scaffold39, scaffold39 (supercontig) Nannochloropsis salina

Overview
Namescaffold39
Unique Namescaffold39
Typesupercontig
OrganismNannochloropsis salina (N. salina CCMP1776)
Sequence length102269
Alignment locationNSK006520:1447..2910 +
Alignment locationNSK006520t:1447..2910 +
Alignment locationNSK006521:3771..6182 +
Alignment locationNSK006521t:3771..6182 +
Alignment locationNSK006522:6589..10554 +
Alignment locationNSK006522t:6589..10554 +
Alignment locationNSK006523:10902..11579 -
Alignment locationNSK006523t:10902..11579 -
Alignment locationNSK006524:11837..13459 +
Alignment locationNSK006524t:11837..13459 +
Alignment locationNSK006525:13875..17113 -
Alignment locationNSK006525t:13875..17113 -
Alignment locationNSK006526:17694..18873 +
Alignment locationNSK006526t:17694..18873 +
Alignment locationNSK006527:20167..21786 +
Alignment locationNSK006527t:20167..21786 +
Alignment locationNSK006528:21029..21315 +
Alignment locationNSK006528t:21029..21315 +
Alignment locationNSK006529:23121..28447 -
Alignment locationNSK006529t:23121..28447 -
Alignment locationNSK006530:26794..27163 +
Alignment locationNSK006530t:26794..27163 +
Alignment locationNSK006531:29840..30755 +
Alignment locationNSK006531t:29840..30755 +
Alignment locationNSK006532:31741..32440 +
Alignment locationNSK006532t:31741..32440 +
Alignment locationNSK006533:32925..34688 -
Alignment locationNSK006533t:32925..34688 -
Alignment locationNSK006534:35691..36257 +
Alignment locationNSK006534t:35691..36257 +
Alignment locationNSK006535:36445..38509 -
Alignment locationNSK006535t:36445..38509 -
Alignment locationNSK006536:39422..40814 -
Alignment locationNSK006536t:39422..40814 -
Alignment locationNSK006537:41925..43740 +
Alignment locationNSK006537t:41925..43740 +
Alignment locationNSK006538:43767..44105 +
Alignment locationNSK006538t:43767..44105 +
Alignment locationNSK006539:44433..44908 -
Alignment locationNSK006539t:44433..44908 -
Alignment locationNSK006540:45398..45804 -
Alignment locationNSK006540t:45398..45804 -
Alignment locationNSK006541:45871..47156 -
Alignment locationNSK006541t:45871..47156 -
Alignment locationNSK006542:45902..46881 +
Alignment locationNSK006542t:45902..46881 +
Alignment locationNSK006543:47503..49840 -
Alignment locationNSK006543t:47503..49840 -
Alignment locationNSK006544:51039..52033 +
Alignment locationNSK006544t:51039..52033 +
Alignment locationNSK006545:51601..52167 -
Alignment locationNSK006545t:51601..52167 -
Alignment locationNSK006546:52453..52661 -
Alignment locationNSK006546t:52453..52661 -
Alignment locationNSK006547:52781..53228 +
Alignment locationNSK006547t:52781..53228 +
Alignment locationNSK006548:53216..53578 +
Alignment locationNSK006548t:53216..53578 +
Alignment locationNSK006549:53548..53970 -
Alignment locationNSK006549t:53548..53970 -
Alignment locationNSK006550:54333..54552 +
Alignment locationNSK006550t:54333..54552 +
Alignment locationNSK006551:55342..60890 +
Alignment locationNSK006551t:55342..60890 +
Alignment locationNSK006552:60929..61432 +
Alignment locationNSK006552t:60929..61432 +
Alignment locationNSK006553:61590..66963 +
Alignment locationNSK006553t:61590..66963 +
Alignment locationNSK006554:67363..67815 -
Alignment locationNSK006554t:67363..67815 -
Alignment locationNSK006555:68422..70261 +
Alignment locationNSK006555t:68422..70261 +
Alignment locationNSK006556:71115..73254 -
Alignment locationNSK006556t:71115..73254 -
Alignment locationNSK006557:74826..78556 -
Alignment locationNSK006557t:74826..78556 -
Alignment locationNSK006558:81925..82324 -
Alignment locationNSK006558t:81925..82324 -
Alignment locationNSK006559:82710..84226 +
Alignment locationNSK006559t:82710..84226 +
Alignment locationNSK006560:85540..88412 -
Alignment locationNSK006560t:85540..88412 -
Alignment locationNSK006561:88977..90756 -
Alignment locationNSK006561t:88977..90756 -
Alignment locationNSK006562:91035..93094 +
Alignment locationNSK006562t:91035..93094 +
Alignment locationNSK006563:93575..94016 -
Alignment locationNSK006563t:93575..94016 -
Alignment locationNSK006564:94065..94567 -
Alignment locationNSK006564t:94065..94567 -
Alignment locationNSK006565:94418..97504 -
Alignment locationNSK006565t:94418..97504 -
Alignment locationNSK006566:98043..100667 -
Alignment locationNSK006566t:98043..100667 -
Alignment locationNSK006567:100350..100978 -
Alignment locationNSK006567t:100350..100978 -
Alignment locationnonsR105:3772..100667 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NSK006520geneNSK006520:1447..2910 +
NSK006520tmRNANSK006520t:1447..2910 +
NSK006521geneNSK006521:3771..6182 +
NSK006521tmRNANSK006521t:3771..6182 +
NSK006522geneNSK006522:6589..10554 +
NSK006522tmRNANSK006522t:6589..10554 +
NSK006523geneNSK006523:10902..11579 -
NSK006523tmRNANSK006523t:10902..11579 -
NSK006524geneNSK006524:11837..13459 +
NSK006524tmRNANSK006524t:11837..13459 +
NSK006525geneNSK006525:13875..17113 -
NSK006525tmRNANSK006525t:13875..17113 -
NSK006526geneNSK006526:17694..18873 +
NSK006526tmRNANSK006526t:17694..18873 +
NSK006527geneNSK006527:20167..21786 +
NSK006527tmRNANSK006527t:20167..21786 +
NSK006528geneNSK006528:21029..21315 +
NSK006528tmRNANSK006528t:21029..21315 +
NSK006529geneNSK006529:23121..28447 -
NSK006529tmRNANSK006529t:23121..28447 -
NSK006530geneNSK006530:26794..27163 +
NSK006530tmRNANSK006530t:26794..27163 +
NSK006531geneNSK006531:29840..30755 +
NSK006531tmRNANSK006531t:29840..30755 +
NSK006532geneNSK006532:31741..32440 +
NSK006532tmRNANSK006532t:31741..32440 +
NSK006533geneNSK006533:32925..34688 -
NSK006533tmRNANSK006533t:32925..34688 -
NSK006534geneNSK006534:35691..36257 +
NSK006534tmRNANSK006534t:35691..36257 +
NSK006535geneNSK006535:36445..38509 -
NSK006535tmRNANSK006535t:36445..38509 -
NSK006536geneNSK006536:39422..40814 -
NSK006536tmRNANSK006536t:39422..40814 -
NSK006537geneNSK006537:41925..43740 +
NSK006537tmRNANSK006537t:41925..43740 +
NSK006538geneNSK006538:43767..44105 +
NSK006538tmRNANSK006538t:43767..44105 +
NSK006539geneNSK006539:44433..44908 -
NSK006539tmRNANSK006539t:44433..44908 -
NSK006540geneNSK006540:45398..45804 -
NSK006540tmRNANSK006540t:45398..45804 -
NSK006541geneNSK006541:45871..47156 -
NSK006541tmRNANSK006541t:45871..47156 -
NSK006542geneNSK006542:45902..46881 +
NSK006542tmRNANSK006542t:45902..46881 +
NSK006543geneNSK006543:47503..49840 -
NSK006543tmRNANSK006543t:47503..49840 -
NSK006544geneNSK006544:51039..52033 +
NSK006544tmRNANSK006544t:51039..52033 +
NSK006545geneNSK006545:51601..52167 -
NSK006545tmRNANSK006545t:51601..52167 -
NSK006546geneNSK006546:52453..52661 -
NSK006546tmRNANSK006546t:52453..52661 -
NSK006547geneNSK006547:52781..53228 +
NSK006547tmRNANSK006547t:52781..53228 +
NSK006548geneNSK006548:53216..53578 +
NSK006548tmRNANSK006548t:53216..53578 +
NSK006549geneNSK006549:53548..53970 -
NSK006549tmRNANSK006549t:53548..53970 -
NSK006550geneNSK006550:54333..54552 +
NSK006550tmRNANSK006550t:54333..54552 +
NSK006551geneNSK006551:55342..60890 +
NSK006551tmRNANSK006551t:55342..60890 +
NSK006552geneNSK006552:60929..61432 +
NSK006552tmRNANSK006552t:60929..61432 +
NSK006553geneNSK006553:61590..66963 +
NSK006553tmRNANSK006553t:61590..66963 +
NSK006554geneNSK006554:67363..67815 -
NSK006554tmRNANSK006554t:67363..67815 -
NSK006555geneNSK006555:68422..70261 +
NSK006555tmRNANSK006555t:68422..70261 +
NSK006556geneNSK006556:71115..73254 -
NSK006556tmRNANSK006556t:71115..73254 -
NSK006557geneNSK006557:74826..78556 -
NSK006557tmRNANSK006557t:74826..78556 -
NSK006558geneNSK006558:81925..82324 -
NSK006558tmRNANSK006558t:81925..82324 -
NSK006559geneNSK006559:82710..84226 +
NSK006559tmRNANSK006559t:82710..84226 +
NSK006560geneNSK006560:85540..88412 -
NSK006560tmRNANSK006560t:85540..88412 -
NSK006561geneNSK006561:88977..90756 -
NSK006561tmRNANSK006561t:88977..90756 -
NSK006562geneNSK006562:91035..93094 +
NSK006562tmRNANSK006562t:91035..93094 +
NSK006563geneNSK006563:93575..94016 -
NSK006563tmRNANSK006563t:93575..94016 -
NSK006564geneNSK006564:94065..94567 -
NSK006564tmRNANSK006564t:94065..94567 -
NSK006565geneNSK006565:94418..97504 -
NSK006565tmRNANSK006565t:94418..97504 -
NSK006566geneNSK006566:98043..100667 -
NSK006566tmRNANSK006566t:98043..100667 -
NSK006567geneNSK006567:100350..100978 -
NSK006567tmRNANSK006567t:100350..100978 -
nonsR105syntenic_regionnonsR105:3772..100667 -
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Genome assembly for N. salina CCMP1776 (version 2)2019-10-08
Annotated Terms
Homology
Relationships
Sequences
Synonyms
Publications