scaffold33, scaffold33 (supercontig) Nannochloropsis salina

Overview
Namescaffold33
Unique Namescaffold33
Typesupercontig
OrganismNannochloropsis salina (N. salina CCMP1776)
Sequence length145781
Alignment locationNSK006181:72..1402 -
Alignment locationNSK006181t:72..1402 -
Alignment locationNSK006182:733..935 +
Alignment locationNSK006182t:733..935 +
Alignment locationNSK006183:2025..2539 +
Alignment locationNSK006183t:2025..2539 +
Alignment locationNSK006184:2471..4079 -
Alignment locationNSK006184t:2471..4079 -
Alignment locationNSK006185:4618..6750 -
Alignment locationNSK006185t:4618..6750 -
Alignment locationNSK006186:7312..10290 +
Alignment locationNSK006186t:7312..10290 +
Alignment locationNSK006187:10692..13502 -
Alignment locationNSK006187t:10692..13502 -
Alignment locationNSK006188:14642..17726 -
Alignment locationNSK006188t:14642..17726 -
Alignment locationNSK006189:14681..17393 +
Alignment locationNSK006189t:14681..17393 +
Alignment locationNSK006190:18141..19543 -
Alignment locationNSK006190t:18141..19543 -
Alignment locationNSK006191:20402..21627 +
Alignment locationNSK006191t:20402..21627 +
Alignment locationNSK006192:21513..22133 -
Alignment locationNSK006192t:21513..22133 -
Alignment locationNSK006193:23006..25310 -
Alignment locationNSK006193t:23006..25310 -
Alignment locationNSK006194:26064..26480 -
Alignment locationNSK006194t:26064..26480 -
Alignment locationNSK006195:26848..27854 -
Alignment locationNSK006195t:26848..27854 -
Alignment locationNSK006196:30576..36129 +
Alignment locationNSK006196t:30576..36129 +
Alignment locationNSK006197:36799..38209 -
Alignment locationNSK006197t:36799..38209 -
Alignment locationNSK006198:37974..42810 +
Alignment locationNSK006198t:37974..42810 +
Alignment locationNSK006199:43040..44943 -
Alignment locationNSK006199t:43040..44943 -
Alignment locationNSK006200:51951..53789 -
Alignment locationNSK006200t:51951..53789 -
Alignment locationNSK006201:54679..57177 -
Alignment locationNSK006201t:54679..57177 -
Alignment locationNSK006202:57593..58043 +
Alignment locationNSK006202t:57593..58043 +
Alignment locationNSK006203:58185..59816 -
Alignment locationNSK006203t:58185..59816 -
Alignment locationNSK006204:60183..68995 +
Alignment locationNSK006204t:60183..68995 +
Alignment locationNSK006205:65323..65888 -
Alignment locationNSK006205t:65323..65888 -
Alignment locationNSK006206:69329..71291 -
Alignment locationNSK006206t:69329..71291 -
Alignment locationNSK006207:71628..73270 +
Alignment locationNSK006207t:71628..73270 +
Alignment locationNSK006208:73525..75664 -
Alignment locationNSK006208t:73525..75664 -
Alignment locationNSK006209:76060..77420 -
Alignment locationNSK006209t:76060..77420 -
Alignment locationNSK006210:76475..77092 -
Alignment locationNSK006210t:76475..77092 -
Alignment locationNSK006211:77514..77735 +
Alignment locationNSK006211t:77514..77735 +
Alignment locationNSK006212:78745..79341 -
Alignment locationNSK006212t:78745..79341 -
Alignment locationNSK006213:79949..81671 -
Alignment locationNSK006213t:79949..81671 -
Alignment locationNSK006214:81879..84875 -
Alignment locationNSK006214t:81879..84875 -
Alignment locationNSK006215:87114..92975 +
Alignment locationNSK006215t:87114..92975 +
Alignment locationNSK006216:94906..96427 -
Alignment locationNSK006216t:94906..96427 -
Alignment locationNSK006217:96159..96415 -
Alignment locationNSK006217t:96159..96415 -
Alignment locationNSK006218:96375..96574 -
Alignment locationNSK006218t:96375..96574 -
Alignment locationNSK006219:97288..98527 -
Alignment locationNSK006219t:97288..98527 -
Alignment locationNSK006220:98695..98931 -
Alignment locationNSK006220t:98695..98931 -
Alignment locationNSK006221:99618..100913 +
Alignment locationNSK006221t:99618..100913 +
Alignment locationNSK006222:101496..103276 -
Alignment locationNSK006222t:101496..103276 -
Alignment locationNSK006223:103900..110798 +
Alignment locationNSK006223t:103900..110798 +
Alignment locationNSK006224:111425..113622 +
Alignment locationNSK006224t:111425..113622 +
Alignment locationNSK006225:113922..115536 -
Alignment locationNSK006225t:113922..115536 -
Alignment locationNSK006226:114022..115269 -
Alignment locationNSK006226t:114022..115269 -
Alignment locationNSK006227:115825..117289 +
Alignment locationNSK006227t:115825..117289 +
Alignment locationNSK006228:117887..119707 +
Alignment locationNSK006228t:117887..119707 +
Alignment locationNSK006229:120150..122149 -
Alignment locationNSK006229t:120150..122149 -
Alignment locationNSK006230:122601..122976 +
Alignment locationNSK006230t:122601..122976 +
Alignment locationNSK006231:123288..125240 -
Alignment locationNSK006231t:123288..125240 -
Alignment locationNSK006232:125618..128528 -
Alignment locationNSK006232t:125618..128528 -
Alignment locationNSK006233:128223..128427 -
Alignment locationNSK006233t:128223..128427 -
Alignment locationNSK006234:132188..132818 +
Alignment locationNSK006234t:132188..132818 +
Alignment locationNSK006235:133658..134322 -
Alignment locationNSK006235t:133658..134322 -
Alignment locationNSK006236:134347..134667 +
Alignment locationNSK006236t:134347..134667 +
Alignment locationNSK006237:135539..136180 -
Alignment locationNSK006237t:135539..136180 -
Alignment locationNSK006238:138534..142068 +
Alignment locationNSK006238t:138534..142068 +
Alignment locationNSK006239:142857..143733 +
Alignment locationNSK006239t:142857..143733 +
Alignment locationNSK006240:143956..145020 +
Alignment locationNSK006240t:143956..145020 +
Alignment locationNSK006241:144991..145193 -
Alignment locationNSK006241t:144991..145193 -
Alignment locationNSK006242:145145..145583 +
Alignment locationNSK006242t:145145..145583 +
Alignment locationnonsR117:51952..125240 +
Alignment locationnonsR137:73..44943 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NSK006181geneNSK006181:72..1402 -
NSK006181tmRNANSK006181t:72..1402 -
NSK006182geneNSK006182:733..935 +
NSK006182tmRNANSK006182t:733..935 +
NSK006183geneNSK006183:2025..2539 +
NSK006183tmRNANSK006183t:2025..2539 +
NSK006184geneNSK006184:2471..4079 -
NSK006184tmRNANSK006184t:2471..4079 -
NSK006185geneNSK006185:4618..6750 -
NSK006185tmRNANSK006185t:4618..6750 -
NSK006186geneNSK006186:7312..10290 +
NSK006186tmRNANSK006186t:7312..10290 +
NSK006187geneNSK006187:10692..13502 -
NSK006187tmRNANSK006187t:10692..13502 -
NSK006188geneNSK006188:14642..17726 -
NSK006188tmRNANSK006188t:14642..17726 -
NSK006189geneNSK006189:14681..17393 +
NSK006189tmRNANSK006189t:14681..17393 +
NSK006190geneNSK006190:18141..19543 -
NSK006190tmRNANSK006190t:18141..19543 -
NSK006191geneNSK006191:20402..21627 +
NSK006191tmRNANSK006191t:20402..21627 +
NSK006192geneNSK006192:21513..22133 -
NSK006192tmRNANSK006192t:21513..22133 -
NSK006193geneNSK006193:23006..25310 -
NSK006193tmRNANSK006193t:23006..25310 -
NSK006194geneNSK006194:26064..26480 -
NSK006194tmRNANSK006194t:26064..26480 -
NSK006195geneNSK006195:26848..27854 -
NSK006195tmRNANSK006195t:26848..27854 -
NSK006196geneNSK006196:30576..36129 +
NSK006196tmRNANSK006196t:30576..36129 +
NSK006197geneNSK006197:36799..38209 -
NSK006197tmRNANSK006197t:36799..38209 -
NSK006198geneNSK006198:37974..42810 +
NSK006198tmRNANSK006198t:37974..42810 +
NSK006199geneNSK006199:43040..44943 -
NSK006199tmRNANSK006199t:43040..44943 -
NSK006200geneNSK006200:51951..53789 -
NSK006200tmRNANSK006200t:51951..53789 -
NSK006201geneNSK006201:54679..57177 -
NSK006201tmRNANSK006201t:54679..57177 -
NSK006202geneNSK006202:57593..58043 +
NSK006202tmRNANSK006202t:57593..58043 +
NSK006203geneNSK006203:58185..59816 -
NSK006203tmRNANSK006203t:58185..59816 -
NSK006204geneNSK006204:60183..68995 +
NSK006204tmRNANSK006204t:60183..68995 +
NSK006205geneNSK006205:65323..65888 -
NSK006205tmRNANSK006205t:65323..65888 -
NSK006206geneNSK006206:69329..71291 -
NSK006206tmRNANSK006206t:69329..71291 -
NSK006207geneNSK006207:71628..73270 +
NSK006207tmRNANSK006207t:71628..73270 +
NSK006208geneNSK006208:73525..75664 -
NSK006208tmRNANSK006208t:73525..75664 -
NSK006209geneNSK006209:76060..77420 -
NSK006209tmRNANSK006209t:76060..77420 -
NSK006210geneNSK006210:76475..77092 -
NSK006210tmRNANSK006210t:76475..77092 -
NSK006211geneNSK006211:77514..77735 +
NSK006211tmRNANSK006211t:77514..77735 +
NSK006212geneNSK006212:78745..79341 -
NSK006212tmRNANSK006212t:78745..79341 -
NSK006213geneNSK006213:79949..81671 -
NSK006213tmRNANSK006213t:79949..81671 -
NSK006214geneNSK006214:81879..84875 -
NSK006214tmRNANSK006214t:81879..84875 -
NSK006215geneNSK006215:87114..92975 +
NSK006215tmRNANSK006215t:87114..92975 +
NSK006216geneNSK006216:94906..96427 -
NSK006216tmRNANSK006216t:94906..96427 -
NSK006217geneNSK006217:96159..96415 -
NSK006217tmRNANSK006217t:96159..96415 -
NSK006218geneNSK006218:96375..96574 -
NSK006218tmRNANSK006218t:96375..96574 -
NSK006219geneNSK006219:97288..98527 -
NSK006219tmRNANSK006219t:97288..98527 -
NSK006220geneNSK006220:98695..98931 -
NSK006220tmRNANSK006220t:98695..98931 -
NSK006221geneNSK006221:99618..100913 +
NSK006221tmRNANSK006221t:99618..100913 +
NSK006222geneNSK006222:101496..103276 -
NSK006222tmRNANSK006222t:101496..103276 -
NSK006223geneNSK006223:103900..110798 +
NSK006223tmRNANSK006223t:103900..110798 +
NSK006224geneNSK006224:111425..113622 +
NSK006224tmRNANSK006224t:111425..113622 +
NSK006225geneNSK006225:113922..115536 -
NSK006225tmRNANSK006225t:113922..115536 -
NSK006226geneNSK006226:114022..115269 -
NSK006226tmRNANSK006226t:114022..115269 -
NSK006227geneNSK006227:115825..117289 +
NSK006227tmRNANSK006227t:115825..117289 +
NSK006228geneNSK006228:117887..119707 +
NSK006228tmRNANSK006228t:117887..119707 +
NSK006229geneNSK006229:120150..122149 -
NSK006229tmRNANSK006229t:120150..122149 -
NSK006230geneNSK006230:122601..122976 +
NSK006230tmRNANSK006230t:122601..122976 +
NSK006231geneNSK006231:123288..125240 -
NSK006231tmRNANSK006231t:123288..125240 -
NSK006232geneNSK006232:125618..128528 -
NSK006232tmRNANSK006232t:125618..128528 -
NSK006233geneNSK006233:128223..128427 -
NSK006233tmRNANSK006233t:128223..128427 -
NSK006234geneNSK006234:132188..132818 +
NSK006234tmRNANSK006234t:132188..132818 +
NSK006235geneNSK006235:133658..134322 -
NSK006235tmRNANSK006235t:133658..134322 -
NSK006236geneNSK006236:134347..134667 +
NSK006236tmRNANSK006236t:134347..134667 +
NSK006237geneNSK006237:135539..136180 -
NSK006237tmRNANSK006237t:135539..136180 -
NSK006238geneNSK006238:138534..142068 +
NSK006238tmRNANSK006238t:138534..142068 +
NSK006239geneNSK006239:142857..143733 +
NSK006239tmRNANSK006239t:142857..143733 +
NSK006240geneNSK006240:143956..145020 +
NSK006240tmRNANSK006240t:143956..145020 +
NSK006241geneNSK006241:144991..145193 -
NSK006241tmRNANSK006241t:144991..145193 -
NSK006242geneNSK006242:145145..145583 +
NSK006242tmRNANSK006242t:145145..145583 +
nonsR117syntenic_regionnonsR117:51952..125240 +
nonsR137syntenic_regionnonsR137:73..44943 +
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Genome assembly for N. salina CCMP1776 (version 2)2019-10-08
Annotated Terms
Homology
Relationships
Sequences
Synonyms
Publications