scaffold60, scaffold60 (supercontig) Nannochloropsis salina

Overview
Namescaffold60
Unique Namescaffold60
Typesupercontig
OrganismNannochloropsis salina (N. salina CCMP1776)
Sequence length48928
Alignment locationNSK009093:109..462 +
Alignment locationNSK009093t:109..462 +
Alignment locationNSK009094:753..1797 +
Alignment locationNSK009094t:753..1797 +
Alignment locationNSK009095:1745..1957 +
Alignment locationNSK009095t:1745..1957 +
Alignment locationNSK009096:2217..8264 +
Alignment locationNSK009096t:2217..8264 +
Alignment locationNSK009097:9354..13669 +
Alignment locationNSK009097t:9354..13669 +
Alignment locationNSK009098:15254..19608 -
Alignment locationNSK009098t:15254..19608 -
Alignment locationNSK009099:19654..19968 -
Alignment locationNSK009099t:19654..19968 -
Alignment locationNSK009100:20473..21287 -
Alignment locationNSK009100t:20473..21287 -
Alignment locationNSK009101:20787..24950 -
Alignment locationNSK009101t:20787..24950 -
Alignment locationNSK009102:25901..26730 +
Alignment locationNSK009102t:25901..26730 +
Alignment locationNSK009103:26610..26851 -
Alignment locationNSK009103t:26610..26851 -
Alignment locationNSK009104:26796..27008 -
Alignment locationNSK009104t:26796..27008 -
Alignment locationNSK009105:27053..27455 -
Alignment locationNSK009105t:27053..27455 -
Alignment locationNSK009106:28359..33867 -
Alignment locationNSK009106t:28359..33867 -
Alignment locationNSK009107:34940..37380 +
Alignment locationNSK009107t:34940..37380 +
Alignment locationNSK009108:37482..37808 +
Alignment locationNSK009108t:37482..37808 +
Alignment locationNSK009109:37797..38013 +
Alignment locationNSK009109t:37797..38013 +
Alignment locationNSK009110:39000..44595 -
Alignment locationNSK009110t:39000..44595 -
Alignment locationNSK009111:45012..45242 +
Alignment locationNSK009111t:45012..45242 +
Alignment locationNSK009112:45352..46422 +
Alignment locationNSK009112t:45352..46422 +
Alignment locationNSK009113:47443..48873 +
Alignment locationNSK009113t:47443..48873 +
Alignment locationnonsR043:110..37380 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NSK009093geneNSK009093:109..462 +
NSK009093tmRNANSK009093t:109..462 +
NSK009094geneNSK009094:753..1797 +
NSK009094tmRNANSK009094t:753..1797 +
NSK009095geneNSK009095:1745..1957 +
NSK009095tmRNANSK009095t:1745..1957 +
NSK009096geneNSK009096:2217..8264 +
NSK009096tmRNANSK009096t:2217..8264 +
NSK009097geneNSK009097:9354..13669 +
NSK009097tmRNANSK009097t:9354..13669 +
NSK009098geneNSK009098:15254..19608 -
NSK009098tmRNANSK009098t:15254..19608 -
NSK009099geneNSK009099:19654..19968 -
NSK009099tmRNANSK009099t:19654..19968 -
NSK009100geneNSK009100:20473..21287 -
NSK009100tmRNANSK009100t:20473..21287 -
NSK009101geneNSK009101:20787..24950 -
NSK009101tmRNANSK009101t:20787..24950 -
NSK009102geneNSK009102:25901..26730 +
NSK009102tmRNANSK009102t:25901..26730 +
NSK009103geneNSK009103:26610..26851 -
NSK009103tmRNANSK009103t:26610..26851 -
NSK009104geneNSK009104:26796..27008 -
NSK009104tmRNANSK009104t:26796..27008 -
NSK009105geneNSK009105:27053..27455 -
NSK009105tmRNANSK009105t:27053..27455 -
NSK009106geneNSK009106:28359..33867 -
NSK009106tmRNANSK009106t:28359..33867 -
NSK009107geneNSK009107:34940..37380 +
NSK009107tmRNANSK009107t:34940..37380 +
NSK009108geneNSK009108:37482..37808 +
NSK009108tmRNANSK009108t:37482..37808 +
NSK009109geneNSK009109:37797..38013 +
NSK009109tmRNANSK009109t:37797..38013 +
NSK009110geneNSK009110:39000..44595 -
NSK009110tmRNANSK009110t:39000..44595 -
NSK009111geneNSK009111:45012..45242 +
NSK009111tmRNANSK009111t:45012..45242 +
NSK009112geneNSK009112:45352..46422 +
NSK009112tmRNANSK009112t:45352..46422 +
NSK009113geneNSK009113:47443..48873 +
NSK009113tmRNANSK009113t:47443..48873 +
nonsR043syntenic_regionnonsR043:110..37380 -
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Genome assembly for N. salina CCMP1776 (version 2)2019-10-08
Annotated Terms
Homology
Relationships
Sequences
Synonyms
Publications