scaffold50, scaffold50 (supercontig) Nannochloropsis salina

Overview
Namescaffold50
Unique Namescaffold50
Typesupercontig
OrganismNannochloropsis salina (N. salina CCMP1776)
Sequence length69270
Alignment locationNSK008349:466..1950 -
Alignment locationNSK008349t:466..1950 -
Alignment locationNSK008350:2641..4290 -
Alignment locationNSK008350t:2641..4290 -
Alignment locationNSK008351:5366..9077 -
Alignment locationNSK008351t:5366..9077 -
Alignment locationNSK008352:9490..10450 -
Alignment locationNSK008352t:9490..10450 -
Alignment locationNSK008353:11944..12215 +
Alignment locationNSK008353t:11944..12215 +
Alignment locationNSK008354:12444..13884 -
Alignment locationNSK008354t:12444..13884 -
Alignment locationNSK008355:14410..14981 +
Alignment locationNSK008355t:14410..14981 +
Alignment locationNSK008356:14944..15248 +
Alignment locationNSK008356t:14944..15248 +
Alignment locationNSK008357:15600..19464 -
Alignment locationNSK008357t:15600..19464 -
Alignment locationNSK008358:15729..15984 -
Alignment locationNSK008358t:15729..15984 -
Alignment locationNSK008359:21602..25753 +
Alignment locationNSK008359t:21602..25753 +
Alignment locationNSK008360:27258..31381 -
Alignment locationNSK008360t:27258..31381 -
Alignment locationNSK008361:30621..31726 +
Alignment locationNSK008361t:30621..31726 +
Alignment locationNSK008362:34516..38099 +
Alignment locationNSK008362t:34516..38099 +
Alignment locationNSK008363:39278..41113 +
Alignment locationNSK008363t:39278..41113 +
Alignment locationNSK008364:41725..43416 -
Alignment locationNSK008364t:41725..43416 -
Alignment locationNSK008365:43975..44391 +
Alignment locationNSK008365t:43975..44391 +
Alignment locationNSK008366:44425..45897 -
Alignment locationNSK008366t:44425..45897 -
Alignment locationNSK008367:46287..46489 -
Alignment locationNSK008367t:46287..46489 -
Alignment locationNSK008368:46459..46988 -
Alignment locationNSK008368t:46459..46988 -
Alignment locationNSK008369:47013..47692 +
Alignment locationNSK008369t:47013..47692 +
Alignment locationNSK008370:47892..48590 -
Alignment locationNSK008370t:47892..48590 -
Alignment locationNSK008371:51910..59234 +
Alignment locationNSK008371t:51910..59234 +
Alignment locationNSK008372:59688..60325 +
Alignment locationNSK008372t:59688..60325 +
Alignment locationNSK008373:60352..60865 +
Alignment locationNSK008373t:60352..60865 +
Alignment locationNSK008374:60647..62556 +
Alignment locationNSK008374t:60647..62556 +
Alignment locationNSK008375:62891..63290 +
Alignment locationNSK008375t:62891..63290 +
Alignment locationNSK008376:63311..65221 -
Alignment locationNSK008376t:63311..65221 -
Alignment locationNSK008377:63522..64634 -
Alignment locationNSK008377t:63522..64634 -
Alignment locationNSK008378:65893..68594 -
Alignment locationNSK008378t:65893..68594 -
Alignment locationnonsR036:467..31381 -
Alignment locationnonsR118:34517..68594 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NSK008349geneNSK008349:466..1950 -
NSK008349tmRNANSK008349t:466..1950 -
NSK008350geneNSK008350:2641..4290 -
NSK008350tmRNANSK008350t:2641..4290 -
NSK008351geneNSK008351:5366..9077 -
NSK008351tmRNANSK008351t:5366..9077 -
NSK008352geneNSK008352:9490..10450 -
NSK008352tmRNANSK008352t:9490..10450 -
NSK008353geneNSK008353:11944..12215 +
NSK008353tmRNANSK008353t:11944..12215 +
NSK008354geneNSK008354:12444..13884 -
NSK008354tmRNANSK008354t:12444..13884 -
NSK008355geneNSK008355:14410..14981 +
NSK008355tmRNANSK008355t:14410..14981 +
NSK008356geneNSK008356:14944..15248 +
NSK008356tmRNANSK008356t:14944..15248 +
NSK008357geneNSK008357:15600..19464 -
NSK008357tmRNANSK008357t:15600..19464 -
NSK008358geneNSK008358:15729..15984 -
NSK008358tmRNANSK008358t:15729..15984 -
NSK008359geneNSK008359:21602..25753 +
NSK008359tmRNANSK008359t:21602..25753 +
NSK008360geneNSK008360:27258..31381 -
NSK008360tmRNANSK008360t:27258..31381 -
NSK008361geneNSK008361:30621..31726 +
NSK008361tmRNANSK008361t:30621..31726 +
NSK008362geneNSK008362:34516..38099 +
NSK008362tmRNANSK008362t:34516..38099 +
NSK008363geneNSK008363:39278..41113 +
NSK008363tmRNANSK008363t:39278..41113 +
NSK008364geneNSK008364:41725..43416 -
NSK008364tmRNANSK008364t:41725..43416 -
NSK008365geneNSK008365:43975..44391 +
NSK008365tmRNANSK008365t:43975..44391 +
NSK008366geneNSK008366:44425..45897 -
NSK008366tmRNANSK008366t:44425..45897 -
NSK008367geneNSK008367:46287..46489 -
NSK008367tmRNANSK008367t:46287..46489 -
NSK008368geneNSK008368:46459..46988 -
NSK008368tmRNANSK008368t:46459..46988 -
NSK008369geneNSK008369:47013..47692 +
NSK008369tmRNANSK008369t:47013..47692 +
NSK008370geneNSK008370:47892..48590 -
NSK008370tmRNANSK008370t:47892..48590 -
NSK008371geneNSK008371:51910..59234 +
NSK008371tmRNANSK008371t:51910..59234 +
NSK008372geneNSK008372:59688..60325 +
NSK008372tmRNANSK008372t:59688..60325 +
NSK008373geneNSK008373:60352..60865 +
NSK008373tmRNANSK008373t:60352..60865 +
NSK008374geneNSK008374:60647..62556 +
NSK008374tmRNANSK008374t:60647..62556 +
NSK008375geneNSK008375:62891..63290 +
NSK008375tmRNANSK008375t:62891..63290 +
NSK008376geneNSK008376:63311..65221 -
NSK008376tmRNANSK008376t:63311..65221 -
NSK008377geneNSK008377:63522..64634 -
NSK008377tmRNANSK008377t:63522..64634 -
NSK008378geneNSK008378:65893..68594 -
NSK008378tmRNANSK008378t:65893..68594 -
nonsR036syntenic_regionnonsR036:467..31381 -
nonsR118syntenic_regionnonsR118:34517..68594 -
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Genome assembly for N. salina CCMP1776 (version 2)2019-10-08
Annotated Terms
Homology
Relationships
Sequences
Synonyms
Publications