scaffold45, scaffold45 (supercontig) Nannochloropsis salina

Overview
Namescaffold45
Unique Namescaffold45
Typesupercontig
OrganismNannochloropsis salina (N. salina CCMP1776)
Sequence length85014
Alignment locationNSK007548:62..5882 +
Alignment locationNSK007548t:62..5882 +
Alignment locationNSK007549:6373..7098 -
Alignment locationNSK007549t:6373..7098 -
Alignment locationNSK007550:7403..7855 -
Alignment locationNSK007550t:7403..7855 -
Alignment locationNSK007551:7807..8900 -
Alignment locationNSK007551t:7807..8900 -
Alignment locationNSK007552:8071..8875 -
Alignment locationNSK007552t:8071..8875 -
Alignment locationNSK007553:9706..10060 +
Alignment locationNSK007553t:9706..10060 +
Alignment locationNSK007554:9710..11103 -
Alignment locationNSK007554t:9710..11103 -
Alignment locationNSK007555:11853..12463 -
Alignment locationNSK007555t:11853..12463 -
Alignment locationNSK007556:13327..14250 +
Alignment locationNSK007556t:13327..14250 +
Alignment locationNSK007557:14671..15033 +
Alignment locationNSK007557t:14671..15033 +
Alignment locationNSK007558:15068..16013 +
Alignment locationNSK007558t:15068..16013 +
Alignment locationNSK007559:16218..17775 -
Alignment locationNSK007559t:16218..17775 -
Alignment locationNSK007560:16793..18700 +
Alignment locationNSK007560t:16793..18700 +
Alignment locationNSK007561:18591..18927 +
Alignment locationNSK007561t:18591..18927 +
Alignment locationNSK007562:19959..26468 +
Alignment locationNSK007562t:19959..26468 +
Alignment locationNSK007563:27184..28110 +
Alignment locationNSK007563t:27184..28110 +
Alignment locationNSK007564:28718..31684 +
Alignment locationNSK007564t:28718..31684 +
Alignment locationNSK007565:33038..37548 -
Alignment locationNSK007565t:33038..37548 -
Alignment locationNSK007566:37821..38840 -
Alignment locationNSK007566t:37821..38840 -
Alignment locationNSK007567:38647..39334 -
Alignment locationNSK007567t:38647..39334 -
Alignment locationNSK007568:39537..44446 +
Alignment locationNSK007568t:39537..44446 +
Alignment locationNSK007569:44989..47499 -
Alignment locationNSK007569t:44989..47499 -
Alignment locationNSK007570:48526..49875 -
Alignment locationNSK007570t:48526..49875 -
Alignment locationNSK007571:50906..52336 +
Alignment locationNSK007571t:50906..52336 +
Alignment locationNSK007572:53641..56579 +
Alignment locationNSK007572t:53641..56579 +
Alignment locationNSK007573:56798..57658 -
Alignment locationNSK007573t:56798..57658 -
Alignment locationNSK007574:59069..62087 -
Alignment locationNSK007574t:59069..62087 -
Alignment locationNSK007575:62674..63980 -
Alignment locationNSK007575t:62674..63980 -
Alignment locationNSK007576:63236..64033 +
Alignment locationNSK007576t:63236..64033 +
Alignment locationNSK007577:64131..64766 +
Alignment locationNSK007577t:64131..64766 +
Alignment locationNSK007578:66571..68447 +
Alignment locationNSK007578t:66571..68447 +
Alignment locationNSK007579:70931..71312 -
Alignment locationNSK007579t:70931..71312 -
Alignment locationNSK007580:71655..74503 -
Alignment locationNSK007580t:71655..74503 -
Alignment locationNSK007581:76728..77372 +
Alignment locationNSK007581t:76728..77372 +
Alignment locationNSK007582:79430..79727 +
Alignment locationNSK007582t:79430..79727 +
Alignment locationNSK007583:79697..80156 -
Alignment locationNSK007583t:79697..80156 -
Alignment locationNSK007584:81495..84561 +
Alignment locationNSK007584t:81495..84561 +
Alignment locationNSK007585:81515..82042 -
Alignment locationNSK007585t:81515..82042 -
Alignment locationnonsR030:63..63980 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NSK007548geneNSK007548:62..5882 +
NSK007548tmRNANSK007548t:62..5882 +
NSK007549geneNSK007549:6373..7098 -
NSK007549tmRNANSK007549t:6373..7098 -
NSK007550geneNSK007550:7403..7855 -
NSK007550tmRNANSK007550t:7403..7855 -
NSK007551geneNSK007551:7807..8900 -
NSK007551tmRNANSK007551t:7807..8900 -
NSK007552geneNSK007552:8071..8875 -
NSK007552tmRNANSK007552t:8071..8875 -
NSK007553geneNSK007553:9706..10060 +
NSK007553tmRNANSK007553t:9706..10060 +
NSK007554geneNSK007554:9710..11103 -
NSK007554tmRNANSK007554t:9710..11103 -
NSK007555geneNSK007555:11853..12463 -
NSK007555tmRNANSK007555t:11853..12463 -
NSK007556geneNSK007556:13327..14250 +
NSK007556tmRNANSK007556t:13327..14250 +
NSK007557geneNSK007557:14671..15033 +
NSK007557tmRNANSK007557t:14671..15033 +
NSK007558geneNSK007558:15068..16013 +
NSK007558tmRNANSK007558t:15068..16013 +
NSK007559geneNSK007559:16218..17775 -
NSK007559tmRNANSK007559t:16218..17775 -
NSK007560geneNSK007560:16793..18700 +
NSK007560tmRNANSK007560t:16793..18700 +
NSK007561geneNSK007561:18591..18927 +
NSK007561tmRNANSK007561t:18591..18927 +
NSK007562geneNSK007562:19959..26468 +
NSK007562tmRNANSK007562t:19959..26468 +
NSK007563geneNSK007563:27184..28110 +
NSK007563tmRNANSK007563t:27184..28110 +
NSK007564geneNSK007564:28718..31684 +
NSK007564tmRNANSK007564t:28718..31684 +
NSK007565geneNSK007565:33038..37548 -
NSK007565tmRNANSK007565t:33038..37548 -
NSK007566geneNSK007566:37821..38840 -
NSK007566tmRNANSK007566t:37821..38840 -
NSK007567geneNSK007567:38647..39334 -
NSK007567tmRNANSK007567t:38647..39334 -
NSK007568geneNSK007568:39537..44446 +
NSK007568tmRNANSK007568t:39537..44446 +
NSK007569geneNSK007569:44989..47499 -
NSK007569tmRNANSK007569t:44989..47499 -
NSK007570geneNSK007570:48526..49875 -
NSK007570tmRNANSK007570t:48526..49875 -
NSK007571geneNSK007571:50906..52336 +
NSK007571tmRNANSK007571t:50906..52336 +
NSK007572geneNSK007572:53641..56579 +
NSK007572tmRNANSK007572t:53641..56579 +
NSK007573geneNSK007573:56798..57658 -
NSK007573tmRNANSK007573t:56798..57658 -
NSK007574geneNSK007574:59069..62087 -
NSK007574tmRNANSK007574t:59069..62087 -
NSK007575geneNSK007575:62674..63980 -
NSK007575tmRNANSK007575t:62674..63980 -
NSK007576geneNSK007576:63236..64033 +
NSK007576tmRNANSK007576t:63236..64033 +
NSK007577geneNSK007577:64131..64766 +
NSK007577tmRNANSK007577t:64131..64766 +
NSK007578geneNSK007578:66571..68447 +
NSK007578tmRNANSK007578t:66571..68447 +
NSK007579geneNSK007579:70931..71312 -
NSK007579tmRNANSK007579t:70931..71312 -
NSK007580geneNSK007580:71655..74503 -
NSK007580tmRNANSK007580t:71655..74503 -
NSK007581geneNSK007581:76728..77372 +
NSK007581tmRNANSK007581t:76728..77372 +
NSK007582geneNSK007582:79430..79727 +
NSK007582tmRNANSK007582t:79430..79727 +
NSK007583geneNSK007583:79697..80156 -
NSK007583tmRNANSK007583t:79697..80156 -
NSK007584geneNSK007584:81495..84561 +
NSK007584tmRNANSK007584t:81495..84561 +
NSK007585geneNSK007585:81515..82042 -
NSK007585tmRNANSK007585t:81515..82042 -
nonsR030syntenic_regionnonsR030:63..63980 -
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Genome assembly for N. salina CCMP1776 (version 2)2019-10-08
Annotated Terms
Homology
Relationships
Sequences
Synonyms
Publications