scaffold47, scaffold47 (supercontig) Nannochloropsis salina

Overview
Namescaffold47
Unique Namescaffold47
Typesupercontig
OrganismNannochloropsis salina (N. salina CCMP1776)
Sequence length75525
Alignment locationNSK007629:372..1963 +
Alignment locationNSK007629t:372..1963 +
Alignment locationNSK007630:3093..4711 -
Alignment locationNSK007630t:3093..4711 -
Alignment locationNSK007631:5179..5773 +
Alignment locationNSK007631t:5179..5773 +
Alignment locationNSK007632:6263..9099 +
Alignment locationNSK007632t:6263..9099 +
Alignment locationNSK007633:10544..10964 -
Alignment locationNSK007633t:10544..10964 -
Alignment locationNSK007634:11338..12504 +
Alignment locationNSK007634t:11338..12504 +
Alignment locationNSK007635:11588..14105 +
Alignment locationNSK007635t:11588..14105 +
Alignment locationNSK007636:13103..13422 +
Alignment locationNSK007636t:13103..13422 +
Alignment locationNSK007637:14344..14563 -
Alignment locationNSK007637t:14344..14563 -
Alignment locationNSK007638:15337..17939 +
Alignment locationNSK007638t:15337..17939 +
Alignment locationNSK007639:19857..21302 +
Alignment locationNSK007639t:19857..21302 +
Alignment locationNSK007640:21722..22334 -
Alignment locationNSK007640t:21722..22334 -
Alignment locationNSK007641:22367..27064 -
Alignment locationNSK007641t:22367..27064 -
Alignment locationNSK007642:27471..27788 -
Alignment locationNSK007642t:27471..27788 -
Alignment locationNSK007643:28288..30771 +
Alignment locationNSK007643t:28288..30771 +
Alignment locationNSK007644:31925..34758 +
Alignment locationNSK007644t:31925..34758 +
Alignment locationNSK007645:35790..37686 -
Alignment locationNSK007645t:35790..37686 -
Alignment locationNSK007646:40753..41982 +
Alignment locationNSK007646t:40753..41982 +
Alignment locationNSK007647:43693..46949 -
Alignment locationNSK007647t:43693..46949 -
Alignment locationNSK007648:48219..48455 +
Alignment locationNSK007648t:48219..48455 +
Alignment locationNSK007649:59882..60269 +
Alignment locationNSK007649t:59882..60269 +
Alignment locationNSK007650:60658..64222 -
Alignment locationNSK007650t:60658..64222 -
Alignment locationNSK007651:66067..73203 -
Alignment locationNSK007651t:66067..73203 -
Alignment locationNSK007652:73829..75446 -
Alignment locationNSK007652t:73829..75446 -
Alignment locationnonsR130:373..75446 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NSK007629geneNSK007629:372..1963 +
NSK007629tmRNANSK007629t:372..1963 +
NSK007630geneNSK007630:3093..4711 -
NSK007630tmRNANSK007630t:3093..4711 -
NSK007631geneNSK007631:5179..5773 +
NSK007631tmRNANSK007631t:5179..5773 +
NSK007632geneNSK007632:6263..9099 +
NSK007632tmRNANSK007632t:6263..9099 +
NSK007633geneNSK007633:10544..10964 -
NSK007633tmRNANSK007633t:10544..10964 -
NSK007634geneNSK007634:11338..12504 +
NSK007634tmRNANSK007634t:11338..12504 +
NSK007635geneNSK007635:11588..14105 +
NSK007635tmRNANSK007635t:11588..14105 +
NSK007636geneNSK007636:13103..13422 +
NSK007636tmRNANSK007636t:13103..13422 +
NSK007637geneNSK007637:14344..14563 -
NSK007637tmRNANSK007637t:14344..14563 -
NSK007638geneNSK007638:15337..17939 +
NSK007638tmRNANSK007638t:15337..17939 +
NSK007639geneNSK007639:19857..21302 +
NSK007639tmRNANSK007639t:19857..21302 +
NSK007640geneNSK007640:21722..22334 -
NSK007640tmRNANSK007640t:21722..22334 -
NSK007641geneNSK007641:22367..27064 -
NSK007641tmRNANSK007641t:22367..27064 -
NSK007642geneNSK007642:27471..27788 -
NSK007642tmRNANSK007642t:27471..27788 -
NSK007643geneNSK007643:28288..30771 +
NSK007643tmRNANSK007643t:28288..30771 +
NSK007644geneNSK007644:31925..34758 +
NSK007644tmRNANSK007644t:31925..34758 +
NSK007645geneNSK007645:35790..37686 -
NSK007645tmRNANSK007645t:35790..37686 -
NSK007646geneNSK007646:40753..41982 +
NSK007646tmRNANSK007646t:40753..41982 +
NSK007647geneNSK007647:43693..46949 -
NSK007647tmRNANSK007647t:43693..46949 -
NSK007648geneNSK007648:48219..48455 +
NSK007648tmRNANSK007648t:48219..48455 +
NSK007649geneNSK007649:59882..60269 +
NSK007649tmRNANSK007649t:59882..60269 +
NSK007650geneNSK007650:60658..64222 -
NSK007650tmRNANSK007650t:60658..64222 -
NSK007651geneNSK007651:66067..73203 -
NSK007651tmRNANSK007651t:66067..73203 -
NSK007652geneNSK007652:73829..75446 -
NSK007652tmRNANSK007652t:73829..75446 -
nonsR130syntenic_regionnonsR130:373..75446 +
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Genome assembly for N. salina CCMP1776 (version 2)2019-10-08
Annotated Terms
Homology
Relationships
Sequences
Synonyms
Publications