scaffold32, scaffold32 (supercontig) Nannochloropsis salina

Overview
Namescaffold32
Unique Namescaffold32
Typesupercontig
OrganismNannochloropsis salina (N. salina CCMP1776)
Sequence length148515
Alignment locationNSK006111:423..1325 +
Alignment locationNSK006111t:423..1325 +
Alignment locationNSK006112:1488..2321 +
Alignment locationNSK006112t:1488..2321 +
Alignment locationNSK006113:3592..4638 -
Alignment locationNSK006113t:3592..4638 -
Alignment locationNSK006114:4693..5168 -
Alignment locationNSK006114t:4693..5168 -
Alignment locationNSK006115:5488..7737 +
Alignment locationNSK006115t:5488..7737 +
Alignment locationNSK006116:8401..9533 -
Alignment locationNSK006116t:8401..9533 -
Alignment locationNSK006117:9666..10767 +
Alignment locationNSK006117t:9666..10767 +
Alignment locationNSK006118:11369..12266 -
Alignment locationNSK006118t:11369..12266 -
Alignment locationNSK006119:12269..13077 -
Alignment locationNSK006119t:12269..13077 -
Alignment locationNSK006120:13082..13665 +
Alignment locationNSK006120t:13082..13665 +
Alignment locationNSK006121:13926..14789 -
Alignment locationNSK006121t:13926..14789 -
Alignment locationNSK006122:15441..15904 +
Alignment locationNSK006122t:15441..15904 +
Alignment locationNSK006123:15557..16160 -
Alignment locationNSK006123t:15557..16160 -
Alignment locationNSK006124:17933..18829 +
Alignment locationNSK006124t:17933..18829 +
Alignment locationNSK006125:19214..21847 +
Alignment locationNSK006125t:19214..21847 +
Alignment locationNSK006126:22465..27074 -
Alignment locationNSK006126t:22465..27074 -
Alignment locationNSK006127:27763..30912 -
Alignment locationNSK006127t:27763..30912 -
Alignment locationNSK006128:31401..33870 +
Alignment locationNSK006128t:31401..33870 +
Alignment locationNSK006129:34562..36879 -
Alignment locationNSK006129t:34562..36879 -
Alignment locationNSK006130:37361..39386 +
Alignment locationNSK006130t:37361..39386 +
Alignment locationNSK006131:39569..40248 +
Alignment locationNSK006131t:39569..40248 +
Alignment locationNSK006132:40294..46954 -
Alignment locationNSK006132t:40294..46954 -
Alignment locationNSK006133:43839..44344 -
Alignment locationNSK006133t:43839..44344 -
Alignment locationNSK006134:47102..50249 +
Alignment locationNSK006134t:47102..50249 +
Alignment locationNSK006135:51079..52040 +
Alignment locationNSK006135t:51079..52040 +
Alignment locationNSK006136:52971..56954 -
Alignment locationNSK006136t:52971..56954 -
Alignment locationNSK006137:57665..58035 -
Alignment locationNSK006137t:57665..58035 -
Alignment locationNSK006138:57851..60539 -
Alignment locationNSK006138t:57851..60539 -
Alignment locationNSK006139:60918..64468 +
Alignment locationNSK006139t:60918..64468 +
Alignment locationNSK006140:66694..69168 +
Alignment locationNSK006140t:66694..69168 +
Alignment locationNSK006141:70234..70809 +
Alignment locationNSK006141t:70234..70809 +
Alignment locationNSK006142:70393..70644 +
Alignment locationNSK006142t:70393..70644 +
Alignment locationNSK006143:70997..72394 -
Alignment locationNSK006143t:70997..72394 -
Alignment locationNSK006144:72810..73608 +
Alignment locationNSK006144t:72810..73608 +
Alignment locationNSK006145:73869..74529 +
Alignment locationNSK006145t:73869..74529 +
Alignment locationNSK006146:74584..75015 +
Alignment locationNSK006146t:74584..75015 +
Alignment locationNSK006147:76052..76874 +
Alignment locationNSK006147t:76052..76874 +
Alignment locationNSK006148:77912..78560 +
Alignment locationNSK006148t:77912..78560 +
Alignment locationNSK006149:79606..80341 +
Alignment locationNSK006149t:79606..80341 +
Alignment locationNSK006150:80432..82857 +
Alignment locationNSK006150t:80432..82857 +
Alignment locationNSK006151:83900..84668 +
Alignment locationNSK006151t:83900..84668 +
Alignment locationNSK006152:85705..86668 +
Alignment locationNSK006152t:85705..86668 +
Alignment locationNSK006153:87703..88546 +
Alignment locationNSK006153t:87703..88546 +
Alignment locationNSK006154:89583..90261 +
Alignment locationNSK006154t:89583..90261 +
Alignment locationNSK006155:91298..91976 +
Alignment locationNSK006155t:91298..91976 +
Alignment locationNSK006156:93020..93668 +
Alignment locationNSK006156t:93020..93668 +
Alignment locationNSK006157:94714..95557 +
Alignment locationNSK006157t:94714..95557 +
Alignment locationNSK006158:96597..97386 +
Alignment locationNSK006158t:96597..97386 +
Alignment locationNSK006159:98424..99204 +
Alignment locationNSK006159t:98424..99204 +
Alignment locationNSK006160:100244..100991 +
Alignment locationNSK006160t:100244..100991 +
Alignment locationNSK006161:102028..102742 +
Alignment locationNSK006161t:102028..102742 +
Alignment locationNSK006162:103777..104491 +
Alignment locationNSK006162t:103777..104491 +
Alignment locationNSK006163:105536..106346 +
Alignment locationNSK006163t:105536..106346 +
Alignment locationNSK006164:106911..108118 +
Alignment locationNSK006164t:106911..108118 +
Alignment locationNSK006165:109155..109956 +
Alignment locationNSK006165t:109155..109956 +
Alignment locationNSK006166:110990..111791 +
Alignment locationNSK006166t:110990..111791 +
Alignment locationNSK006167:112828..113704 +
Alignment locationNSK006167t:112828..113704 +
Alignment locationNSK006168:114744..115527 +
Alignment locationNSK006168t:114744..115527 +
Alignment locationNSK006169:116563..117406 +
Alignment locationNSK006169t:116563..117406 +
Alignment locationNSK006170:118445..119234 +
Alignment locationNSK006170t:118445..119234 +
Alignment locationNSK006171:120273..120975 +
Alignment locationNSK006171t:120273..120975 +
Alignment locationNSK006172:122023..122683 +
Alignment locationNSK006172t:122023..122683 +
Alignment locationNSK006173:123726..124419 +
Alignment locationNSK006173t:123726..124419 +
Alignment locationNSK006174:124943..126160 +
Alignment locationNSK006174t:124943..126160 +
Alignment locationNSK006175:127204..127852 +
Alignment locationNSK006175t:127204..127852 +
Alignment locationNSK006176:128901..129497 +
Alignment locationNSK006176t:128901..129497 +
Alignment locationNSK006177:130468..130872 -
Alignment locationNSK006177t:130468..130872 -
Alignment locationNSK006178:137011..137941 +
Alignment locationNSK006178t:137011..137941 +
Alignment locationNSK006179:138303..145263 +
Alignment locationNSK006179t:138303..145263 +
Alignment locationNSK006180:145726..147398 -
Alignment locationNSK006180t:145726..147398 -
Alignment locationnonsR051:3593..64468 -
Alignment locationnonsR092:73870..120975 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NSK006111geneNSK006111:423..1325 +
NSK006111tmRNANSK006111t:423..1325 +
NSK006112geneNSK006112:1488..2321 +
NSK006112tmRNANSK006112t:1488..2321 +
NSK006113geneNSK006113:3592..4638 -
NSK006113tmRNANSK006113t:3592..4638 -
NSK006114geneNSK006114:4693..5168 -
NSK006114tmRNANSK006114t:4693..5168 -
NSK006115geneNSK006115:5488..7737 +
NSK006115tmRNANSK006115t:5488..7737 +
NSK006116geneNSK006116:8401..9533 -
NSK006116tmRNANSK006116t:8401..9533 -
NSK006117geneNSK006117:9666..10767 +
NSK006117tmRNANSK006117t:9666..10767 +
NSK006118geneNSK006118:11369..12266 -
NSK006118tmRNANSK006118t:11369..12266 -
NSK006119geneNSK006119:12269..13077 -
NSK006119tmRNANSK006119t:12269..13077 -
NSK006120geneNSK006120:13082..13665 +
NSK006120tmRNANSK006120t:13082..13665 +
NSK006121geneNSK006121:13926..14789 -
NSK006121tmRNANSK006121t:13926..14789 -
NSK006122geneNSK006122:15441..15904 +
NSK006122tmRNANSK006122t:15441..15904 +
NSK006123geneNSK006123:15557..16160 -
NSK006123tmRNANSK006123t:15557..16160 -
NSK006124geneNSK006124:17933..18829 +
NSK006124tmRNANSK006124t:17933..18829 +
NSK006125geneNSK006125:19214..21847 +
NSK006125tmRNANSK006125t:19214..21847 +
NSK006126geneNSK006126:22465..27074 -
NSK006126tmRNANSK006126t:22465..27074 -
NSK006127geneNSK006127:27763..30912 -
NSK006127tmRNANSK006127t:27763..30912 -
NSK006128geneNSK006128:31401..33870 +
NSK006128tmRNANSK006128t:31401..33870 +
NSK006129geneNSK006129:34562..36879 -
NSK006129tmRNANSK006129t:34562..36879 -
NSK006130geneNSK006130:37361..39386 +
NSK006130tmRNANSK006130t:37361..39386 +
NSK006131geneNSK006131:39569..40248 +
NSK006131tmRNANSK006131t:39569..40248 +
NSK006132geneNSK006132:40294..46954 -
NSK006132tmRNANSK006132t:40294..46954 -
NSK006133geneNSK006133:43839..44344 -
NSK006133tmRNANSK006133t:43839..44344 -
NSK006134geneNSK006134:47102..50249 +
NSK006134tmRNANSK006134t:47102..50249 +
NSK006135geneNSK006135:51079..52040 +
NSK006135tmRNANSK006135t:51079..52040 +
NSK006136geneNSK006136:52971..56954 -
NSK006136tmRNANSK006136t:52971..56954 -
NSK006137geneNSK006137:57665..58035 -
NSK006137tmRNANSK006137t:57665..58035 -
NSK006138geneNSK006138:57851..60539 -
NSK006138tmRNANSK006138t:57851..60539 -
NSK006139geneNSK006139:60918..64468 +
NSK006139tmRNANSK006139t:60918..64468 +
NSK006140geneNSK006140:66694..69168 +
NSK006140tmRNANSK006140t:66694..69168 +
NSK006141geneNSK006141:70234..70809 +
NSK006141tmRNANSK006141t:70234..70809 +
NSK006142geneNSK006142:70393..70644 +
NSK006142tmRNANSK006142t:70393..70644 +
NSK006143geneNSK006143:70997..72394 -
NSK006143tmRNANSK006143t:70997..72394 -
NSK006144geneNSK006144:72810..73608 +
NSK006144tmRNANSK006144t:72810..73608 +
NSK006145geneNSK006145:73869..74529 +
NSK006145tmRNANSK006145t:73869..74529 +
NSK006146geneNSK006146:74584..75015 +
NSK006146tmRNANSK006146t:74584..75015 +
NSK006147geneNSK006147:76052..76874 +
NSK006147tmRNANSK006147t:76052..76874 +
NSK006148geneNSK006148:77912..78560 +
NSK006148tmRNANSK006148t:77912..78560 +
NSK006149geneNSK006149:79606..80341 +
NSK006149tmRNANSK006149t:79606..80341 +
NSK006150geneNSK006150:80432..82857 +
NSK006150tmRNANSK006150t:80432..82857 +
NSK006151geneNSK006151:83900..84668 +
NSK006151tmRNANSK006151t:83900..84668 +
NSK006152geneNSK006152:85705..86668 +
NSK006152tmRNANSK006152t:85705..86668 +
NSK006153geneNSK006153:87703..88546 +
NSK006153tmRNANSK006153t:87703..88546 +
NSK006154geneNSK006154:89583..90261 +
NSK006154tmRNANSK006154t:89583..90261 +
NSK006155geneNSK006155:91298..91976 +
NSK006155tmRNANSK006155t:91298..91976 +
NSK006156geneNSK006156:93020..93668 +
NSK006156tmRNANSK006156t:93020..93668 +
NSK006157geneNSK006157:94714..95557 +
NSK006157tmRNANSK006157t:94714..95557 +
NSK006158geneNSK006158:96597..97386 +
NSK006158tmRNANSK006158t:96597..97386 +
NSK006159geneNSK006159:98424..99204 +
NSK006159tmRNANSK006159t:98424..99204 +
NSK006160geneNSK006160:100244..100991 +
NSK006160tmRNANSK006160t:100244..100991 +
NSK006161geneNSK006161:102028..102742 +
NSK006161tmRNANSK006161t:102028..102742 +
NSK006162geneNSK006162:103777..104491 +
NSK006162tmRNANSK006162t:103777..104491 +
NSK006163geneNSK006163:105536..106346 +
NSK006163tmRNANSK006163t:105536..106346 +
NSK006164geneNSK006164:106911..108118 +
NSK006164tmRNANSK006164t:106911..108118 +
NSK006165geneNSK006165:109155..109956 +
NSK006165tmRNANSK006165t:109155..109956 +
NSK006166geneNSK006166:110990..111791 +
NSK006166tmRNANSK006166t:110990..111791 +
NSK006167geneNSK006167:112828..113704 +
NSK006167tmRNANSK006167t:112828..113704 +
NSK006168geneNSK006168:114744..115527 +
NSK006168tmRNANSK006168t:114744..115527 +
NSK006169geneNSK006169:116563..117406 +
NSK006169tmRNANSK006169t:116563..117406 +
NSK006170geneNSK006170:118445..119234 +
NSK006170tmRNANSK006170t:118445..119234 +
NSK006171geneNSK006171:120273..120975 +
NSK006171tmRNANSK006171t:120273..120975 +
NSK006172geneNSK006172:122023..122683 +
NSK006172tmRNANSK006172t:122023..122683 +
NSK006173geneNSK006173:123726..124419 +
NSK006173tmRNANSK006173t:123726..124419 +
NSK006174geneNSK006174:124943..126160 +
NSK006174tmRNANSK006174t:124943..126160 +
NSK006175geneNSK006175:127204..127852 +
NSK006175tmRNANSK006175t:127204..127852 +
NSK006176geneNSK006176:128901..129497 +
NSK006176tmRNANSK006176t:128901..129497 +
NSK006177geneNSK006177:130468..130872 -
NSK006177tmRNANSK006177t:130468..130872 -
NSK006178geneNSK006178:137011..137941 +
NSK006178tmRNANSK006178t:137011..137941 +
NSK006179geneNSK006179:138303..145263 +
NSK006179tmRNANSK006179t:138303..145263 +
NSK006180geneNSK006180:145726..147398 -
NSK006180tmRNANSK006180t:145726..147398 -
nonsR051syntenic_regionnonsR051:3593..64468 -
nonsR092syntenic_regionnonsR092:73870..120975 +
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Genome assembly for N. salina CCMP1776 (version 2)2019-10-08
Annotated Terms
Homology
Relationships
Sequences
Synonyms
Publications