scaffold53, scaffold53 (supercontig) Nannochloropsis salina

Overview
Namescaffold53
Unique Namescaffold53
Typesupercontig
OrganismNannochloropsis salina (N. salina CCMP1776)
Sequence length100380
Alignment locationNSK008422:17..1176 -
Alignment locationNSK008422t:17..1176 -
Alignment locationNSK008423:1051..1340 +
Alignment locationNSK008423t:1051..1340 +
Alignment locationNSK008424:1299..1968 -
Alignment locationNSK008424t:1299..1968 -
Alignment locationNSK008425:1337..1585 -
Alignment locationNSK008425t:1337..1585 -
Alignment locationNSK008426:2784..5077 +
Alignment locationNSK008426t:2784..5077 +
Alignment locationNSK008427:6400..6774 +
Alignment locationNSK008427t:6400..6774 +
Alignment locationNSK008428:6530..8982 -
Alignment locationNSK008428t:6530..8982 -
Alignment locationNSK008429:9079..10170 +
Alignment locationNSK008429t:9079..10170 +
Alignment locationNSK008430:10536..12812 +
Alignment locationNSK008430t:10536..12812 +
Alignment locationNSK008431:13446..14643 -
Alignment locationNSK008431t:13446..14643 -
Alignment locationNSK008432:14682..15099 +
Alignment locationNSK008432t:14682..15099 +
Alignment locationNSK008433:15608..16906 +
Alignment locationNSK008433t:15608..16906 +
Alignment locationNSK008434:17356..22048 -
Alignment locationNSK008434t:17356..22048 -
Alignment locationNSK008435:17982..18325 +
Alignment locationNSK008435t:17982..18325 +
Alignment locationNSK008436:24026..24610 -
Alignment locationNSK008436t:24026..24610 -
Alignment locationNSK008437:24547..26222 -
Alignment locationNSK008437t:24547..26222 -
Alignment locationNSK008438:26680..28231 +
Alignment locationNSK008438t:26680..28231 +
Alignment locationNSK008439:29535..29866 -
Alignment locationNSK008439t:29535..29866 -
Alignment locationNSK008440:30141..32697 -
Alignment locationNSK008440t:30141..32697 -
Alignment locationNSK008441:33173..34593 +
Alignment locationNSK008441t:33173..34593 +
Alignment locationNSK008442:34936..37171 +
Alignment locationNSK008442t:34936..37171 +
Alignment locationNSK008443:37203..40566 -
Alignment locationNSK008443t:37203..40566 -
Alignment locationNSK008444:41879..42721 +
Alignment locationNSK008444t:41879..42721 +
Alignment locationNSK008445:43257..45167 +
Alignment locationNSK008445t:43257..45167 +
Alignment locationNSK008446:46220..47326 -
Alignment locationNSK008446t:46220..47326 -
Alignment locationNSK008447:47898..48987 +
Alignment locationNSK008447t:47898..48987 +
Alignment locationNSK008448:50365..51650 +
Alignment locationNSK008448t:50365..51650 +
Alignment locationNSK008449:52427..55940 -
Alignment locationNSK008449t:52427..55940 -
Alignment locationNSK008450:56576..58644 -
Alignment locationNSK008450t:56576..58644 -
Alignment locationNSK008451:59499..60315 +
Alignment locationNSK008451t:59499..60315 +
Alignment locationNSK008452:61989..65178 -
Alignment locationNSK008452t:61989..65178 -
Alignment locationNSK008453:66989..68761 +
Alignment locationNSK008453t:66989..68761 +
Alignment locationNSK008454:69628..70524 -
Alignment locationNSK008454t:69628..70524 -
Alignment locationNSK008455:72089..77534 -
Alignment locationNSK008455t:72089..77534 -
Alignment locationNSK008456:78559..82666 +
Alignment locationNSK008456t:78559..82666 +
Alignment locationNSK008457:83190..89072 -
Alignment locationNSK008457t:83190..89072 -
Alignment locationNSK008458:90072..90726 +
Alignment locationNSK008458t:90072..90726 +
Alignment locationNSK008459:91007..91767 -
Alignment locationNSK008459t:91007..91767 -
Alignment locationNSK008460:91340..92966 +
Alignment locationNSK008460t:91340..92966 +
Alignment locationNSK008461:92833..93194 -
Alignment locationNSK008461t:92833..93194 -
Alignment locationNSK008462:96776..99417 +
Alignment locationNSK008462t:96776..99417 +
Alignment locationnonsR159:18..89072 +
Alignment locationnonsR160:18..22048 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NSK008422geneNSK008422:17..1176 -
NSK008422tmRNANSK008422t:17..1176 -
NSK008423geneNSK008423:1051..1340 +
NSK008423tmRNANSK008423t:1051..1340 +
NSK008424geneNSK008424:1299..1968 -
NSK008424tmRNANSK008424t:1299..1968 -
NSK008425geneNSK008425:1337..1585 -
NSK008425tmRNANSK008425t:1337..1585 -
NSK008426geneNSK008426:2784..5077 +
NSK008426tmRNANSK008426t:2784..5077 +
NSK008427geneNSK008427:6400..6774 +
NSK008427tmRNANSK008427t:6400..6774 +
NSK008428geneNSK008428:6530..8982 -
NSK008428tmRNANSK008428t:6530..8982 -
NSK008429geneNSK008429:9079..10170 +
NSK008429tmRNANSK008429t:9079..10170 +
NSK008430geneNSK008430:10536..12812 +
NSK008430tmRNANSK008430t:10536..12812 +
NSK008431geneNSK008431:13446..14643 -
NSK008431tmRNANSK008431t:13446..14643 -
NSK008432geneNSK008432:14682..15099 +
NSK008432tmRNANSK008432t:14682..15099 +
NSK008433geneNSK008433:15608..16906 +
NSK008433tmRNANSK008433t:15608..16906 +
NSK008434geneNSK008434:17356..22048 -
NSK008434tmRNANSK008434t:17356..22048 -
NSK008435geneNSK008435:17982..18325 +
NSK008435tmRNANSK008435t:17982..18325 +
NSK008436geneNSK008436:24026..24610 -
NSK008436tmRNANSK008436t:24026..24610 -
NSK008437geneNSK008437:24547..26222 -
NSK008437tmRNANSK008437t:24547..26222 -
NSK008438geneNSK008438:26680..28231 +
NSK008438tmRNANSK008438t:26680..28231 +
NSK008439geneNSK008439:29535..29866 -
NSK008439tmRNANSK008439t:29535..29866 -
NSK008440geneNSK008440:30141..32697 -
NSK008440tmRNANSK008440t:30141..32697 -
NSK008441geneNSK008441:33173..34593 +
NSK008441tmRNANSK008441t:33173..34593 +
NSK008442geneNSK008442:34936..37171 +
NSK008442tmRNANSK008442t:34936..37171 +
NSK008443geneNSK008443:37203..40566 -
NSK008443tmRNANSK008443t:37203..40566 -
NSK008444geneNSK008444:41879..42721 +
NSK008444tmRNANSK008444t:41879..42721 +
NSK008445geneNSK008445:43257..45167 +
NSK008445tmRNANSK008445t:43257..45167 +
NSK008446geneNSK008446:46220..47326 -
NSK008446tmRNANSK008446t:46220..47326 -
NSK008447geneNSK008447:47898..48987 +
NSK008447tmRNANSK008447t:47898..48987 +
NSK008448geneNSK008448:50365..51650 +
NSK008448tmRNANSK008448t:50365..51650 +
NSK008449geneNSK008449:52427..55940 -
NSK008449tmRNANSK008449t:52427..55940 -
NSK008450geneNSK008450:56576..58644 -
NSK008450tmRNANSK008450t:56576..58644 -
NSK008451geneNSK008451:59499..60315 +
NSK008451tmRNANSK008451t:59499..60315 +
NSK008452geneNSK008452:61989..65178 -
NSK008452tmRNANSK008452t:61989..65178 -
NSK008453geneNSK008453:66989..68761 +
NSK008453tmRNANSK008453t:66989..68761 +
NSK008454geneNSK008454:69628..70524 -
NSK008454tmRNANSK008454t:69628..70524 -
NSK008455geneNSK008455:72089..77534 -
NSK008455tmRNANSK008455t:72089..77534 -
NSK008456geneNSK008456:78559..82666 +
NSK008456tmRNANSK008456t:78559..82666 +
NSK008457geneNSK008457:83190..89072 -
NSK008457tmRNANSK008457t:83190..89072 -
NSK008458geneNSK008458:90072..90726 +
NSK008458tmRNANSK008458t:90072..90726 +
NSK008459geneNSK008459:91007..91767 -
NSK008459tmRNANSK008459t:91007..91767 -
NSK008460geneNSK008460:91340..92966 +
NSK008460tmRNANSK008460t:91340..92966 +
NSK008461geneNSK008461:92833..93194 -
NSK008461tmRNANSK008461t:92833..93194 -
NSK008462geneNSK008462:96776..99417 +
NSK008462tmRNANSK008462t:96776..99417 +
nonsR159syntenic_regionnonsR159:18..89072 +
nonsR160syntenic_regionnonsR160:18..22048 -
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Genome assembly for N. salina CCMP1776 (version 2)2019-10-08
Annotated Terms
Homology
Relationships
Sequences
Synonyms
Publications