scaffold35, scaffold35 (supercontig) Nannochloropsis salina

Overview
Namescaffold35
Unique Namescaffold35
Typesupercontig
OrganismNannochloropsis salina (N. salina CCMP1776)
Sequence length135951
Alignment locationNSK006310:215..1108 +
Alignment locationNSK006310t:215..1108 +
Alignment locationNSK006311:1547..2646 -
Alignment locationNSK006311t:1547..2646 -
Alignment locationNSK006312:4101..7273 -
Alignment locationNSK006312t:4101..7273 -
Alignment locationNSK006313:8569..9214 -
Alignment locationNSK006313t:8569..9214 -
Alignment locationNSK006314:9692..11261 +
Alignment locationNSK006314t:9692..11261 +
Alignment locationNSK006315:11566..12499 -
Alignment locationNSK006315t:11566..12499 -
Alignment locationNSK006316:12895..13380 +
Alignment locationNSK006316t:12895..13380 +
Alignment locationNSK006317:13493..14992 -
Alignment locationNSK006317t:13493..14992 -
Alignment locationNSK006318:15354..15580 -
Alignment locationNSK006318t:15354..15580 -
Alignment locationNSK006319:16245..18611 -
Alignment locationNSK006319t:16245..18611 -
Alignment locationNSK006320:19940..23734 +
Alignment locationNSK006320t:19940..23734 +
Alignment locationNSK006321:24772..26214 -
Alignment locationNSK006321t:24772..26214 -
Alignment locationNSK006322:27054..27307 +
Alignment locationNSK006322t:27054..27307 +
Alignment locationNSK006323:27593..28571 -
Alignment locationNSK006323t:27593..28571 -
Alignment locationNSK006324:28909..31219 +
Alignment locationNSK006324t:28909..31219 +
Alignment locationNSK006325:31425..33101 -
Alignment locationNSK006325t:31425..33101 -
Alignment locationNSK006326:33391..33996 -
Alignment locationNSK006326t:33391..33996 -
Alignment locationNSK006327:34020..35757 +
Alignment locationNSK006327t:34020..35757 +
Alignment locationNSK006328:35887..38801 +
Alignment locationNSK006328t:35887..38801 +
Alignment locationNSK006329:39127..39636 +
Alignment locationNSK006329t:39127..39636 +
Alignment locationNSK006330:39333..40953 -
Alignment locationNSK006330t:39333..40953 -
Alignment locationNSK006331:41609..46556 -
Alignment locationNSK006331t:41609..46556 -
Alignment locationNSK006332:47164..48472 +
Alignment locationNSK006332t:47164..48472 +
Alignment locationNSK006333:49437..51002 +
Alignment locationNSK006333t:49437..51002 +
Alignment locationNSK006334:51367..53262 -
Alignment locationNSK006334t:51367..53262 -
Alignment locationNSK006335:52591..53228 +
Alignment locationNSK006335t:52591..53228 +
Alignment locationNSK006336:55627..57748 +
Alignment locationNSK006336t:55627..57748 +
Alignment locationNSK006337:58216..60614 -
Alignment locationNSK006337t:58216..60614 -
Alignment locationNSK006338:58343..59012 -
Alignment locationNSK006338t:58343..59012 -
Alignment locationNSK006339:59155..59473 -
Alignment locationNSK006339t:59155..59473 -
Alignment locationNSK006340:61454..63088 +
Alignment locationNSK006340t:61454..63088 +
Alignment locationNSK006341:63958..65261 -
Alignment locationNSK006341t:63958..65261 -
Alignment locationNSK006342:63959..65458 -
Alignment locationNSK006342t:63959..65458 -
Alignment locationNSK006343:65868..77660 +
Alignment locationNSK006343t:65868..77660 +
Alignment locationNSK006344:77695..83889 +
Alignment locationNSK006344t:77695..83889 +
Alignment locationNSK006345:85228..87096 +
Alignment locationNSK006345t:85228..87096 +
Alignment locationNSK006346:87476..87988 -
Alignment locationNSK006346t:87476..87988 -
Alignment locationNSK006347:89046..91227 +
Alignment locationNSK006347t:89046..91227 +
Alignment locationNSK006348:90458..90924 +
Alignment locationNSK006348t:90458..90924 +
Alignment locationNSK006349:91445..92977 +
Alignment locationNSK006349t:91445..92977 +
Alignment locationNSK006350:93416..96114 +
Alignment locationNSK006350t:93416..96114 +
Alignment locationNSK006351:95328..95687 -
Alignment locationNSK006351t:95328..95687 -
Alignment locationNSK006352:96272..97060 +
Alignment locationNSK006352t:96272..97060 +
Alignment locationNSK006353:96583..97044 +
Alignment locationNSK006353t:96583..97044 +
Alignment locationNSK006354:97444..97659 +
Alignment locationNSK006354t:97444..97659 +
Alignment locationNSK006355:97641..100815 +
Alignment locationNSK006355t:97641..100815 +
Alignment locationNSK006356:97672..98203 +
Alignment locationNSK006356t:97672..98203 +
Alignment locationNSK006357:98464..98731 -
Alignment locationNSK006357t:98464..98731 -
Alignment locationNSK006358:101432..104259 -
Alignment locationNSK006358t:101432..104259 -
Alignment locationNSK006359:102671..103099 -
Alignment locationNSK006359t:102671..103099 -
Alignment locationNSK006360:105238..105552 +
Alignment locationNSK006360t:105238..105552 +
Alignment locationNSK006361:105572..107621 -
Alignment locationNSK006361t:105572..107621 -
Alignment locationNSK006362:108697..108898 +
Alignment locationNSK006362t:108697..108898 +
Alignment locationNSK006363:109950..111823 +
Alignment locationNSK006363t:109950..111823 +
Alignment locationNSK006364:111935..113927 +
Alignment locationNSK006364t:111935..113927 +
Alignment locationNSK006365:114397..115317 -
Alignment locationNSK006365t:114397..115317 -
Alignment locationNSK006366:115765..115986 -
Alignment locationNSK006366t:115765..115986 -
Alignment locationNSK006367:116194..118199 +
Alignment locationNSK006367t:116194..118199 +
Alignment locationNSK006368:118828..119467 +
Alignment locationNSK006368t:118828..119467 +
Alignment locationNSK006369:119841..120222 -
Alignment locationNSK006369t:119841..120222 -
Alignment locationNSK006370:120212..120781 +
Alignment locationNSK006370t:120212..120781 +
Alignment locationNSK006371:120717..123889 -
Alignment locationNSK006371t:120717..123889 -
Alignment locationNSK006372:123690..124028 -
Alignment locationNSK006372t:123690..124028 -
Alignment locationNSK006373:124301..124849 -
Alignment locationNSK006373t:124301..124849 -
Alignment locationNSK006374:125221..125960 -
Alignment locationNSK006374t:125221..125960 -
Alignment locationNSK006375:125663..125962 +
Alignment locationNSK006375t:125663..125962 +
Alignment locationNSK006376:125913..126125 -
Alignment locationNSK006376t:125913..126125 -
Alignment locationNSK006377:126180..126551 +
Alignment locationNSK006377t:126180..126551 +
Alignment locationNSK006378:127033..127821 +
Alignment locationNSK006378t:127033..127821 +
Alignment locationNSK006379:128124..128789 -
Alignment locationNSK006379t:128124..128789 -
Alignment locationNSK006380:130359..130801 +
Alignment locationNSK006380t:130359..130801 +
Alignment locationNSK006381:130807..131003 +
Alignment locationNSK006381t:130807..131003 +
Alignment locationNSK006382:131734..133325 +
Alignment locationNSK006382t:131734..133325 +
Alignment locationNSK006383:134040..135627 +
Alignment locationNSK006383t:134040..135627 +
Alignment locationnonsR034:216..135627 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NSK006310geneNSK006310:215..1108 +
NSK006310tmRNANSK006310t:215..1108 +
NSK006311geneNSK006311:1547..2646 -
NSK006311tmRNANSK006311t:1547..2646 -
NSK006312geneNSK006312:4101..7273 -
NSK006312tmRNANSK006312t:4101..7273 -
NSK006313geneNSK006313:8569..9214 -
NSK006313tmRNANSK006313t:8569..9214 -
NSK006314geneNSK006314:9692..11261 +
NSK006314tmRNANSK006314t:9692..11261 +
NSK006315geneNSK006315:11566..12499 -
NSK006315tmRNANSK006315t:11566..12499 -
NSK006316geneNSK006316:12895..13380 +
NSK006316tmRNANSK006316t:12895..13380 +
NSK006317geneNSK006317:13493..14992 -
NSK006317tmRNANSK006317t:13493..14992 -
NSK006318geneNSK006318:15354..15580 -
NSK006318tmRNANSK006318t:15354..15580 -
NSK006319geneNSK006319:16245..18611 -
NSK006319tmRNANSK006319t:16245..18611 -
NSK006320geneNSK006320:19940..23734 +
NSK006320tmRNANSK006320t:19940..23734 +
NSK006321geneNSK006321:24772..26214 -
NSK006321tmRNANSK006321t:24772..26214 -
NSK006322geneNSK006322:27054..27307 +
NSK006322tmRNANSK006322t:27054..27307 +
NSK006323geneNSK006323:27593..28571 -
NSK006323tmRNANSK006323t:27593..28571 -
NSK006324geneNSK006324:28909..31219 +
NSK006324tmRNANSK006324t:28909..31219 +
NSK006325geneNSK006325:31425..33101 -
NSK006325tmRNANSK006325t:31425..33101 -
NSK006326geneNSK006326:33391..33996 -
NSK006326tmRNANSK006326t:33391..33996 -
NSK006327geneNSK006327:34020..35757 +
NSK006327tmRNANSK006327t:34020..35757 +
NSK006328geneNSK006328:35887..38801 +
NSK006328tmRNANSK006328t:35887..38801 +
NSK006329geneNSK006329:39127..39636 +
NSK006329tmRNANSK006329t:39127..39636 +
NSK006330geneNSK006330:39333..40953 -
NSK006330tmRNANSK006330t:39333..40953 -
NSK006331geneNSK006331:41609..46556 -
NSK006331tmRNANSK006331t:41609..46556 -
NSK006332geneNSK006332:47164..48472 +
NSK006332tmRNANSK006332t:47164..48472 +
NSK006333geneNSK006333:49437..51002 +
NSK006333tmRNANSK006333t:49437..51002 +
NSK006334geneNSK006334:51367..53262 -
NSK006334tmRNANSK006334t:51367..53262 -
NSK006335geneNSK006335:52591..53228 +
NSK006335tmRNANSK006335t:52591..53228 +
NSK006336geneNSK006336:55627..57748 +
NSK006336tmRNANSK006336t:55627..57748 +
NSK006337geneNSK006337:58216..60614 -
NSK006337tmRNANSK006337t:58216..60614 -
NSK006338geneNSK006338:58343..59012 -
NSK006338tmRNANSK006338t:58343..59012 -
NSK006339geneNSK006339:59155..59473 -
NSK006339tmRNANSK006339t:59155..59473 -
NSK006340geneNSK006340:61454..63088 +
NSK006340tmRNANSK006340t:61454..63088 +
NSK006341geneNSK006341:63958..65261 -
NSK006341tmRNANSK006341t:63958..65261 -
NSK006342geneNSK006342:63959..65458 -
NSK006342tmRNANSK006342t:63959..65458 -
NSK006343geneNSK006343:65868..77660 +
NSK006343tmRNANSK006343t:65868..77660 +
NSK006344geneNSK006344:77695..83889 +
NSK006344tmRNANSK006344t:77695..83889 +
NSK006345geneNSK006345:85228..87096 +
NSK006345tmRNANSK006345t:85228..87096 +
NSK006346geneNSK006346:87476..87988 -
NSK006346tmRNANSK006346t:87476..87988 -
NSK006347geneNSK006347:89046..91227 +
NSK006347tmRNANSK006347t:89046..91227 +
NSK006348geneNSK006348:90458..90924 +
NSK006348tmRNANSK006348t:90458..90924 +
NSK006349geneNSK006349:91445..92977 +
NSK006349tmRNANSK006349t:91445..92977 +
NSK006350geneNSK006350:93416..96114 +
NSK006350tmRNANSK006350t:93416..96114 +
NSK006351geneNSK006351:95328..95687 -
NSK006351tmRNANSK006351t:95328..95687 -
NSK006352geneNSK006352:96272..97060 +
NSK006352tmRNANSK006352t:96272..97060 +
NSK006353geneNSK006353:96583..97044 +
NSK006353tmRNANSK006353t:96583..97044 +
NSK006354geneNSK006354:97444..97659 +
NSK006354tmRNANSK006354t:97444..97659 +
NSK006355geneNSK006355:97641..100815 +
NSK006355tmRNANSK006355t:97641..100815 +
NSK006356geneNSK006356:97672..98203 +
NSK006356tmRNANSK006356t:97672..98203 +
NSK006357geneNSK006357:98464..98731 -
NSK006357tmRNANSK006357t:98464..98731 -
NSK006358geneNSK006358:101432..104259 -
NSK006358tmRNANSK006358t:101432..104259 -
NSK006359geneNSK006359:102671..103099 -
NSK006359tmRNANSK006359t:102671..103099 -
NSK006360geneNSK006360:105238..105552 +
NSK006360tmRNANSK006360t:105238..105552 +
NSK006361geneNSK006361:105572..107621 -
NSK006361tmRNANSK006361t:105572..107621 -
NSK006362geneNSK006362:108697..108898 +
NSK006362tmRNANSK006362t:108697..108898 +
NSK006363geneNSK006363:109950..111823 +
NSK006363tmRNANSK006363t:109950..111823 +
NSK006364geneNSK006364:111935..113927 +
NSK006364tmRNANSK006364t:111935..113927 +
NSK006365geneNSK006365:114397..115317 -
NSK006365tmRNANSK006365t:114397..115317 -
NSK006366geneNSK006366:115765..115986 -
NSK006366tmRNANSK006366t:115765..115986 -
NSK006367geneNSK006367:116194..118199 +
NSK006367tmRNANSK006367t:116194..118199 +
NSK006368geneNSK006368:118828..119467 +
NSK006368tmRNANSK006368t:118828..119467 +
NSK006369geneNSK006369:119841..120222 -
NSK006369tmRNANSK006369t:119841..120222 -
NSK006370geneNSK006370:120212..120781 +
NSK006370tmRNANSK006370t:120212..120781 +
NSK006371geneNSK006371:120717..123889 -
NSK006371tmRNANSK006371t:120717..123889 -
NSK006372geneNSK006372:123690..124028 -
NSK006372tmRNANSK006372t:123690..124028 -
NSK006373geneNSK006373:124301..124849 -
NSK006373tmRNANSK006373t:124301..124849 -
NSK006374geneNSK006374:125221..125960 -
NSK006374tmRNANSK006374t:125221..125960 -
NSK006375geneNSK006375:125663..125962 +
NSK006375tmRNANSK006375t:125663..125962 +
NSK006376geneNSK006376:125913..126125 -
NSK006376tmRNANSK006376t:125913..126125 -
NSK006377geneNSK006377:126180..126551 +
NSK006377tmRNANSK006377t:126180..126551 +
NSK006378geneNSK006378:127033..127821 +
NSK006378tmRNANSK006378t:127033..127821 +
NSK006379geneNSK006379:128124..128789 -
NSK006379tmRNANSK006379t:128124..128789 -
NSK006380geneNSK006380:130359..130801 +
NSK006380tmRNANSK006380t:130359..130801 +
NSK006381geneNSK006381:130807..131003 +
NSK006381tmRNANSK006381t:130807..131003 +
NSK006382geneNSK006382:131734..133325 +
NSK006382tmRNANSK006382t:131734..133325 +
NSK006383geneNSK006383:134040..135627 +
NSK006383tmRNANSK006383t:134040..135627 +
nonsR034syntenic_regionnonsR034:216..135627 +
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Genome assembly for N. salina CCMP1776 (version 2)2019-10-08
Annotated Terms
Homology
Relationships
Sequences
Synonyms
Publications