scaffold58, scaffold58 (supercontig) Nannochloropsis salina

Overview
Namescaffold58
Unique Namescaffold58
Typesupercontig
OrganismNannochloropsis salina (N. salina CCMP1776)
Sequence length51346
Alignment locationNSK008554:224..1247 -
Alignment locationNSK008554t:224..1247 -
Alignment locationNSK008555:2370..3075 +
Alignment locationNSK008555t:2370..3075 +
Alignment locationNSK008556:3787..7815 -
Alignment locationNSK008556t:3787..7815 -
Alignment locationNSK008557:7924..10739 +
Alignment locationNSK008557t:7924..10739 +
Alignment locationNSK008558:12034..15431 +
Alignment locationNSK008558t:12034..15431 +
Alignment locationNSK008559:16060..16544 +
Alignment locationNSK008559t:16060..16544 +
Alignment locationNSK008560:16613..20323 +
Alignment locationNSK008560t:16613..20323 +
Alignment locationNSK008561:21211..23910 -
Alignment locationNSK008561t:21211..23910 -
Alignment locationNSK008562:25582..27990 -
Alignment locationNSK008562t:25582..27990 -
Alignment locationNSK008563:30042..30652 -
Alignment locationNSK008563t:30042..30652 -
Alignment locationNSK008564:31365..32979 -
Alignment locationNSK008564t:31365..32979 -
Alignment locationNSK008565:33966..38606 +
Alignment locationNSK008565t:33966..38606 +
Alignment locationNSK008566:39337..41520 -
Alignment locationNSK008566t:39337..41520 -
Alignment locationNSK008567:42165..42745 +
Alignment locationNSK008567t:42165..42745 +
Alignment locationNSK008568:45918..46637 +
Alignment locationNSK008568t:45918..46637 +
Alignment locationNSK008569:47406..50317 -
Alignment locationNSK008569t:47406..50317 -
Alignment locationNSK008570:49157..49778 +
Alignment locationNSK008570t:49157..49778 +
Alignment locationNSK008571:50361..50807 -
Alignment locationNSK008571t:50361..50807 -
Alignment locationnonsR149:7925..50317 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NSK008554geneNSK008554:224..1247 -
NSK008554tmRNANSK008554t:224..1247 -
NSK008555geneNSK008555:2370..3075 +
NSK008555tmRNANSK008555t:2370..3075 +
NSK008556geneNSK008556:3787..7815 -
NSK008556tmRNANSK008556t:3787..7815 -
NSK008557geneNSK008557:7924..10739 +
NSK008557tmRNANSK008557t:7924..10739 +
NSK008558geneNSK008558:12034..15431 +
NSK008558tmRNANSK008558t:12034..15431 +
NSK008559geneNSK008559:16060..16544 +
NSK008559tmRNANSK008559t:16060..16544 +
NSK008560geneNSK008560:16613..20323 +
NSK008560tmRNANSK008560t:16613..20323 +
NSK008561geneNSK008561:21211..23910 -
NSK008561tmRNANSK008561t:21211..23910 -
NSK008562geneNSK008562:25582..27990 -
NSK008562tmRNANSK008562t:25582..27990 -
NSK008563geneNSK008563:30042..30652 -
NSK008563tmRNANSK008563t:30042..30652 -
NSK008564geneNSK008564:31365..32979 -
NSK008564tmRNANSK008564t:31365..32979 -
NSK008565geneNSK008565:33966..38606 +
NSK008565tmRNANSK008565t:33966..38606 +
NSK008566geneNSK008566:39337..41520 -
NSK008566tmRNANSK008566t:39337..41520 -
NSK008567geneNSK008567:42165..42745 +
NSK008567tmRNANSK008567t:42165..42745 +
NSK008568geneNSK008568:45918..46637 +
NSK008568tmRNANSK008568t:45918..46637 +
NSK008569geneNSK008569:47406..50317 -
NSK008569tmRNANSK008569t:47406..50317 -
NSK008570geneNSK008570:49157..49778 +
NSK008570tmRNANSK008570t:49157..49778 +
NSK008571geneNSK008571:50361..50807 -
NSK008571tmRNANSK008571t:50361..50807 -
nonsR149syntenic_regionnonsR149:7925..50317 +
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Genome assembly for N. salina CCMP1776 (version 2)2019-10-08
Annotated Terms
Homology
Relationships
Sequences
Synonyms
Publications