scaffold54, scaffold54 (supercontig) Nannochloropsis salina

Overview
Namescaffold54
Unique Namescaffold54
Typesupercontig
OrganismNannochloropsis salina (N. salina CCMP1776)
Sequence length57446
Alignment locationNSK008463:1137..4360 -
Alignment locationNSK008463t:1137..4360 -
Alignment locationNSK008464:5257..6865 -
Alignment locationNSK008464t:5257..6865 -
Alignment locationNSK008465:7095..7883 -
Alignment locationNSK008465t:7095..7883 -
Alignment locationNSK008466:7891..8436 -
Alignment locationNSK008466t:7891..8436 -
Alignment locationNSK008467:9805..14178 -
Alignment locationNSK008467t:9805..14178 -
Alignment locationNSK008468:17373..20360 +
Alignment locationNSK008468t:17373..20360 +
Alignment locationNSK008469:17425..17944 +
Alignment locationNSK008469t:17425..17944 +
Alignment locationNSK008470:19321..21069 -
Alignment locationNSK008470t:19321..21069 -
Alignment locationNSK008471:21120..22387 +
Alignment locationNSK008471t:21120..22387 +
Alignment locationNSK008472:22924..24731 -
Alignment locationNSK008472t:22924..24731 -
Alignment locationNSK008473:25502..26233 +
Alignment locationNSK008473t:25502..26233 +
Alignment locationNSK008474:27257..27733 +
Alignment locationNSK008474t:27257..27733 +
Alignment locationNSK008475:28126..29076 -
Alignment locationNSK008475t:28126..29076 -
Alignment locationNSK008476:30877..31094 +
Alignment locationNSK008476t:30877..31094 +
Alignment locationNSK008477:31444..32172 -
Alignment locationNSK008477t:31444..32172 -
Alignment locationNSK008478:32230..37015 +
Alignment locationNSK008478t:32230..37015 +
Alignment locationNSK008479:33813..34257 -
Alignment locationNSK008479t:33813..34257 -
Alignment locationNSK008480:41126..44076 +
Alignment locationNSK008480t:41126..44076 +
Alignment locationNSK008481:44240..45373 +
Alignment locationNSK008481t:44240..45373 +
Alignment locationNSK008482:46572..49603 -
Alignment locationNSK008482t:46572..49603 -
Alignment locationNSK008483:51115..51361 -
Alignment locationNSK008483t:51115..51361 -
Alignment locationNSK008484:54483..57237 +
Alignment locationNSK008484t:54483..57237 +
Alignment locationnonsR037:1138..49603 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NSK008463geneNSK008463:1137..4360 -
NSK008463tmRNANSK008463t:1137..4360 -
NSK008464geneNSK008464:5257..6865 -
NSK008464tmRNANSK008464t:5257..6865 -
NSK008465geneNSK008465:7095..7883 -
NSK008465tmRNANSK008465t:7095..7883 -
NSK008466geneNSK008466:7891..8436 -
NSK008466tmRNANSK008466t:7891..8436 -
NSK008467geneNSK008467:9805..14178 -
NSK008467tmRNANSK008467t:9805..14178 -
NSK008468geneNSK008468:17373..20360 +
NSK008468tmRNANSK008468t:17373..20360 +
NSK008469geneNSK008469:17425..17944 +
NSK008469tmRNANSK008469t:17425..17944 +
NSK008470geneNSK008470:19321..21069 -
NSK008470tmRNANSK008470t:19321..21069 -
NSK008471geneNSK008471:21120..22387 +
NSK008471tmRNANSK008471t:21120..22387 +
NSK008472geneNSK008472:22924..24731 -
NSK008472tmRNANSK008472t:22924..24731 -
NSK008473geneNSK008473:25502..26233 +
NSK008473tmRNANSK008473t:25502..26233 +
NSK008474geneNSK008474:27257..27733 +
NSK008474tmRNANSK008474t:27257..27733 +
NSK008475geneNSK008475:28126..29076 -
NSK008475tmRNANSK008475t:28126..29076 -
NSK008476geneNSK008476:30877..31094 +
NSK008476tmRNANSK008476t:30877..31094 +
NSK008477geneNSK008477:31444..32172 -
NSK008477tmRNANSK008477t:31444..32172 -
NSK008478geneNSK008478:32230..37015 +
NSK008478tmRNANSK008478t:32230..37015 +
NSK008479geneNSK008479:33813..34257 -
NSK008479tmRNANSK008479t:33813..34257 -
NSK008480geneNSK008480:41126..44076 +
NSK008480tmRNANSK008480t:41126..44076 +
NSK008481geneNSK008481:44240..45373 +
NSK008481tmRNANSK008481t:44240..45373 +
NSK008482geneNSK008482:46572..49603 -
NSK008482tmRNANSK008482t:46572..49603 -
NSK008483geneNSK008483:51115..51361 -
NSK008483tmRNANSK008483t:51115..51361 -
NSK008484geneNSK008484:54483..57237 +
NSK008484tmRNANSK008484t:54483..57237 +
nonsR037syntenic_regionnonsR037:1138..49603 -
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Genome assembly for N. salina CCMP1776 (version 2)2019-10-08
Annotated Terms
Homology
Relationships
Sequences
Synonyms
Publications