scaffold51, scaffold51 (supercontig) Nannochloropsis salina

Overview
Namescaffold51
Unique Namescaffold51
Typesupercontig
OrganismNannochloropsis salina (N. salina CCMP1776)
Sequence length65578
Alignment locationNSK008379:100..2045 -
Alignment locationNSK008379t:100..2045 -
Alignment locationNSK008380:3848..4182 +
Alignment locationNSK008380t:3848..4182 +
Alignment locationNSK008381:6295..21739 -
Alignment locationNSK008381t:6295..21739 -
Alignment locationNSK008382:7709..8365 -
Alignment locationNSK008382t:7709..8365 -
Alignment locationNSK008383:27445..28305 +
Alignment locationNSK008383t:27445..28305 +
Alignment locationNSK008384:28513..29537 +
Alignment locationNSK008384t:28513..29537 +
Alignment locationNSK008385:30537..32114 -
Alignment locationNSK008385t:30537..32114 -
Alignment locationNSK008386:32922..35568 -
Alignment locationNSK008386t:32922..35568 -
Alignment locationNSK008387:36018..38211 +
Alignment locationNSK008387t:36018..38211 +
Alignment locationNSK008388:38507..42685 +
Alignment locationNSK008388t:38507..42685 +
Alignment locationNSK008389:42900..43183 +
Alignment locationNSK008389t:42900..43183 +
Alignment locationNSK008390:43149..45775 -
Alignment locationNSK008390t:43149..45775 -
Alignment locationNSK008391:46464..49181 -
Alignment locationNSK008391t:46464..49181 -
Alignment locationNSK008392:49949..50897 +
Alignment locationNSK008392t:49949..50897 +
Alignment locationNSK008393:51778..54796 -
Alignment locationNSK008393t:51778..54796 -
Alignment locationNSK008394:54969..55713 +
Alignment locationNSK008394t:54969..55713 +
Alignment locationNSK008395:55761..56885 +
Alignment locationNSK008395t:55761..56885 +
Alignment locationNSK008396:56962..58437 +
Alignment locationNSK008396t:56962..58437 +
Alignment locationNSK008397:58682..59169 +
Alignment locationNSK008397t:58682..59169 +
Alignment locationNSK008398:59718..61333 -
Alignment locationNSK008398t:59718..61333 -
Alignment locationNSK008399:62583..63916 -
Alignment locationNSK008399t:62583..63916 -
Alignment locationnonsR064:30538..63916 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NSK008379geneNSK008379:100..2045 -
NSK008379tmRNANSK008379t:100..2045 -
NSK008380geneNSK008380:3848..4182 +
NSK008380tmRNANSK008380t:3848..4182 +
NSK008381geneNSK008381:6295..21739 -
NSK008381tmRNANSK008381t:6295..21739 -
NSK008382geneNSK008382:7709..8365 -
NSK008382tmRNANSK008382t:7709..8365 -
NSK008383geneNSK008383:27445..28305 +
NSK008383tmRNANSK008383t:27445..28305 +
NSK008384geneNSK008384:28513..29537 +
NSK008384tmRNANSK008384t:28513..29537 +
NSK008385geneNSK008385:30537..32114 -
NSK008385tmRNANSK008385t:30537..32114 -
NSK008386geneNSK008386:32922..35568 -
NSK008386tmRNANSK008386t:32922..35568 -
NSK008387geneNSK008387:36018..38211 +
NSK008387tmRNANSK008387t:36018..38211 +
NSK008388geneNSK008388:38507..42685 +
NSK008388tmRNANSK008388t:38507..42685 +
NSK008389geneNSK008389:42900..43183 +
NSK008389tmRNANSK008389t:42900..43183 +
NSK008390geneNSK008390:43149..45775 -
NSK008390tmRNANSK008390t:43149..45775 -
NSK008391geneNSK008391:46464..49181 -
NSK008391tmRNANSK008391t:46464..49181 -
NSK008392geneNSK008392:49949..50897 +
NSK008392tmRNANSK008392t:49949..50897 +
NSK008393geneNSK008393:51778..54796 -
NSK008393tmRNANSK008393t:51778..54796 -
NSK008394geneNSK008394:54969..55713 +
NSK008394tmRNANSK008394t:54969..55713 +
NSK008395geneNSK008395:55761..56885 +
NSK008395tmRNANSK008395t:55761..56885 +
NSK008396geneNSK008396:56962..58437 +
NSK008396tmRNANSK008396t:56962..58437 +
NSK008397geneNSK008397:58682..59169 +
NSK008397tmRNANSK008397t:58682..59169 +
NSK008398geneNSK008398:59718..61333 -
NSK008398tmRNANSK008398t:59718..61333 -
NSK008399geneNSK008399:62583..63916 -
NSK008399tmRNANSK008399t:62583..63916 -
nonsR064syntenic_regionnonsR064:30538..63916 +
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Genome assembly for N. salina CCMP1776 (version 2)2019-10-08
Annotated Terms
Homology
Relationships
Sequences
Synonyms
Publications