scaffold27, scaffold27 (supercontig) Nannochloropsis salina

Overview
Namescaffold27
Unique Namescaffold27
Typesupercontig
OrganismNannochloropsis salina (N. salina CCMP1776)
Sequence length207648
Alignment locationNSK004950:192..1226 +
Alignment locationNSK004950t:192..1226 +
Alignment locationNSK004951:1171..1531 -
Alignment locationNSK004951t:1171..1531 -
Alignment locationNSK004952:5802..6671 -
Alignment locationNSK004952t:5802..6671 -
Alignment locationNSK004953:6861..7585 +
Alignment locationNSK004953t:6861..7585 +
Alignment locationNSK004954:7727..9438 -
Alignment locationNSK004954t:7727..9438 -
Alignment locationNSK004955:10180..10909 -
Alignment locationNSK004955t:10180..10909 -
Alignment locationNSK004956:11958..13240 -
Alignment locationNSK004956t:11958..13240 -
Alignment locationNSK004957:13755..18092 -
Alignment locationNSK004957t:13755..18092 -
Alignment locationNSK004958:19105..19960 -
Alignment locationNSK004958t:19105..19960 -
Alignment locationNSK004959:20897..21548 -
Alignment locationNSK004959t:20897..21548 -
Alignment locationNSK004960:21655..22924 +
Alignment locationNSK004960t:21655..22924 +
Alignment locationNSK004961:23288..23465 -
Alignment locationNSK004961t:23288..23465 -
Alignment locationNSK004962:24669..33846 +
Alignment locationNSK004962t:24669..33846 +
Alignment locationNSK004963:35284..44394 +
Alignment locationNSK004963t:35284..44394 +
Alignment locationNSK004964:44654..46801 -
Alignment locationNSK004964t:44654..46801 -
Alignment locationNSK004965:46879..49784 +
Alignment locationNSK004965t:46879..49784 +
Alignment locationNSK004966:49972..55717 -
Alignment locationNSK004966t:49972..55717 -
Alignment locationNSK004967:55969..57602 +
Alignment locationNSK004967t:55969..57602 +
Alignment locationNSK004968:58648..61205 +
Alignment locationNSK004968t:58648..61205 +
Alignment locationNSK004969:61539..68358 -
Alignment locationNSK004969t:61539..68358 -
Alignment locationNSK004970:69014..71118 +
Alignment locationNSK004970t:69014..71118 +
Alignment locationNSK004971:71438..77317 -
Alignment locationNSK004971t:71438..77317 -
Alignment locationNSK004972:78006..94912 +
Alignment locationNSK004972t:78006..94912 +
Alignment locationNSK004973:94941..97661 +
Alignment locationNSK004973t:94941..97661 +
Alignment locationNSK004974:98323..101096 +
Alignment locationNSK004974t:98323..101096 +
Alignment locationNSK004975:101601..102521 -
Alignment locationNSK004975t:101601..102521 -
Alignment locationNSK004976:102423..102711 -
Alignment locationNSK004976t:102423..102711 -
Alignment locationNSK004977:103306..104028 -
Alignment locationNSK004977t:103306..104028 -
Alignment locationNSK004978:104675..105939 +
Alignment locationNSK004978t:104675..105939 +
Alignment locationNSK004979:106605..111529 +
Alignment locationNSK004979t:106605..111529 +
Alignment locationNSK004980:111610..111981 +
Alignment locationNSK004980t:111610..111981 +
Alignment locationNSK004981:112190..116333 -
Alignment locationNSK004981t:112190..116333 -
Alignment locationNSK004982:117132..118634 +
Alignment locationNSK004982t:117132..118634 +
Alignment locationNSK004983:119139..119499 +
Alignment locationNSK004983t:119139..119499 +
Alignment locationNSK004984:120623..123844 -
Alignment locationNSK004984t:120623..123844 -
Alignment locationNSK004985:124339..125174 +
Alignment locationNSK004985t:124339..125174 +
Alignment locationNSK004986:125295..125878 +
Alignment locationNSK004986t:125295..125878 +
Alignment locationNSK004987:125724..126026 -
Alignment locationNSK004987t:125724..126026 -
Alignment locationNSK004988:126060..126265 -
Alignment locationNSK004988t:126060..126265 -
Alignment locationNSK004989:126230..126551 +
Alignment locationNSK004989t:126230..126551 +
Alignment locationNSK004990:126602..127969 -
Alignment locationNSK004990t:126602..127969 -
Alignment locationNSK004991:128420..129915 -
Alignment locationNSK004991t:128420..129915 -
Alignment locationNSK004992:129950..130828 -
Alignment locationNSK004992t:129950..130828 -
Alignment locationNSK004993:131055..135411 +
Alignment locationNSK004993t:131055..135411 +
Alignment locationNSK004994:136448..137887 +
Alignment locationNSK004994t:136448..137887 +
Alignment locationNSK004995:138884..139680 -
Alignment locationNSK004995t:138884..139680 -
Alignment locationNSK004996:141169..143336 +
Alignment locationNSK004996t:141169..143336 +
Alignment locationNSK004997:143889..145549 -
Alignment locationNSK004997t:143889..145549 -
Alignment locationNSK004998:146658..147449 +
Alignment locationNSK004998t:146658..147449 +
Alignment locationNSK004999:148086..152378 -
Alignment locationNSK004999t:148086..152378 -
Alignment locationNSK005000:153123..155124 +
Alignment locationNSK005000t:153123..155124 +
Alignment locationNSK005001:156346..160892 +
Alignment locationNSK005001t:156346..160892 +
Alignment locationNSK005002:161457..162262 -
Alignment locationNSK005002t:161457..162262 -
Alignment locationNSK005003:162321..162533 -
Alignment locationNSK005003t:162321..162533 -
Alignment locationNSK005004:162871..166180 +
Alignment locationNSK005004t:162871..166180 +
Alignment locationNSK005005:167264..171654 +
Alignment locationNSK005005t:167264..171654 +
Alignment locationNSK005006:172203..173144 -
Alignment locationNSK005006t:172203..173144 -
Alignment locationNSK005007:173850..174697 +
Alignment locationNSK005007t:173850..174697 +
Alignment locationNSK005008:174961..175647 +
Alignment locationNSK005008t:174961..175647 +
Alignment locationNSK005009:176171..179342 +
Alignment locationNSK005009t:176171..179342 +
Alignment locationNSK005010:180590..183006 +
Alignment locationNSK005010t:180590..183006 +
Alignment locationNSK005011:182938..183178 -
Alignment locationNSK005011t:182938..183178 -
Alignment locationNSK005012:183528..184660 -
Alignment locationNSK005012t:183528..184660 -
Alignment locationNSK005013:185342..187450 -
Alignment locationNSK005013t:185342..187450 -
Alignment locationNSK005014:188267..190948 +
Alignment locationNSK005014t:188267..190948 +
Alignment locationNSK005015:191420..192037 -
Alignment locationNSK005015t:191420..192037 -
Alignment locationNSK005016:192900..194177 +
Alignment locationNSK005016t:192900..194177 +
Alignment locationNSK005017:194838..197711 -
Alignment locationNSK005017t:194838..197711 -
Alignment locationNSK005018:198620..201586 +
Alignment locationNSK005018t:198620..201586 +
Alignment locationNSK005019:202457..203630 +
Alignment locationNSK005019t:202457..203630 +
Alignment locationNSK005020:204168..204610 +
Alignment locationNSK005020t:204168..204610 +
Alignment locationNSK005021:204965..206954 +
Alignment locationNSK005021t:204965..206954 +
Alignment locationnonsR073:5803..145549 +
Alignment locationnonsR074:148087..206954 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NSK004950geneNSK004950:192..1226 +
NSK004950tmRNANSK004950t:192..1226 +
NSK004951geneNSK004951:1171..1531 -
NSK004951tmRNANSK004951t:1171..1531 -
NSK004952geneNSK004952:5802..6671 -
NSK004952tmRNANSK004952t:5802..6671 -
NSK004953geneNSK004953:6861..7585 +
NSK004953tmRNANSK004953t:6861..7585 +
NSK004954geneNSK004954:7727..9438 -
NSK004954tmRNANSK004954t:7727..9438 -
NSK004955geneNSK004955:10180..10909 -
NSK004955tmRNANSK004955t:10180..10909 -
NSK004956geneNSK004956:11958..13240 -
NSK004956tmRNANSK004956t:11958..13240 -
NSK004957geneNSK004957:13755..18092 -
NSK004957tmRNANSK004957t:13755..18092 -
NSK004958geneNSK004958:19105..19960 -
NSK004958tmRNANSK004958t:19105..19960 -
NSK004959geneNSK004959:20897..21548 -
NSK004959tmRNANSK004959t:20897..21548 -
NSK004960geneNSK004960:21655..22924 +
NSK004960tmRNANSK004960t:21655..22924 +
NSK004961geneNSK004961:23288..23465 -
NSK004961tmRNANSK004961t:23288..23465 -
NSK004962geneNSK004962:24669..33846 +
NSK004962tmRNANSK004962t:24669..33846 +
NSK004963geneNSK004963:35284..44394 +
NSK004963tmRNANSK004963t:35284..44394 +
NSK004964geneNSK004964:44654..46801 -
NSK004964tmRNANSK004964t:44654..46801 -
NSK004965geneNSK004965:46879..49784 +
NSK004965tmRNANSK004965t:46879..49784 +
NSK004966geneNSK004966:49972..55717 -
NSK004966tmRNANSK004966t:49972..55717 -
NSK004967geneNSK004967:55969..57602 +
NSK004967tmRNANSK004967t:55969..57602 +
NSK004968geneNSK004968:58648..61205 +
NSK004968tmRNANSK004968t:58648..61205 +
NSK004969geneNSK004969:61539..68358 -
NSK004969tmRNANSK004969t:61539..68358 -
NSK004970geneNSK004970:69014..71118 +
NSK004970tmRNANSK004970t:69014..71118 +
NSK004971geneNSK004971:71438..77317 -
NSK004971tmRNANSK004971t:71438..77317 -
NSK004972geneNSK004972:78006..94912 +
NSK004972tmRNANSK004972t:78006..94912 +
NSK004973geneNSK004973:94941..97661 +
NSK004973tmRNANSK004973t:94941..97661 +
NSK004974geneNSK004974:98323..101096 +
NSK004974tmRNANSK004974t:98323..101096 +
NSK004975geneNSK004975:101601..102521 -
NSK004975tmRNANSK004975t:101601..102521 -
NSK004976geneNSK004976:102423..102711 -
NSK004976tmRNANSK004976t:102423..102711 -
NSK004977geneNSK004977:103306..104028 -
NSK004977tmRNANSK004977t:103306..104028 -
NSK004978geneNSK004978:104675..105939 +
NSK004978tmRNANSK004978t:104675..105939 +
NSK004979geneNSK004979:106605..111529 +
NSK004979tmRNANSK004979t:106605..111529 +
NSK004980geneNSK004980:111610..111981 +
NSK004980tmRNANSK004980t:111610..111981 +
NSK004981geneNSK004981:112190..116333 -
NSK004981tmRNANSK004981t:112190..116333 -
NSK004982geneNSK004982:117132..118634 +
NSK004982tmRNANSK004982t:117132..118634 +
NSK004983geneNSK004983:119139..119499 +
NSK004983tmRNANSK004983t:119139..119499 +
NSK004984geneNSK004984:120623..123844 -
NSK004984tmRNANSK004984t:120623..123844 -
NSK004985geneNSK004985:124339..125174 +
NSK004985tmRNANSK004985t:124339..125174 +
NSK004986geneNSK004986:125295..125878 +
NSK004986tmRNANSK004986t:125295..125878 +
NSK004987geneNSK004987:125724..126026 -
NSK004987tmRNANSK004987t:125724..126026 -
NSK004988geneNSK004988:126060..126265 -
NSK004988tmRNANSK004988t:126060..126265 -
NSK004989geneNSK004989:126230..126551 +
NSK004989tmRNANSK004989t:126230..126551 +
NSK004990geneNSK004990:126602..127969 -
NSK004990tmRNANSK004990t:126602..127969 -
NSK004991geneNSK004991:128420..129915 -
NSK004991tmRNANSK004991t:128420..129915 -
NSK004992geneNSK004992:129950..130828 -
NSK004992tmRNANSK004992t:129950..130828 -
NSK004993geneNSK004993:131055..135411 +
NSK004993tmRNANSK004993t:131055..135411 +
NSK004994geneNSK004994:136448..137887 +
NSK004994tmRNANSK004994t:136448..137887 +
NSK004995geneNSK004995:138884..139680 -
NSK004995tmRNANSK004995t:138884..139680 -
NSK004996geneNSK004996:141169..143336 +
NSK004996tmRNANSK004996t:141169..143336 +
NSK004997geneNSK004997:143889..145549 -
NSK004997tmRNANSK004997t:143889..145549 -
NSK004998geneNSK004998:146658..147449 +
NSK004998tmRNANSK004998t:146658..147449 +
NSK004999geneNSK004999:148086..152378 -
NSK004999tmRNANSK004999t:148086..152378 -
NSK005000geneNSK005000:153123..155124 +
NSK005000tmRNANSK005000t:153123..155124 +
NSK005001geneNSK005001:156346..160892 +
NSK005001tmRNANSK005001t:156346..160892 +
NSK005002geneNSK005002:161457..162262 -
NSK005002tmRNANSK005002t:161457..162262 -
NSK005003geneNSK005003:162321..162533 -
NSK005003tmRNANSK005003t:162321..162533 -
NSK005004geneNSK005004:162871..166180 +
NSK005004tmRNANSK005004t:162871..166180 +
NSK005005geneNSK005005:167264..171654 +
NSK005005tmRNANSK005005t:167264..171654 +
NSK005006geneNSK005006:172203..173144 -
NSK005006tmRNANSK005006t:172203..173144 -
NSK005007geneNSK005007:173850..174697 +
NSK005007tmRNANSK005007t:173850..174697 +
NSK005008geneNSK005008:174961..175647 +
NSK005008tmRNANSK005008t:174961..175647 +
NSK005009geneNSK005009:176171..179342 +
NSK005009tmRNANSK005009t:176171..179342 +
NSK005010geneNSK005010:180590..183006 +
NSK005010tmRNANSK005010t:180590..183006 +
NSK005011geneNSK005011:182938..183178 -
NSK005011tmRNANSK005011t:182938..183178 -
NSK005012geneNSK005012:183528..184660 -
NSK005012tmRNANSK005012t:183528..184660 -
NSK005013geneNSK005013:185342..187450 -
NSK005013tmRNANSK005013t:185342..187450 -
NSK005014geneNSK005014:188267..190948 +
NSK005014tmRNANSK005014t:188267..190948 +
NSK005015geneNSK005015:191420..192037 -
NSK005015tmRNANSK005015t:191420..192037 -
NSK005016geneNSK005016:192900..194177 +
NSK005016tmRNANSK005016t:192900..194177 +
NSK005017geneNSK005017:194838..197711 -
NSK005017tmRNANSK005017t:194838..197711 -
NSK005018geneNSK005018:198620..201586 +
NSK005018tmRNANSK005018t:198620..201586 +
NSK005019geneNSK005019:202457..203630 +
NSK005019tmRNANSK005019t:202457..203630 +
NSK005020geneNSK005020:204168..204610 +
NSK005020tmRNANSK005020t:204168..204610 +
NSK005021geneNSK005021:204965..206954 +
NSK005021tmRNANSK005021t:204965..206954 +
nonsR073syntenic_regionnonsR073:5803..145549 +
nonsR074syntenic_regionnonsR074:148087..206954 -
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Genome assembly for N. salina CCMP1776 (version 2)2019-10-08
Annotated Terms
Homology
Relationships
Sequences
Synonyms
Publications