scaffold36, scaffold36 (supercontig) Nannochloropsis salina

Overview
Namescaffold36
Unique Namescaffold36
Typesupercontig
OrganismNannochloropsis salina (N. salina CCMP1776)
Sequence length115399
Alignment locationNSK006384:246..885 -
Alignment locationNSK006384t:246..885 -
Alignment locationNSK006385:1851..5168 +
Alignment locationNSK006385t:1851..5168 +
Alignment locationNSK006386:5071..5337 +
Alignment locationNSK006386t:5071..5337 +
Alignment locationNSK006387:5328..5598 -
Alignment locationNSK006387t:5328..5598 -
Alignment locationNSK006388:5550..5982 +
Alignment locationNSK006388t:5550..5982 +
Alignment locationNSK006389:5966..6210 -
Alignment locationNSK006389t:5966..6210 -
Alignment locationNSK006390:6245..7616 -
Alignment locationNSK006390t:6245..7616 -
Alignment locationNSK006391:9793..11169 -
Alignment locationNSK006391t:9793..11169 -
Alignment locationNSK006392:11934..12478 +
Alignment locationNSK006392t:11934..12478 +
Alignment locationNSK006393:12602..14801 +
Alignment locationNSK006393t:12602..14801 +
Alignment locationNSK006394:16703..17040 +
Alignment locationNSK006394t:16703..17040 +
Alignment locationNSK006395:17328..20304 -
Alignment locationNSK006395t:17328..20304 -
Alignment locationNSK006396:21398..24158 -
Alignment locationNSK006396t:21398..24158 -
Alignment locationNSK006397:22781..23085 -
Alignment locationNSK006397t:22781..23085 -
Alignment locationNSK006398:24895..25429 -
Alignment locationNSK006398t:24895..25429 -
Alignment locationNSK006399:25664..28553 +
Alignment locationNSK006399t:25664..28553 +
Alignment locationNSK006400:29927..31514 -
Alignment locationNSK006400t:29927..31514 -
Alignment locationNSK006401:32625..34231 -
Alignment locationNSK006401t:32625..34231 -
Alignment locationNSK006402:35371..41196 +
Alignment locationNSK006402t:35371..41196 +
Alignment locationNSK006403:42083..43293 +
Alignment locationNSK006403t:42083..43293 +
Alignment locationNSK006404:43481..44119 +
Alignment locationNSK006404t:43481..44119 +
Alignment locationNSK006405:44272..44826 -
Alignment locationNSK006405t:44272..44826 -
Alignment locationNSK006406:44860..45196 +
Alignment locationNSK006406t:44860..45196 +
Alignment locationNSK006407:45340..45599 +
Alignment locationNSK006407t:45340..45599 +
Alignment locationNSK006408:46526..47604 +
Alignment locationNSK006408t:46526..47604 +
Alignment locationNSK006409:49615..52823 +
Alignment locationNSK006409t:49615..52823 +
Alignment locationNSK006410:54081..56862 +
Alignment locationNSK006410t:54081..56862 +
Alignment locationNSK006411:56908..57254 -
Alignment locationNSK006411t:56908..57254 -
Alignment locationNSK006412:58168..60679 -
Alignment locationNSK006412t:58168..60679 -
Alignment locationNSK006413:63758..64639 +
Alignment locationNSK006413t:63758..64639 +
Alignment locationNSK006414:64935..65872 -
Alignment locationNSK006414t:64935..65872 -
Alignment locationNSK006415:65968..69435 +
Alignment locationNSK006415t:65968..69435 +
Alignment locationNSK006416:69497..69853 -
Alignment locationNSK006416t:69497..69853 -
Alignment locationNSK006417:69830..70067 -
Alignment locationNSK006417t:69830..70067 -
Alignment locationNSK006418:70521..77973 -
Alignment locationNSK006418t:70521..77973 -
Alignment locationNSK006419:78936..79867 -
Alignment locationNSK006419t:78936..79867 -
Alignment locationNSK006420:80566..82544 -
Alignment locationNSK006420t:80566..82544 -
Alignment locationNSK006421:82956..84217 +
Alignment locationNSK006421t:82956..84217 +
Alignment locationNSK006422:86372..88071 +
Alignment locationNSK006422t:86372..88071 +
Alignment locationNSK006423:88525..88864 -
Alignment locationNSK006423t:88525..88864 -
Alignment locationNSK006424:89243..91284 +
Alignment locationNSK006424t:89243..91284 +
Alignment locationNSK006425:91777..92826 -
Alignment locationNSK006425t:91777..92826 -
Alignment locationNSK006426:93310..107946 -
Alignment locationNSK006426t:93310..107946 -
Alignment locationNSK006427:108578..111376 +
Alignment locationNSK006427t:108578..111376 +
Alignment locationNSK006428:112523..113008 +
Alignment locationNSK006428t:112523..113008 +
Alignment locationnonsR047:247..111376 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NSK006384geneNSK006384:246..885 -
NSK006384tmRNANSK006384t:246..885 -
NSK006385geneNSK006385:1851..5168 +
NSK006385tmRNANSK006385t:1851..5168 +
NSK006386geneNSK006386:5071..5337 +
NSK006386tmRNANSK006386t:5071..5337 +
NSK006387geneNSK006387:5328..5598 -
NSK006387tmRNANSK006387t:5328..5598 -
NSK006388geneNSK006388:5550..5982 +
NSK006388tmRNANSK006388t:5550..5982 +
NSK006389geneNSK006389:5966..6210 -
NSK006389tmRNANSK006389t:5966..6210 -
NSK006390geneNSK006390:6245..7616 -
NSK006390tmRNANSK006390t:6245..7616 -
NSK006391geneNSK006391:9793..11169 -
NSK006391tmRNANSK006391t:9793..11169 -
NSK006392geneNSK006392:11934..12478 +
NSK006392tmRNANSK006392t:11934..12478 +
NSK006393geneNSK006393:12602..14801 +
NSK006393tmRNANSK006393t:12602..14801 +
NSK006394geneNSK006394:16703..17040 +
NSK006394tmRNANSK006394t:16703..17040 +
NSK006395geneNSK006395:17328..20304 -
NSK006395tmRNANSK006395t:17328..20304 -
NSK006396geneNSK006396:21398..24158 -
NSK006396tmRNANSK006396t:21398..24158 -
NSK006397geneNSK006397:22781..23085 -
NSK006397tmRNANSK006397t:22781..23085 -
NSK006398geneNSK006398:24895..25429 -
NSK006398tmRNANSK006398t:24895..25429 -
NSK006399geneNSK006399:25664..28553 +
NSK006399tmRNANSK006399t:25664..28553 +
NSK006400geneNSK006400:29927..31514 -
NSK006400tmRNANSK006400t:29927..31514 -
NSK006401geneNSK006401:32625..34231 -
NSK006401tmRNANSK006401t:32625..34231 -
NSK006402geneNSK006402:35371..41196 +
NSK006402tmRNANSK006402t:35371..41196 +
NSK006403geneNSK006403:42083..43293 +
NSK006403tmRNANSK006403t:42083..43293 +
NSK006404geneNSK006404:43481..44119 +
NSK006404tmRNANSK006404t:43481..44119 +
NSK006405geneNSK006405:44272..44826 -
NSK006405tmRNANSK006405t:44272..44826 -
NSK006406geneNSK006406:44860..45196 +
NSK006406tmRNANSK006406t:44860..45196 +
NSK006407geneNSK006407:45340..45599 +
NSK006407tmRNANSK006407t:45340..45599 +
NSK006408geneNSK006408:46526..47604 +
NSK006408tmRNANSK006408t:46526..47604 +
NSK006409geneNSK006409:49615..52823 +
NSK006409tmRNANSK006409t:49615..52823 +
NSK006410geneNSK006410:54081..56862 +
NSK006410tmRNANSK006410t:54081..56862 +
NSK006411geneNSK006411:56908..57254 -
NSK006411tmRNANSK006411t:56908..57254 -
NSK006412geneNSK006412:58168..60679 -
NSK006412tmRNANSK006412t:58168..60679 -
NSK006413geneNSK006413:63758..64639 +
NSK006413tmRNANSK006413t:63758..64639 +
NSK006414geneNSK006414:64935..65872 -
NSK006414tmRNANSK006414t:64935..65872 -
NSK006415geneNSK006415:65968..69435 +
NSK006415tmRNANSK006415t:65968..69435 +
NSK006416geneNSK006416:69497..69853 -
NSK006416tmRNANSK006416t:69497..69853 -
NSK006417geneNSK006417:69830..70067 -
NSK006417tmRNANSK006417t:69830..70067 -
NSK006418geneNSK006418:70521..77973 -
NSK006418tmRNANSK006418t:70521..77973 -
NSK006419geneNSK006419:78936..79867 -
NSK006419tmRNANSK006419t:78936..79867 -
NSK006420geneNSK006420:80566..82544 -
NSK006420tmRNANSK006420t:80566..82544 -
NSK006421geneNSK006421:82956..84217 +
NSK006421tmRNANSK006421t:82956..84217 +
NSK006422geneNSK006422:86372..88071 +
NSK006422tmRNANSK006422t:86372..88071 +
NSK006423geneNSK006423:88525..88864 -
NSK006423tmRNANSK006423t:88525..88864 -
NSK006424geneNSK006424:89243..91284 +
NSK006424tmRNANSK006424t:89243..91284 +
NSK006425geneNSK006425:91777..92826 -
NSK006425tmRNANSK006425t:91777..92826 -
NSK006426geneNSK006426:93310..107946 -
NSK006426tmRNANSK006426t:93310..107946 -
NSK006427geneNSK006427:108578..111376 +
NSK006427tmRNANSK006427t:108578..111376 +
NSK006428geneNSK006428:112523..113008 +
NSK006428tmRNANSK006428t:112523..113008 +
nonsR047syntenic_regionnonsR047:247..111376 +
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Genome assembly for N. salina CCMP1776 (version 2)2019-10-08
Annotated Terms
Homology
Relationships
Sequences
Synonyms
Publications