NO01G00510, NO01G00510 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G00510 vs. NCBI_GenBank
Match: EWM28982.1 (hypothetical protein Naga_100737g2 [Nannochloropsis gaditana]) HSP 1 Score: 317.8 bits (813), Expect = 2.300e-83 Identity = 162/191 (84.82%), Postives = 169/191 (88.48%), Query Frame = 0 Query: 1 MDQLGDLDHEKLITAGLLLQGVFVLCYTICSFVVASTANMGFNAVLTALLYIFYVAGTYHVLQRSKMPLAIGFVLGVSVMITFLSLMTAIFWGQLSNCSPGYYDVKRYSCTNPSAYGATCAFATLLFLIQLFFTSALVLWRDEFIQDASAYDDIHXXXXXXXXXXXXXXXXPGYEGGAQQASYNQSTTADL 192 MDQLGDLDHEKLITAGL+ QGVFVLCYTICSFVVASTANMGFNAVLTALLYIFYVAGTYHVLQRSKMPLA+GFVLGVSVMITFLSLMTAIFWGQL+NCSPGYYD+KRYSCTN SAY ATCAFATLLFL+QL FTSALVLWRDEFIQD+SAYDDIH PGYEGG QQ SYNQS+TADL Sbjct: 1 MDQLGDLDHEKLITAGLVTQGVFVLCYTICSFVVASTANMGFNAVLTALLYIFYVAGTYHVLQRSKMPLAVGFVLGVSVMITFLSLMTAIFWGQLANCSPGYYDIKRYSCTNRSAYSATCAFATLLFLVQLVFTSALVLWRDEFIQDSSAYDDIH---GAGGASSSSAAGLPGYEGGTQQPSYNQSSTADL 188
BLAST of NO01G00510 vs. NCBI_GenBank
Match: CBN78947.1 (hypothetical protein Esi_0157_0040 [Ectocarpus siliculosus]) HSP 1 Score: 99.8 bits (247), Expect = 1.000e-17 Identity = 56/159 (35.22%), Postives = 84/159 (52.83%), Query Frame = 0 Query: 7 LDHEKLITAGLLLQGVFVLCYTICSFVVASTANMGFNAVLTALLYIFYVAGTYHVLQRSKM------------PLAIGFVLGVSVMITFLSLMTAIFWGQLSNCSPGYYDVKRYSCTNPSAYGATCAFATLLFLIQLFFTSALVLWRDEFIQDASAYDD 154 LD K + +L V +C+ IC+ VV+S AN G N VLTA++Y+ YV V R + P+ G ++G++ M+ FLSLMTA++WGQ+S C DV YSC N A FA+ L + + +AL+LW+++ YD+ Sbjct: 13 LDKRKSLNTVVLAMAVLTICFFICACVVSSNANAGLNVVLTAMMYVAYVGLLAVVFNRKRATDGGMDTAMAIEPIVGGGLIGITTMMCFLSLMTAVYWGQMSGCEDDTDDVDGYSCYNSFGMAAVAWFASFLLISEAVTLAALILWKEDMFFVDGGYDN 171
BLAST of NO01G00510 vs. NCBI_GenBank
Match: CBJ30398.1 (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 92.4 bits (228), Expect = 1.600e-15 Identity = 55/145 (37.93%), Postives = 87/145 (60.00%), Query Frame = 0 Query: 15 AGLLLQGVFVLCYTICSFVVASTANMGFNAVLTALLYIFYVAGTYHVLQRSKMPLAIGFVLGVSVMITFLSLMTAIFWGQLSNCSPGY-YDVKRYSCTNPSAYGATCAFATLLFLIQLFFTSAL-----VLWRDEFIQDASAYDD 154 +G++L VF + IC+ VVAS N GF+ VLT LL + G +L+R ++GF++GV++++ ++LMTAI+WGQL+ C Y D +YSC+N SA AFA++++++QL F L VL R+++ Y D Sbjct: 34 SGIML--VFTAAFFICALVVASIDNAGFDVVLTGLLLCVWEVGAMWLLKRGPHDTSLGFLIGVTLVLNVITLMTAIYWGQLAGCDSDYDGDYDQYSCSNKSAMRGVAAFASIIWVLQLPFIYLLVQRRGVLTREDYATSGGRYAD 176 The following BLAST results are available for this feature:
BLAST of NO01G00510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 3
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00510 ID=NO01G00510|Name=NO01G00510|organism=Nannochloropsis oceanica|type=gene|length=1959bpback to top protein sequence of NO01G00510.1 >NO01G00510.1-protein ID=NO01G00510.1-protein|Name=NO01G00510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=192bpback to top Synonyms
Publications
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