scaffold25, scaffold25 (supercontig) Nannochloropsis salina

Overview
Namescaffold25
Unique Namescaffold25
Typesupercontig
OrganismNannochloropsis salina (N. salina CCMP1776)
Sequence length257793
Alignment locationNSK004748:221..961 +
Alignment locationNSK004748t:221..961 +
Alignment locationNSK004749:1503..4386 -
Alignment locationNSK004749t:1503..4386 -
Alignment locationNSK004750:5596..8073 +
Alignment locationNSK004750t:5596..8073 +
Alignment locationNSK004751:8058..8388 -
Alignment locationNSK004751t:8058..8388 -
Alignment locationNSK004752:8411..8646 +
Alignment locationNSK004752t:8411..8646 +
Alignment locationNSK004753:8655..9143 +
Alignment locationNSK004753t:8655..9143 +
Alignment locationNSK004754:9338..10294 -
Alignment locationNSK004754t:9338..10294 -
Alignment locationNSK004755:10615..16360 -
Alignment locationNSK004755t:10615..16360 -
Alignment locationNSK004756:17262..18439 -
Alignment locationNSK004756t:17262..18439 -
Alignment locationNSK004757:20512..21845 +
Alignment locationNSK004757t:20512..21845 +
Alignment locationNSK004758:22689..24890 -
Alignment locationNSK004758t:22689..24890 -
Alignment locationNSK004759:25548..27427 +
Alignment locationNSK004759t:25548..27427 +
Alignment locationNSK004760:28132..33363 -
Alignment locationNSK004760t:28132..33363 -
Alignment locationNSK004761:35515..39136 +
Alignment locationNSK004761t:35515..39136 +
Alignment locationNSK004762:40716..42293 +
Alignment locationNSK004762t:40716..42293 +
Alignment locationNSK004763:43312..45372 +
Alignment locationNSK004763t:43312..45372 +
Alignment locationNSK004764:45589..46712 -
Alignment locationNSK004764t:45589..46712 -
Alignment locationNSK004765:47163..50427 -
Alignment locationNSK004765t:47163..50427 -
Alignment locationNSK004766:50842..51294 +
Alignment locationNSK004766t:50842..51294 +
Alignment locationNSK004767:51962..59272 -
Alignment locationNSK004767t:51962..59272 -
Alignment locationNSK004768:60088..64912 +
Alignment locationNSK004768t:60088..64912 +
Alignment locationNSK004769:65461..67852 -
Alignment locationNSK004769t:65461..67852 -
Alignment locationNSK004770:68662..68917 -
Alignment locationNSK004770t:68662..68917 -
Alignment locationNSK004771:69921..72889 +
Alignment locationNSK004771t:69921..72889 +
Alignment locationNSK004772:73559..79799 -
Alignment locationNSK004772t:73559..79799 -
Alignment locationNSK004773:80083..81306 +
Alignment locationNSK004773t:80083..81306 +
Alignment locationNSK004774:81664..82899 -
Alignment locationNSK004774t:81664..82899 -
Alignment locationNSK004775:83363..84867 +
Alignment locationNSK004775t:83363..84867 +
Alignment locationNSK004776:85101..85439 -
Alignment locationNSK004776t:85101..85439 -
Alignment locationNSK004777:85532..87322 +
Alignment locationNSK004777t:85532..87322 +
Alignment locationNSK004778:86465..86901 -
Alignment locationNSK004778t:86465..86901 -
Alignment locationNSK004779:88762..90708 +
Alignment locationNSK004779t:88762..90708 +
Alignment locationNSK004780:91188..92365 -
Alignment locationNSK004780t:91188..92365 -
Alignment locationNSK004781:93188..96169 -
Alignment locationNSK004781t:93188..96169 -
Alignment locationNSK004782:97455..98756 +
Alignment locationNSK004782t:97455..98756 +
Alignment locationNSK004783:99056..102160 -
Alignment locationNSK004783t:99056..102160 -
Alignment locationNSK004784:102497..102784 -
Alignment locationNSK004784t:102497..102784 -
Alignment locationNSK004785:103298..105215 -
Alignment locationNSK004785t:103298..105215 -
Alignment locationNSK004786:105304..105680 +
Alignment locationNSK004786t:105304..105680 +
Alignment locationNSK004787:106220..106729 +
Alignment locationNSK004787t:106220..106729 +
Alignment locationNSK004788:106972..108961 -
Alignment locationNSK004788t:106972..108961 -
Alignment locationNSK004789:109882..110412 -
Alignment locationNSK004789t:109882..110412 -
Alignment locationNSK004790:110294..112393 -
Alignment locationNSK004790t:110294..112393 -
Alignment locationNSK004791:112431..112926 +
Alignment locationNSK004791t:112431..112926 +
Alignment locationNSK004792:113104..120422 +
Alignment locationNSK004792t:113104..120422 +
Alignment locationNSK004793:120520..120827 +
Alignment locationNSK004793t:120520..120827 +
Alignment locationNSK004794:120994..121571 -
Alignment locationNSK004794t:120994..121571 -
Alignment locationNSK004795:122171..122617 -
Alignment locationNSK004795t:122171..122617 -
Alignment locationNSK004796:124297..124955 -
Alignment locationNSK004796t:124297..124955 -
Alignment locationNSK004797:125566..126228 +
Alignment locationNSK004797t:125566..126228 +
Alignment locationNSK004798:126520..130530 -
Alignment locationNSK004798t:126520..130530 -
Alignment locationNSK004799:131560..132276 -
Alignment locationNSK004799t:131560..132276 -
Alignment locationNSK004800:132565..133219 +
Alignment locationNSK004800t:132565..133219 +
Alignment locationNSK004801:133538..135784 -
Alignment locationNSK004801t:133538..135784 -
Alignment locationNSK004802:136388..137384 -
Alignment locationNSK004802t:136388..137384 -
Alignment locationNSK004803:137929..139269 +
Alignment locationNSK004803t:137929..139269 +
Alignment locationNSK004804:140272..141834 -
Alignment locationNSK004804t:140272..141834 -
Alignment locationNSK004805:142433..144079 -
Alignment locationNSK004805t:142433..144079 -
Alignment locationNSK004806:144121..148212 +
Alignment locationNSK004806t:144121..148212 +
Alignment locationNSK004807:148280..153111 +
Alignment locationNSK004807t:148280..153111 +
Alignment locationNSK004808:153634..156306 -
Alignment locationNSK004808t:153634..156306 -
Alignment locationNSK004809:156817..158680 +
Alignment locationNSK004809t:156817..158680 +
Alignment locationNSK004810:159403..160960 +
Alignment locationNSK004810t:159403..160960 +
Alignment locationNSK004811:161054..161754 -
Alignment locationNSK004811t:161054..161754 -
Alignment locationNSK004812:161755..162763 +
Alignment locationNSK004812t:161755..162763 +
Alignment locationNSK004813:163252..165946 +
Alignment locationNSK004813t:163252..165946 +
Alignment locationNSK004814:166440..167879 -
Alignment locationNSK004814t:166440..167879 -
Alignment locationNSK004815:168165..170624 +
Alignment locationNSK004815t:168165..170624 +
Alignment locationNSK004816:170770..172971 -
Alignment locationNSK004816t:170770..172971 -
Alignment locationNSK004817:173362..174657 -
Alignment locationNSK004817t:173362..174657 -
Alignment locationNSK004818:175022..177152 +
Alignment locationNSK004818t:175022..177152 +
Alignment locationNSK004819:178583..180142 +
Alignment locationNSK004819t:178583..180142 +
Alignment locationNSK004820:180335..183464 -
Alignment locationNSK004820t:180335..183464 -
Alignment locationNSK004821:183642..184730 +
Alignment locationNSK004821t:183642..184730 +
Alignment locationNSK004822:185159..186790 -
Alignment locationNSK004822t:185159..186790 -
Alignment locationNSK004823:187452..189319 +
Alignment locationNSK004823t:187452..189319 +
Alignment locationNSK004824:190083..191577 +
Alignment locationNSK004824t:190083..191577 +
Alignment locationNSK004825:192321..195305 -
Alignment locationNSK004825t:192321..195305 -
Alignment locationNSK004826:196191..198533 -
Alignment locationNSK004826t:196191..198533 -
Alignment locationNSK004827:199192..202584 +
Alignment locationNSK004827t:199192..202584 +
Alignment locationNSK004828:202702..204384 -
Alignment locationNSK004828t:202702..204384 -
Alignment locationNSK004829:204932..206173 +
Alignment locationNSK004829t:204932..206173 +
Alignment locationNSK004830:206630..208436 -
Alignment locationNSK004830t:206630..208436 -
Alignment locationNSK004831:208919..210438 +
Alignment locationNSK004831t:208919..210438 +
Alignment locationNSK004832:211276..212625 +
Alignment locationNSK004832t:211276..212625 +
Alignment locationNSK004833:213332..214887 +
Alignment locationNSK004833t:213332..214887 +
Alignment locationNSK004834:215478..217028 +
Alignment locationNSK004834t:215478..217028 +
Alignment locationNSK004835:217911..220185 +
Alignment locationNSK004835t:217911..220185 +
Alignment locationNSK004836:220856..222583 +
Alignment locationNSK004836t:220856..222583 +
Alignment locationNSK004837:222737..223912 -
Alignment locationNSK004837t:222737..223912 -
Alignment locationNSK004838:224888..226705 +
Alignment locationNSK004838t:224888..226705 +
Alignment locationNSK004839:226831..228461 -
Alignment locationNSK004839t:226831..228461 -
Alignment locationNSK004840:228734..229777 +
Alignment locationNSK004840t:228734..229777 +
Alignment locationNSK004841:230212..231139 -
Alignment locationNSK004841t:230212..231139 -
Alignment locationNSK004842:231570..232228 +
Alignment locationNSK004842t:231570..232228 +
Alignment locationNSK004843:233804..234011 -
Alignment locationNSK004843t:233804..234011 -
Alignment locationNSK004844:233953..237033 +
Alignment locationNSK004844t:233953..237033 +
Alignment locationNSK004845:237766..239653 +
Alignment locationNSK004845t:237766..239653 +
Alignment locationNSK004846:240057..241622 -
Alignment locationNSK004846t:240057..241622 -
Alignment locationNSK004847:241669..242756 +
Alignment locationNSK004847t:241669..242756 +
Alignment locationNSK004848:243010..243824 -
Alignment locationNSK004848t:243010..243824 -
Alignment locationNSK004849:244566..248975 +
Alignment locationNSK004849t:244566..248975 +
Alignment locationNSK004850:249084..250304 -
Alignment locationNSK004850t:249084..250304 -
Alignment locationNSK004851:250853..252276 -
Alignment locationNSK004851t:250853..252276 -
Alignment locationNSK004852:252679..252953 +
Alignment locationNSK004852t:252679..252953 +
Alignment locationNSK004853:253130..254196 +
Alignment locationNSK004853t:253130..254196 +
Alignment locationNSK004854:254423..254848 +
Alignment locationNSK004854t:254423..254848 +
Alignment locationNSK004855:255141..256958 +
Alignment locationNSK004855t:255141..256958 +
Alignment locationNSK004856:257213..257766 -
Alignment locationNSK004856t:257213..257766 -
Alignment locationnonsR041:148281..256958 +
Alignment locationnonsR042:190084..208436 -
Alignment locationnonsR158:1504..183464 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NSK004748geneNSK004748:221..961 +
NSK004748tmRNANSK004748t:221..961 +
NSK004749geneNSK004749:1503..4386 -
NSK004749tmRNANSK004749t:1503..4386 -
NSK004750geneNSK004750:5596..8073 +
NSK004750tmRNANSK004750t:5596..8073 +
NSK004751geneNSK004751:8058..8388 -
NSK004751tmRNANSK004751t:8058..8388 -
NSK004752geneNSK004752:8411..8646 +
NSK004752tmRNANSK004752t:8411..8646 +
NSK004753geneNSK004753:8655..9143 +
NSK004753tmRNANSK004753t:8655..9143 +
NSK004754geneNSK004754:9338..10294 -
NSK004754tmRNANSK004754t:9338..10294 -
NSK004755geneNSK004755:10615..16360 -
NSK004755tmRNANSK004755t:10615..16360 -
NSK004756geneNSK004756:17262..18439 -
NSK004756tmRNANSK004756t:17262..18439 -
NSK004757geneNSK004757:20512..21845 +
NSK004757tmRNANSK004757t:20512..21845 +
NSK004758geneNSK004758:22689..24890 -
NSK004758tmRNANSK004758t:22689..24890 -
NSK004759geneNSK004759:25548..27427 +
NSK004759tmRNANSK004759t:25548..27427 +
NSK004760geneNSK004760:28132..33363 -
NSK004760tmRNANSK004760t:28132..33363 -
NSK004761geneNSK004761:35515..39136 +
NSK004761tmRNANSK004761t:35515..39136 +
NSK004762geneNSK004762:40716..42293 +
NSK004762tmRNANSK004762t:40716..42293 +
NSK004763geneNSK004763:43312..45372 +
NSK004763tmRNANSK004763t:43312..45372 +
NSK004764geneNSK004764:45589..46712 -
NSK004764tmRNANSK004764t:45589..46712 -
NSK004765geneNSK004765:47163..50427 -
NSK004765tmRNANSK004765t:47163..50427 -
NSK004766geneNSK004766:50842..51294 +
NSK004766tmRNANSK004766t:50842..51294 +
NSK004767geneNSK004767:51962..59272 -
NSK004767tmRNANSK004767t:51962..59272 -
NSK004768geneNSK004768:60088..64912 +
NSK004768tmRNANSK004768t:60088..64912 +
NSK004769geneNSK004769:65461..67852 -
NSK004769tmRNANSK004769t:65461..67852 -
NSK004770geneNSK004770:68662..68917 -
NSK004770tmRNANSK004770t:68662..68917 -
NSK004771geneNSK004771:69921..72889 +
NSK004771tmRNANSK004771t:69921..72889 +
NSK004772geneNSK004772:73559..79799 -
NSK004772tmRNANSK004772t:73559..79799 -
NSK004773geneNSK004773:80083..81306 +
NSK004773tmRNANSK004773t:80083..81306 +
NSK004774geneNSK004774:81664..82899 -
NSK004774tmRNANSK004774t:81664..82899 -
NSK004775geneNSK004775:83363..84867 +
NSK004775tmRNANSK004775t:83363..84867 +
NSK004776geneNSK004776:85101..85439 -
NSK004776tmRNANSK004776t:85101..85439 -
NSK004777geneNSK004777:85532..87322 +
NSK004777tmRNANSK004777t:85532..87322 +
NSK004778geneNSK004778:86465..86901 -
NSK004778tmRNANSK004778t:86465..86901 -
NSK004779geneNSK004779:88762..90708 +
NSK004779tmRNANSK004779t:88762..90708 +
NSK004780geneNSK004780:91188..92365 -
NSK004780tmRNANSK004780t:91188..92365 -
NSK004781geneNSK004781:93188..96169 -
NSK004781tmRNANSK004781t:93188..96169 -
NSK004782geneNSK004782:97455..98756 +
NSK004782tmRNANSK004782t:97455..98756 +
NSK004783geneNSK004783:99056..102160 -
NSK004783tmRNANSK004783t:99056..102160 -
NSK004784geneNSK004784:102497..102784 -
NSK004784tmRNANSK004784t:102497..102784 -
NSK004785geneNSK004785:103298..105215 -
NSK004785tmRNANSK004785t:103298..105215 -
NSK004786geneNSK004786:105304..105680 +
NSK004786tmRNANSK004786t:105304..105680 +
NSK004787geneNSK004787:106220..106729 +
NSK004787tmRNANSK004787t:106220..106729 +
NSK004788geneNSK004788:106972..108961 -
NSK004788tmRNANSK004788t:106972..108961 -
NSK004789geneNSK004789:109882..110412 -
NSK004789tmRNANSK004789t:109882..110412 -
NSK004790geneNSK004790:110294..112393 -
NSK004790tmRNANSK004790t:110294..112393 -
NSK004791geneNSK004791:112431..112926 +
NSK004791tmRNANSK004791t:112431..112926 +
NSK004792geneNSK004792:113104..120422 +
NSK004792tmRNANSK004792t:113104..120422 +
NSK004793geneNSK004793:120520..120827 +
NSK004793tmRNANSK004793t:120520..120827 +
NSK004794geneNSK004794:120994..121571 -
NSK004794tmRNANSK004794t:120994..121571 -
NSK004795geneNSK004795:122171..122617 -
NSK004795tmRNANSK004795t:122171..122617 -
NSK004796geneNSK004796:124297..124955 -
NSK004796tmRNANSK004796t:124297..124955 -
NSK004797geneNSK004797:125566..126228 +
NSK004797tmRNANSK004797t:125566..126228 +
NSK004798geneNSK004798:126520..130530 -
NSK004798tmRNANSK004798t:126520..130530 -
NSK004799geneNSK004799:131560..132276 -
NSK004799tmRNANSK004799t:131560..132276 -
NSK004800geneNSK004800:132565..133219 +
NSK004800tmRNANSK004800t:132565..133219 +
NSK004801geneNSK004801:133538..135784 -
NSK004801tmRNANSK004801t:133538..135784 -
NSK004802geneNSK004802:136388..137384 -
NSK004802tmRNANSK004802t:136388..137384 -
NSK004803geneNSK004803:137929..139269 +
NSK004803tmRNANSK004803t:137929..139269 +
NSK004804geneNSK004804:140272..141834 -
NSK004804tmRNANSK004804t:140272..141834 -
NSK004805geneNSK004805:142433..144079 -
NSK004805tmRNANSK004805t:142433..144079 -
NSK004806geneNSK004806:144121..148212 +
NSK004806tmRNANSK004806t:144121..148212 +
NSK004807geneNSK004807:148280..153111 +
NSK004807tmRNANSK004807t:148280..153111 +
NSK004808geneNSK004808:153634..156306 -
NSK004808tmRNANSK004808t:153634..156306 -
NSK004809geneNSK004809:156817..158680 +
NSK004809tmRNANSK004809t:156817..158680 +
NSK004810geneNSK004810:159403..160960 +
NSK004810tmRNANSK004810t:159403..160960 +
NSK004811geneNSK004811:161054..161754 -
NSK004811tmRNANSK004811t:161054..161754 -
NSK004812geneNSK004812:161755..162763 +
NSK004812tmRNANSK004812t:161755..162763 +
NSK004813geneNSK004813:163252..165946 +
NSK004813tmRNANSK004813t:163252..165946 +
NSK004814geneNSK004814:166440..167879 -
NSK004814tmRNANSK004814t:166440..167879 -
NSK004815geneNSK004815:168165..170624 +
NSK004815tmRNANSK004815t:168165..170624 +
NSK004816geneNSK004816:170770..172971 -
NSK004816tmRNANSK004816t:170770..172971 -
NSK004817geneNSK004817:173362..174657 -
NSK004817tmRNANSK004817t:173362..174657 -
NSK004818geneNSK004818:175022..177152 +
NSK004818tmRNANSK004818t:175022..177152 +
NSK004819geneNSK004819:178583..180142 +
NSK004819tmRNANSK004819t:178583..180142 +
NSK004820geneNSK004820:180335..183464 -
NSK004820tmRNANSK004820t:180335..183464 -
NSK004821geneNSK004821:183642..184730 +
NSK004821tmRNANSK004821t:183642..184730 +
NSK004822geneNSK004822:185159..186790 -
NSK004822tmRNANSK004822t:185159..186790 -
NSK004823geneNSK004823:187452..189319 +
NSK004823tmRNANSK004823t:187452..189319 +
NSK004824geneNSK004824:190083..191577 +
NSK004824tmRNANSK004824t:190083..191577 +
NSK004825geneNSK004825:192321..195305 -
NSK004825tmRNANSK004825t:192321..195305 -
NSK004826geneNSK004826:196191..198533 -
NSK004826tmRNANSK004826t:196191..198533 -
NSK004827geneNSK004827:199192..202584 +
NSK004827tmRNANSK004827t:199192..202584 +
NSK004828geneNSK004828:202702..204384 -
NSK004828tmRNANSK004828t:202702..204384 -
NSK004829geneNSK004829:204932..206173 +
NSK004829tmRNANSK004829t:204932..206173 +
NSK004830geneNSK004830:206630..208436 -
NSK004830tmRNANSK004830t:206630..208436 -
NSK004831geneNSK004831:208919..210438 +
NSK004831tmRNANSK004831t:208919..210438 +
NSK004832geneNSK004832:211276..212625 +
NSK004832tmRNANSK004832t:211276..212625 +
NSK004833geneNSK004833:213332..214887 +
NSK004833tmRNANSK004833t:213332..214887 +
NSK004834geneNSK004834:215478..217028 +
NSK004834tmRNANSK004834t:215478..217028 +
NSK004835geneNSK004835:217911..220185 +
NSK004835tmRNANSK004835t:217911..220185 +
NSK004836geneNSK004836:220856..222583 +
NSK004836tmRNANSK004836t:220856..222583 +
NSK004837geneNSK004837:222737..223912 -
NSK004837tmRNANSK004837t:222737..223912 -
NSK004838geneNSK004838:224888..226705 +
NSK004838tmRNANSK004838t:224888..226705 +
NSK004839geneNSK004839:226831..228461 -
NSK004839tmRNANSK004839t:226831..228461 -
NSK004840geneNSK004840:228734..229777 +
NSK004840tmRNANSK004840t:228734..229777 +
NSK004841geneNSK004841:230212..231139 -
NSK004841tmRNANSK004841t:230212..231139 -
NSK004842geneNSK004842:231570..232228 +
NSK004842tmRNANSK004842t:231570..232228 +
NSK004843geneNSK004843:233804..234011 -
NSK004843tmRNANSK004843t:233804..234011 -
NSK004844geneNSK004844:233953..237033 +
NSK004844tmRNANSK004844t:233953..237033 +
NSK004845geneNSK004845:237766..239653 +
NSK004845tmRNANSK004845t:237766..239653 +
NSK004846geneNSK004846:240057..241622 -
NSK004846tmRNANSK004846t:240057..241622 -
NSK004847geneNSK004847:241669..242756 +
NSK004847tmRNANSK004847t:241669..242756 +
NSK004848geneNSK004848:243010..243824 -
NSK004848tmRNANSK004848t:243010..243824 -
NSK004849geneNSK004849:244566..248975 +
NSK004849tmRNANSK004849t:244566..248975 +
NSK004850geneNSK004850:249084..250304 -
NSK004850tmRNANSK004850t:249084..250304 -
NSK004851geneNSK004851:250853..252276 -
NSK004851tmRNANSK004851t:250853..252276 -
NSK004852geneNSK004852:252679..252953 +
NSK004852tmRNANSK004852t:252679..252953 +
NSK004853geneNSK004853:253130..254196 +
NSK004853tmRNANSK004853t:253130..254196 +
NSK004854geneNSK004854:254423..254848 +
NSK004854tmRNANSK004854t:254423..254848 +
NSK004855geneNSK004855:255141..256958 +
NSK004855tmRNANSK004855t:255141..256958 +
NSK004856geneNSK004856:257213..257766 -
NSK004856tmRNANSK004856t:257213..257766 -
nonsR041syntenic_regionnonsR041:148281..256958 +
nonsR042syntenic_regionnonsR042:190084..208436 -
nonsR158syntenic_regionnonsR158:1504..183464 +
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Genome assembly for N. salina CCMP1776 (version 2)2019-10-08
Annotated Terms
Homology
Relationships
Sequences
Synonyms
Publications