scaffold56, scaffold56 (supercontig) Nannochloropsis salina

Overview
Namescaffold56
Unique Namescaffold56
Typesupercontig
OrganismNannochloropsis salina (N. salina CCMP1776)
Sequence length68927
Alignment locationNSK008503:569..3990 -
Alignment locationNSK008503t:569..3990 -
Alignment locationNSK008504:4136..4486 -
Alignment locationNSK008504t:4136..4486 -
Alignment locationNSK008505:4664..5305 +
Alignment locationNSK008505t:4664..5305 +
Alignment locationNSK008506:5846..6205 +
Alignment locationNSK008506t:5846..6205 +
Alignment locationNSK008507:7650..8294 -
Alignment locationNSK008507t:7650..8294 -
Alignment locationNSK008508:8527..11349 -
Alignment locationNSK008508t:8527..11349 -
Alignment locationNSK008509:12294..14374 +
Alignment locationNSK008509t:12294..14374 +
Alignment locationNSK008510:15185..15577 -
Alignment locationNSK008510t:15185..15577 -
Alignment locationNSK008511:15919..19532 +
Alignment locationNSK008511t:15919..19532 +
Alignment locationNSK008512:20221..21842 +
Alignment locationNSK008512t:20221..21842 +
Alignment locationNSK008513:23315..27505 +
Alignment locationNSK008513t:23315..27505 +
Alignment locationNSK008514:28255..31463 -
Alignment locationNSK008514t:28255..31463 -
Alignment locationNSK008515:29408..29726 -
Alignment locationNSK008515t:29408..29726 -
Alignment locationNSK008516:32112..33615 -
Alignment locationNSK008516t:32112..33615 -
Alignment locationNSK008517:34413..35814 +
Alignment locationNSK008517t:34413..35814 +
Alignment locationNSK008518:36832..38825 -
Alignment locationNSK008518t:36832..38825 -
Alignment locationNSK008519:37651..37938 -
Alignment locationNSK008519t:37651..37938 -
Alignment locationNSK008520:39683..42737 -
Alignment locationNSK008520t:39683..42737 -
Alignment locationNSK008521:42783..43536 -
Alignment locationNSK008521t:42783..43536 -
Alignment locationNSK008522:44723..47069 +
Alignment locationNSK008522t:44723..47069 +
Alignment locationNSK008523:48278..49494 -
Alignment locationNSK008523t:48278..49494 -
Alignment locationNSK008524:50257..52826 -
Alignment locationNSK008524t:50257..52826 -
Alignment locationNSK008525:51149..52099 +
Alignment locationNSK008525t:51149..52099 +
Alignment locationNSK008526:53131..53397 +
Alignment locationNSK008526t:53131..53397 +
Alignment locationNSK008527:53651..54974 +
Alignment locationNSK008527t:53651..54974 +
Alignment locationNSK008528:55371..59295 -
Alignment locationNSK008528t:55371..59295 -
Alignment locationNSK008529:60666..63545 +
Alignment locationNSK008529t:60666..63545 +
Alignment locationNSK008530:62975..64616 +
Alignment locationNSK008530t:62975..64616 +
Alignment locationNSK008531:66020..68768 -
Alignment locationNSK008531t:66020..68768 -
Alignment locationnonsR111:15920..68768 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NSK008503geneNSK008503:569..3990 -
NSK008503tmRNANSK008503t:569..3990 -
NSK008504geneNSK008504:4136..4486 -
NSK008504tmRNANSK008504t:4136..4486 -
NSK008505geneNSK008505:4664..5305 +
NSK008505tmRNANSK008505t:4664..5305 +
NSK008506geneNSK008506:5846..6205 +
NSK008506tmRNANSK008506t:5846..6205 +
NSK008507geneNSK008507:7650..8294 -
NSK008507tmRNANSK008507t:7650..8294 -
NSK008508geneNSK008508:8527..11349 -
NSK008508tmRNANSK008508t:8527..11349 -
NSK008509geneNSK008509:12294..14374 +
NSK008509tmRNANSK008509t:12294..14374 +
NSK008510geneNSK008510:15185..15577 -
NSK008510tmRNANSK008510t:15185..15577 -
NSK008511geneNSK008511:15919..19532 +
NSK008511tmRNANSK008511t:15919..19532 +
NSK008512geneNSK008512:20221..21842 +
NSK008512tmRNANSK008512t:20221..21842 +
NSK008513geneNSK008513:23315..27505 +
NSK008513tmRNANSK008513t:23315..27505 +
NSK008514geneNSK008514:28255..31463 -
NSK008514tmRNANSK008514t:28255..31463 -
NSK008515geneNSK008515:29408..29726 -
NSK008515tmRNANSK008515t:29408..29726 -
NSK008516geneNSK008516:32112..33615 -
NSK008516tmRNANSK008516t:32112..33615 -
NSK008517geneNSK008517:34413..35814 +
NSK008517tmRNANSK008517t:34413..35814 +
NSK008518geneNSK008518:36832..38825 -
NSK008518tmRNANSK008518t:36832..38825 -
NSK008519geneNSK008519:37651..37938 -
NSK008519tmRNANSK008519t:37651..37938 -
NSK008520geneNSK008520:39683..42737 -
NSK008520tmRNANSK008520t:39683..42737 -
NSK008521geneNSK008521:42783..43536 -
NSK008521tmRNANSK008521t:42783..43536 -
NSK008522geneNSK008522:44723..47069 +
NSK008522tmRNANSK008522t:44723..47069 +
NSK008523geneNSK008523:48278..49494 -
NSK008523tmRNANSK008523t:48278..49494 -
NSK008524geneNSK008524:50257..52826 -
NSK008524tmRNANSK008524t:50257..52826 -
NSK008525geneNSK008525:51149..52099 +
NSK008525tmRNANSK008525t:51149..52099 +
NSK008526geneNSK008526:53131..53397 +
NSK008526tmRNANSK008526t:53131..53397 +
NSK008527geneNSK008527:53651..54974 +
NSK008527tmRNANSK008527t:53651..54974 +
NSK008528geneNSK008528:55371..59295 -
NSK008528tmRNANSK008528t:55371..59295 -
NSK008529geneNSK008529:60666..63545 +
NSK008529tmRNANSK008529t:60666..63545 +
NSK008530geneNSK008530:62975..64616 +
NSK008530tmRNANSK008530t:62975..64616 +
NSK008531geneNSK008531:66020..68768 -
NSK008531tmRNANSK008531t:66020..68768 -
nonsR111syntenic_regionnonsR111:15920..68768 -
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Genome assembly for N. salina CCMP1776 (version 2)2019-10-08
Annotated Terms
Homology
Relationships
Sequences
Synonyms
Publications