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Properties
| Property Name | Value |
|---|
| Product | Ammonium transporter AmtB-like protein |
| Orig transcript id | gnl|cribi|Naga_100551g3.4021.mrna |
| Orig protein id | gnl|cribi|Naga_100551g3.4021 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037259.1 | supercontig | KK037259.1:84114..85764 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9995 ID=rna9995|Name=rna9995|organism=Nannochloropsis gaditana|type=mRNA|length=1556bp
ATGGGTAAGAAAGATGGCTTGACTAACCTCCTCCCTCCTTTCCAAACCCC
AAATATACAGGGGCCACAACATATCAAACAACGATCTGCACATGTCGCAC
AATGAAAAAGACAATTCGTTCAATCACATTCCCAATCCATCGCCCACCAA
GCACATTGAATGCCGGCGCCAGCACTCGCAAGTCGAGCAATGACAGCAGT
GACGGCAGCGGTAGCATCAGTCCTGTCCCCCAACACAGCCACCATCCTTC
TACTCTGAAGAGAGCAAGACCGCAACAGCATTACGAAAAAGGGCAACGTC
TAACGGCTAACGAGGCAATGGCGTCATTACCACCATTCCAAGACTCTGTC
ACGTCCCAACCGACGCGCTCACAACAAGGCGAAAAGAATACCTCCCCACT
CCCCCCTCGGGCGCCCTCCCTCACAATCCACGTCCAAGAATGTCTCGATG
AAGCCTTCGGATTGTATGTATGGCCGTCGTCCGTAAAACTAGCCTCGTAT
CTGTACCATCTGTTTGAGAGATACCCGGACTTTTTCCGAGGCAAGCGAGT
GATCGAGCTGGGCGCTGGGTGAGCATGGCAGAGGAGGGAACGGCGGAACT
TCGGGAGGGAGGGCGTTACGTTGACAGGCAGCAAGTAGAAAGAGAGGGGG
CAAGGGAAGACAAGGTAGCAAGAGCTATCTTGTAGGCCCTGACCCAAGGC
AATCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCCTCCTCCCTCCC
TCCCTCCCTTCCCTCCTCCCTCCCTTCCTCCCTCCCTACCTCCCCTTCGC
CAGGACTGCCCTCCCAAGCCTCTTGTGCGCCCATCCCCGACTGGGAGCGG
CGCATGTGCGGGTGACGGACCGGGCAGATGCCAGGGCAGTGCTGGAGAAC
GCAAGGGAGTCCTGTCGATTGAACAAGTACGGTGAAGGAGGGGGAGAGGG
AGGCGGGAGGCCCAGAAGGAGAGGAGGAGGTGGAGGGGGAAAAGAGTGGG
GTAAGGAAGACGATGACAGGGTGGGGCGCAGTGAAGGAGAGGCAGGAAGG
GAAGAGGGGCGGGTGCGGGTGGAGGGGTGGACCTGGGGTAGCTGGAGCAG
AGTCCTCGAGGGCGAGGGGGAGGGCGGGGGGGAGGGCGGGGAAGAGGCCA
GGTGGGACATTGTCCTGGCGGCTGACTGCTGCTATTGTAAATCGACGACC
GAGTCCTTCCTGGCCACGGTCGTATTTCTCCTGCGGGGGGGGAAGGGCCC
GGAAGAGGGAGGGAGGGGGGCTCTCTCCCCTTCCTCCCCCTCCGTCGCTC
CCTCAATCTCGCCCTCCCCGGTGCTGTACTTGGCCTATCCAGACAGAGGG
ATGGAGGGACTGAGGGTCCTCTTCCTTCGATGGGGTCTGGCGGTGAGGGA
GGTGGAGGGCGCGGGGGGGGAAGGAGGGGAGGGAGGGGAGGAAGAAGAGG
TGGCGGGGATGGGAGGGGTGAAGATCTACATCTTGGAGGTGCGGTTGGCG
GACAGGCTTTAATTGAGCACAACGTAATTAAAAATAGAATGCAAAAATAG
GAAAGG back to topprotein sequence of rna9995 >rna9995-protein ID=rna9995-protein|Name=rna9995|organism=Nannochloropsis gaditana|type=polypeptide|length=218bp
MPPIAVACSSKNHLQTATSISPLQVPVRKMEDVHGRSGLAFPMTLVVMQG
LILVIWTMYGSYAPDAEGTAPSPSSSSYTATTLYQSWLGVHIMMLFGFGN
LMTFMHRHGYSASGYTFLVTCLGLQWCVIMYAFWHGLIGEGKLRGPTLDM
TMLFQGDFGVAAVLISFGALIGKISPTQLMVLCFLEIIVYAASEAFVSEV
LRAEDVGGSMVIHTFGSP back to topmRNA from alignment at KK037259.1:84114..85764- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9995 ID=rna9995|Name=rna9995|organism=Nannochloropsis gaditana|type=mRNA|length=1651bp|location=Sequence derived from alignment at KK037259.1:84114..85764- (Nannochloropsis gaditana)
ATGCCGCCGATCGCCGTGGCGTGCAGTAGGTAACCCGAACCCTAACCCTA
GCAGGGAGACCGTGCCAAAAAAGTCGAGCCGTTAAAAGGTGGAGGCCCCA
GGCCGGCGGGGTTTCGGACGTGCCGGGAGGTTGGATCCTATGCTGCAAAA
GGTCATGCACGCAACTCTGGCGTCCTGGCGCGCCCCCGACGTGTCCCGTT
GCGTATCATAAGGGCCCAGTTTGGAAGAGACGCGGGAAAGGAATTGATTT
TGGCGCCAGCGATAGAGACAGGAGAGCGGAATACGAACATCTGGATTTCC
GTCCTCAAAATGCCGCTCCATCTTCTTGTTGTACAAAACTATCAACTTCG
CCCGCAACTTCTTCAAAAAAAGGCCAAATTGGTCGATTTTTTTATCTTTT
GACATACGAAATTTCTTCTCACCCACGCGTAATCGGTTTTTACAGTAAAA
ATCACCTGCAAACTGCAACTTCCATTTCCCCGCTTCAAGTTCCCGTGAGA
AAGATGGAAGACGTGCATGGACGAAGCGGCTTGGCCTTTCCCATGACCCT
CGTTGTAATGCAAGGGCTCATTCTTGTCATCTGGACCATGTACGGCTCCT
ACGCCCCCGGTACGTACATTTTTCATCCCTCGCTCTCGTCATCCAGTTGA
TCGGTTCACACAGTGCTGGGGGTCACCCATGTCGCGCGAGTTCCCGCCCA
TAGCTTGACGTCTCCAGCCATGTCCGTCGCCGACCTGTTCCTCAATAACT
TTTTCATCTTTTTGGCTATCTTCCTTTTAACCCCAGATGCCGAAGGTACT
GCGCCCTCCCCGTCCTCCTCCTCCTACACTGCTACTACCCTCTATCAGTC
CTGGCTCGGTGTGCACATCATGATGCTTTTCGGCTTTGGAAACCTCATGA
CCTTTATGCATCGACATGGCTACTCAGCCAGCGGGTATACCTTCCTCGTC
ACCTGCCTCGGTGCGGCTCCCCTGCCTCCCTCCTCCCTCCCTCCCTCTCC
CCCTCCCTCCCTCCCCCCCTCCCTTTTCCCTCCACCTCTCGCAGAGTCTC
CTCCAAGAGAAAAGCCATGGGAACGACAGAGTCTTCCTCACTCACCCACT
TCCCCATCTTTCCCATTAGGGCTTCAATGGTGCGTCATCATGTACGCTTT
CTGGCACGGCTTGATCGGCGAGGGGAAGCTTCGCGGTCCTACCTTGGACA
TGACCATGCTCTTCCAGGGGGACTTTGGGGTGGCCGCCGTCTTGATCTCC
TTCGGCGCCCTCATTGGCAAGGTGCAGGACGGTCTATTCCCTCCCTCCCT
CCCTCCCTCTCTCCCTCCCTCCCTCCCTCCCTCCCCCGCTCACTGGAGCC
CTCGCCCCCCCCCGTGGCTCCTCTGCGGTCCGATCCTTTAATCCTCCACC
GGCGTTACCAACCCTGCCTCCCTCGTTCCCGTTCACAGATCTCTCCCACC
CAGCTCATGGTTCTTTGTTTCCTGGAGATCATCGTCTACGCGGCCTCGGA
AGCCTTCGTGAGCGAGGTCCTGCGGGCGGAGGACGTGGGGGGGTCCATGG
TCATCCACACCTTCGGTAAGCCGCCGGGGACCCGACGGGTGCCTAACCGT
GCCCTAGCGGACATTGTCGGGGTTTATTCGCTACGGGCAGGCTCCCCTTG
A back to topCoding sequence (CDS) from alignment at KK037259.1:84114..85764- >rna9995 ID=rna9995|Name=rna9995|organism=Nannochloropsis gaditana|type=CDS|length=3942bp|location=Sequence derived from alignment at KK037259.1:84114..85764- (Nannochloropsis gaditana)
GCTCCCCTTGAATCTCTCCCACCCAGCTCATGGTTCTTTGTTTCCTGGAG
ATCATCGTCTACGCGGCCTCGGAAGCCTTCGTGAGCGAGGTCCTGCGGGC
GGAGGACGTGGGGGGGTCCATGGTCATCCACACCTTCGGGCTTCAATGGT
GCGTCATCATGTACGCTTTCTGGCACGGCTTGATCGGCGAGGGGAAGCTT
CGCGGTCCTACCTTGGACATGACCATGCTCTTCCAGGGGGACTTTGGGGT
GGCCGCCGTCTTGATCTCCTTCGGCGCCCTCATTGGCAAGATGCCGAAGG
TACTGCGCCCTCCCCGTCCTCCTCCTCCTACACTGCTACTACCCTCTATC
AGTCCTGGCTCGGTGTGCACATCATGATGCTTTTCGGCTTTGGAAACCTC
ATGACCTTTATGCATCGACATGGCTACTCAGCCAGCGGGTATACCTTCCT
CGTCACCTGCCTCGTAAAAATCACCTGCAAACTGCAACTTCCATTTCCCC
GCTTCAAGTTCCCGTGAGAAAGATGGAAGACGTGCATGGACGAAGCGGCT
TGGCCTTTCCCATGACCCTCGTTGTAATGCAAGGGCTCATTCTTGTCATC
TGGACCATGTACGGCTCCTACGCCCCCGATGCCGCCGATCGCCGTGGCGT
GCAGTAGGCTCCCCTTGAATCTCTCCCACCCAGCTCATGGTTCTTTGTTT
CCTGGAGATCATCGTCTACGCGGCCTCGGAAGCCTTCGTGAGCGAGGTCC
TGCGGGCGGAGGACGTGGGGGGGTCCATGGTCATCCACACCTTCGGGCTT
CAATGGTGCGTCATCATGTACGCTTTCTGGCACGGCTTGATCGGCGAGGG
GAAGCTTCGCGGTCCTACCTTGGACATGACCATGCTCTTCCAGGGGGACT
TTGGGGTGGCCGCCGTCTTGATCTCCTTCGGCGCCCTCATTGGCAAGATG
CCGAAGGTACTGCGCCCTCCCCGTCCTCCTCCTCCTACACTGCTACTACC
CTCTATCAGTCCTGGCTCGGTGTGCACATCATGATGCTTTTCGGCTTTGG
AAACCTCATGACCTTTATGCATCGACATGGCTACTCAGCCAGCGGGTATA
CCTTCCTCGTCACCTGCCTCGTAAAAATCACCTGCAAACTGCAACTTCCA
TTTCCCCGCTTCAAGTTCCCGTGAGAAAGATGGAAGACGTGCATGGACGA
AGCGGCTTGGCCTTTCCCATGACCCTCGTTGTAATGCAAGGGCTCATTCT
TGTCATCTGGACCATGTACGGCTCCTACGCCCCCGATGCCGCCGATCGCC
GTGGCGTGCAGTAGGCTCCCCTTGAATCTCTCCCACCCAGCTCATGGTTC
TTTGTTTCCTGGAGATCATCGTCTACGCGGCCTCGGAAGCCTTCGTGAGC
GAGGTCCTGCGGGCGGAGGACGTGGGGGGGTCCATGGTCATCCACACCTT
CGGGCTTCAATGGTGCGTCATCATGTACGCTTTCTGGCACGGCTTGATCG
GCGAGGGGAAGCTTCGCGGTCCTACCTTGGACATGACCATGCTCTTCCAG
GGGGACTTTGGGGTGGCCGCCGTCTTGATCTCCTTCGGCGCCCTCATTGG
CAAGATGCCGAAGGTACTGCGCCCTCCCCGTCCTCCTCCTCCTACACTGC
TACTACCCTCTATCAGTCCTGGCTCGGTGTGCACATCATGATGCTTTTCG
GCTTTGGAAACCTCATGACCTTTATGCATCGACATGGCTACTCAGCCAGC
GGGTATACCTTCCTCGTCACCTGCCTCGTAAAAATCACCTGCAAACTGCA
ACTTCCATTTCCCCGCTTCAAGTTCCCGTGAGAAAGATGGAAGACGTGCA
TGGACGAAGCGGCTTGGCCTTTCCCATGACCCTCGTTGTAATGCAAGGGC
TCATTCTTGTCATCTGGACCATGTACGGCTCCTACGCCCCCGATGCCGCC
GATCGCCGTGGCGTGCAGTAGGCTCCCCTTGAATCTCTCCCACCCAGCTC
ATGGTTCTTTGTTTCCTGGAGATCATCGTCTACGCGGCCTCGGAAGCCTT
CGTGAGCGAGGTCCTGCGGGCGGAGGACGTGGGGGGGTCCATGGTCATCC
ACACCTTCGGGCTTCAATGGTGCGTCATCATGTACGCTTTCTGGCACGGC
TTGATCGGCGAGGGGAAGCTTCGCGGTCCTACCTTGGACATGACCATGCT
CTTCCAGGGGGACTTTGGGGTGGCCGCCGTCTTGATCTCCTTCGGCGCCC
TCATTGGCAAGATGCCGAAGGTACTGCGCCCTCCCCGTCCTCCTCCTCCT
ACACTGCTACTACCCTCTATCAGTCCTGGCTCGGTGTGCACATCATGATG
CTTTTCGGCTTTGGAAACCTCATGACCTTTATGCATCGACATGGCTACTC
AGCCAGCGGGTATACCTTCCTCGTCACCTGCCTCGTAAAAATCACCTGCA
AACTGCAACTTCCATTTCCCCGCTTCAAGTTCCCGTGAGAAAGATGGAAG
ACGTGCATGGACGAAGCGGCTTGGCCTTTCCCATGACCCTCGTTGTAATG
CAAGGGCTCATTCTTGTCATCTGGACCATGTACGGCTCCTACGCCCCCGA
TGCCGCCGATCGCCGTGGCGTGCAGTAGGCTCCCCTTGAATCTCTCCCAC
CCAGCTCATGGTTCTTTGTTTCCTGGAGATCATCGTCTACGCGGCCTCGG
AAGCCTTCGTGAGCGAGGTCCTGCGGGCGGAGGACGTGGGGGGGTCCATG
GTCATCCACACCTTCGGGCTTCAATGGTGCGTCATCATGTACGCTTTCTG
GCACGGCTTGATCGGCGAGGGGAAGCTTCGCGGTCCTACCTTGGACATGA
CCATGCTCTTCCAGGGGGACTTTGGGGTGGCCGCCGTCTTGATCTCCTTC
GGCGCCCTCATTGGCAAGATGCCGAAGGTACTGCGCCCTCCCCGTCCTCC
TCCTCCTACACTGCTACTACCCTCTATCAGTCCTGGCTCGGTGTGCACAT
CATGATGCTTTTCGGCTTTGGAAACCTCATGACCTTTATGCATCGACATG
GCTACTCAGCCAGCGGGTATACCTTCCTCGTCACCTGCCTCGTAAAAATC
ACCTGCAAACTGCAACTTCCATTTCCCCGCTTCAAGTTCCCGTGAGAAAG
ATGGAAGACGTGCATGGACGAAGCGGCTTGGCCTTTCCCATGACCCTCGT
TGTAATGCAAGGGCTCATTCTTGTCATCTGGACCATGTACGGCTCCTACG
CCCCCGATGCCGCCGATCGCCGTGGCGTGCAGTAGGCTCCCCTTGAATCT
CTCCCACCCAGCTCATGGTTCTTTGTTTCCTGGAGATCATCGTCTACGCG
GCCTCGGAAGCCTTCGTGAGCGAGGTCCTGCGGGCGGAGGACGTGGGGGG
GTCCATGGTCATCCACACCTTCGGGCTTCAATGGTGCGTCATCATGTACG
CTTTCTGGCACGGCTTGATCGGCGAGGGGAAGCTTCGCGGTCCTACCTTG
GACATGACCATGCTCTTCCAGGGGGACTTTGGGGTGGCCGCCGTCTTGAT
CTCCTTCGGCGCCCTCATTGGCAAGATGCCGAAGGTACTGCGCCCTCCCC
GTCCTCCTCCTCCTACACTGCTACTACCCTCTATCAGTCCTGGCTCGGTG
TGCACATCATGATGCTTTTCGGCTTTGGAAACCTCATGACCTTTATGCAT
CGACATGGCTACTCAGCCAGCGGGTATACCTTCCTCGTCACCTGCCTCGT
AAAAATCACCTGCAAACTGCAACTTCCATTTCCCCGCTTCAAGTTCCCGT
GAGAAAGATGGAAGACGTGCATGGACGAAGCGGCTTGGCCTTTCCCATGA
CCCTCGTTGTAATGCAAGGGCTCATTCTTGTCATCTGGACCATGTACGGC
TCCTACGCCCCCGATGCCGCCGATCGCCGTGGCGTGCAGTAG back to top
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