jgi.p|Nanoce1779_2|673595, mRNA_8654-protein (polypeptide) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|673595
Unique NamemRNA_8654-protein
Typepolypeptide
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length2260
Alignment locationscaffold_27:73567..82532 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_27supercontigscaffold_27:73567..82532 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This polypeptide derives from the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673595gene_8654Nannochloropsis oceanica (N. oceanica CCMP1779)gene


This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673595mRNA_8654Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>mRNA_8654-protein ID=mRNA_8654-protein|Name=jgi.p|Nanoce1779_2|673595|organism=Nannochloropsis oceanica|type=polypeptide|length=2260bp
MSSSPPQSPPLPSLMSRKEEDDRGDGGAAAAGGSSDQNVPGMRAHGTAMR
RTSTIIANDDSTNSADSDSTNSSILSSIITIQRNDDDGSSSILQAGTSPS
PATAAAARPSAAATRRGKKLPSSRIASETTAAAVTAAGGAAGGAGGGGNL
PLLHPLRLPAILLLDSIVWDAGTLVLVLFNAVCLAFYRPALINTSTLAQI
ILMCEIFCQICFTNELFVKLLALGVVKFKNSYFRDPWNVFDFLVLVAGWL
ALYATLFSSSSLPSSSSIHGPLMVFGVLRVLRPFRLLNLLPELKRLSGAV
VLALPSLTTLMSLAFLVFLALSLVGMQLLQGKFNQECYMPIGGYWESSNA
IMSRSSRSSSSGSDGDVWLKGAGAGAAVGADGRGEKSMLLCSMTGGKGGG
RACPAGGWECKDGREVGRVGPNGGWTSFDNVWVSLLTIFQCMTREGWSDV
MYWARQSGGGLMVYVFFILILLLSFFLFQLIVVFVIVNYAKSQSQGEKVT
GGQGGRDGGVAKVPAVSDRKEGARKKGVVLPLMGEEGSEGGKEGGKEGGI
LQTKLDTKNGDFSELLISKLLAIKAGARLEALTSLPPSLPPSFPPASSFS
SSVPKEGGVNVRVGEISLLLQRALRHLQLAPQHSLPPSYFRLRRNGEEDG
EEEGEEDEEGEAGPLMRTGKGGRKKREVDPSKVSYEESPGTYICAAIARS
QSFYYFGHFITLLSALLLSLAHYGMSPILNKTLTTMNNFLVFVFCLEVLI
KVRGWGWRRYKDDVGGAGVDLLVVVVSLLELFLGGTSSRSYALRCVRLVR
LFGLGRDLDMGFRKAMDNVVYTASISLPFLLLLGTFLCVFAIGGMTFLGG
KLMESDSLTGLPVPARMNFDSFYWSVISVFQIMTLDDWNKKMYMAMTVTD
SALAVGYYVSAVLIGKYGLLNLLTAILVYNYGLLQEEEEEEEGKEKEREG
KEGRMVVVKKEEKEEGRELLPPMWVYVWQRLPFRKCFSTGKSSGSSSSNN
SGSSSTSTSSSSSRGRSGSASGKHAPPPPSSSSFPPSGAGAAPSQLSLLR
EKDESEDEDEDEGEGEDRAQVIASSKRQSGTVLALCYRCICPSSSCASSF
FPRSLNCLDAACFQVYNHRSFPSLMVGAVVFSCVVLAFDGPGASGMGPSH
TWRVLTHSCEAVFFGLLLFEQIYLCRSLGGAWTYSNSYLTHPSHFINLLL
LLSTLLPLLFRSLPPVFFVIRGLRPLTLIPRLNGLQIVVYTLSLALHACG
GVLALLAVLYLLFAILGVSLFSGGFYSCNDPQRTCIPPASSSTTTAAAAA
AAAGSATATSGGSLTPHPLPTTALSGEGLRERAAPGGPFHCPSNLACVGK
FYDPYTASMLERKWQNPSFSPQGSTYSFDSVPAALLTLFEVANLEGWANI
MFSAVDVVGQGRGSERNANPGAAVYFVSFLFVVCFFVQEIFVAVIVDHFK
RLKTVLNGSAFMTEEQKEWVRLQKTIKKRHPRIHSPPSQDRAPIRARVYA
LVKSSFFEPSVTAVVAVNVLLMLAAPSSFPSSISPNFHRHVDTIFTYIYS
SELLLRLYALGPYAYFFPALSSPVPPSISFLPPSRPWNLYDCGIAVWGIL
YLAVGEVGRECASCLLLLRLGRTLRIFRLVRHSEHLRRLCRTLYLALPSL
KNIGMFLLLIYYIYAIGGMHLFSTLPFGTYINADANFTSFSLAFLLLLRC
TAGENWNGLMHEADQAERGRVRVAVFYFCSFMIMISYVVLNLFIATMLEH
FQDMEGGKEGKRLVCSRDIRIFSRLWTEAKKRSLRGDLTKIDNRASTTVT
AVMAVKRRKEGGDGGASSMVVAAVRKMRKKGTAAGESSSSNSSNSSSNSS
NNNNNVLIASPSLLLPHSPTPTTPSTDDTGLTAVATPSSLPSSTSPGTSS
QPQLQQQQQQQQQQPSSSPSSSLPLSPLLPSQVAGSSSSSGTGSSGVCGD
ADWPATLSLRRSQQQQQQQQQQQQQQEQMQEQARTPSSPSSSPPTSRHIS
ISLSHSSPAHELLQQQQRQSASNQAMSTSSSSSSSTSTTGTSIPNAEEKT
REDMDGEQEEQVQEQEEEDEDEEEDAEEKDEDEDEDEDEDEEEEEIHGMK
EEDVEAEMLALQQLGEEFLSSTCTSTTRSRPRLRSTLPSSFSASVGRGGG
LGERGEGGREGSRRSSMAMVEDGDVDLALIEQELLSSFSRQHQQHQQQDA
VLSQEEEEMVGRRTFTSGAGVAQAPSVVLRSSATPFSSSLLSGRGQMEEK
REAGEDGQH*
back to top
Synonyms
Publications