR65]) HSP 1 Score: 127.1 bits (318), Expect = 4.300e-26 Identity = 58/94 (61.70%), Postives = 78/94 (82.98%), Query Frame = 0 Query: 36 VPRLSPQAVKVALTMDLPGWADVKGRDALEKTYLFKDFGEAWGFMSRAALLAEKHDHHPEWFNVYNKVHVVLTTHDAGGVSQKDVAMGKAMDAL 130 V RL+ +A K L LPGWA+V+GR+A+ +T++FKDF EA+GFM+RAAL+AEKHDHHPEW NVY V VVL+THDAGGV+++D+ + KAM+A+ Sbjct: 2 VNRLTAEARKSEL-KGLPGWAEVQGREAITRTFVFKDFNEAFGFMARAALVAEKHDHHPEWRNVYKTVEVVLSTHDAGGVTERDIKLAKAMNAI 94
BLAST of NO01G00660 vs. NCBI_GenBank
Match: WP_057862324.1 (4a-hydroxytetrahydrobiopterin dehydratase [Bradyrhizobium lablabi] >KRR17343.1 pterin-4-alpha-carbinolamine dehydratase [Bradyrhizobium lablabi]) HSP 1 Score: 127.1 bits (318), Expect = 4.300e-26 Identity = 58/94 (61.70%), Postives = 78/94 (82.98%), Query Frame = 0 Query: 36 VPRLSPQAVKVALTMDLPGWADVKGRDALEKTYLFKDFGEAWGFMSRAALLAEKHDHHPEWFNVYNKVHVVLTTHDAGGVSQKDVAMGKAMDAL 130 V RLSP+A K AL +L GW+++ GR+A+++T+ FKDF EA+GFMSRAAL+AEK+DHHPEW NVY V VVL THDAGGV+++D+ + KAM+A+ Sbjct: 2 VERLSPEARKSALA-ELSGWSELSGREAIQRTFTFKDFNEAFGFMSRAALVAEKNDHHPEWKNVYRTVEVVLATHDAGGVTRRDIDLAKAMNAI 94
BLAST of NO01G00660 vs. NCBI_GenBank
Match: WP_100233156.1 (4a-hydroxytetrahydrobiopterin dehydratase [Bradyrhizobium sp. INPA54B] >PJG53826.1 4a-hydroxytetrahydrobiopterin dehydratase [Bradyrhizobium sp. INPA54B]) HSP 1 Score: 127.1 bits (318), Expect = 4.300e-26 Identity = 60/92 (65.22%), Postives = 76/92 (82.61%), Query Frame = 0 Query: 38 RLSPQAVKVALTMDLPGWADVKGRDALEKTYLFKDFGEAWGFMSRAALLAEKHDHHPEWFNVYNKVHVVLTTHDAGGVSQKDVAMGKAMDAL 130 RLS +A + AL LPGW DV+GRDA+ KT++FKDF EA+GFM+RAAL+AEK DHHPEW NVY V VVL+THDAGGV+ +D+A+ KAM+A+ Sbjct: 4 RLSAEARQQALG-GLPGWTDVQGRDAIGKTFVFKDFNEAFGFMARAALVAEKMDHHPEWRNVYKTVEVVLSTHDAGGVTARDIALAKAMNAI 94 The following BLAST results are available for this feature:
BLAST of NO01G00660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00660 ID=NO01G00660|Name=NO01G00660|organism=Nannochloropsis oceanica|type=gene|length=2138bpback to top protein sequence of NO01G00660.1 >NO01G00660.1-protein ID=NO01G00660.1-protein|Name=NO01G00660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=139bpback to top Synonyms
Publications
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