EWM20709.1, cds9964 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20709.1 vs. NCBI_GenBank
Match: gi|585100544|gb|EWM20709.1| (Ammonium transporter AmtB-like protein [Nannochloropsis gaditana]) HSP 1 Score: 445.662 bits (1145), Expect = 1.876e-158 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0 Query: 1 MPPIAVACSSKNHLQTATSISPLQVPVRKMEDVHGRSGLAFPMTLVVMQGLILVIWTMYGSYAPDAEGTAPSPSSSSYTATTLYQSWLGVHIMMLFGFGNLMTFMHRHGYSASGYTFLVTCLGLQWCVIMYAFWHGLIGEGKLRGPTLDMTMLFQGDFGVAAVLISFGALIGKISPTQLMVLCFLEIIVYAASEAFVSEVLRAEDVGGSMVIHTFGSP 218 MPPIAVACSSKNHLQTATSISPLQVPVRKMEDVHGRSGLAFPMTLVVMQGLILVIWTMYGSYAPDAEGTAPSPSSSSYTATTLYQSWLGVHIMMLFGFGNLMTFMHRHGYSASGYTFLVTCLGLQWCVIMYAFWHGLIGEGKLRGPTLDMTMLFQGDFGVAAVLISFGALIGKISPTQLMVLCFLEIIVYAASEAFVSEVLRAEDVGGSMVIHTFGSP Sbjct: 1 MPPIAVACSSKNHLQTATSISPLQVPVRKMEDVHGRSGLAFPMTLVVMQGLILVIWTMYGSYAPDAEGTAPSPSSSSYTATTLYQSWLGVHIMMLFGFGNLMTFMHRHGYSASGYTFLVTCLGLQWCVIMYAFWHGLIGEGKLRGPTLDMTMLFQGDFGVAAVLISFGALIGKISPTQLMVLCFLEIIVYAASEAFVSEVLRAEDVGGSMVIHTFGSP 218
BLAST of EWM20709.1 vs. NCBI_GenBank
Match: gi|638246216|ref|NP_001279347.1| (Rh-associated glycoprotein [Callorhinchus milii] >gi|392884328|gb|AFM90996.1| RhAG-like protein [Callorhinchus milii]) HSP 1 Score: 147.902 bits (372), Expect = 1.219e-38 Identity = 73/179 (40.78%), Postives = 116/179 (64.80%), Query Frame = 0 Query: 39 LAFPMTLVVMQGLILVIWTMYGSYAPDAEGTAPSPSSSSYTATTLYQSWLGVHIMMLFGFGNLMTFMHRHGYSASGYTFLVTCLGLQWCVIMYAFWHGLIGEGKLRGPTLDMTMLFQGDFGVAAVLISFGALIGKISPTQLMVLCFLEIIVYAASEAFVSEVLRAEDVGGSMVIHTFGS 217 L F + + ++ +I+V + ++ +Y A+ P+ +++ + LY S+ VH+M+ GFG LMTF+ R+G+S+ G+ L+ GLQW +M F H L +GK++ + +T + GDF A VLI+FGA++GK SP QL++L LEI ++AA+E V EVL+A+DVG SM IH FG+ Sbjct: 11 LKFSLLAIALEVVIIVQYALFATYETAADSRKPNGTTTDFD--RLYPSFQDVHVMIFVGFGFLMTFLKRYGFSSVGFNLLIAAFGLQWGALMQGFLHHL-HDGKIK---IGITSMINGDFSTATVLITFGAILGKTSPVQLLILTVLEITIFAANEFLVGEVLKAKDVGASMTIHAFGA 183
BLAST of EWM20709.1 vs. NCBI_GenBank
Match: gi|632970094|ref|XP_007901455.1| (PREDICTED: ammonium transporter Rh type A isoform X2 [Callorhinchus milii]) HSP 1 Score: 145.976 bits (367), Expect = 3.906e-38 Identity = 73/179 (40.78%), Postives = 116/179 (64.80%), Query Frame = 0 Query: 39 LAFPMTLVVMQGLILVIWTMYGSYAPDAEGTAPSPSSSSYTATTLYQSWLGVHIMMLFGFGNLMTFMHRHGYSASGYTFLVTCLGLQWCVIMYAFWHGLIGEGKLRGPTLDMTMLFQGDFGVAAVLISFGALIGKISPTQLMVLCFLEIIVYAASEAFVSEVLRAEDVGGSMVIHTFGS 217 L F + + ++ +I+V + ++ +Y A+ P+ +++ + LY S+ VH+M+ GFG LMTF+ R+G+S+ G+ L+ GLQW +M F H L +GK++ + +T + GDF A VLI+FGA++GK SP QL++L LEI ++AA+E V EVL+A+DVG SM IH FG+ Sbjct: 11 LKFSLLAIALEVVIIVQYALFVTYETAADSRKPNGTTTDFD--RLYPSFQDVHVMIFVGFGFLMTFLKRYGFSSVGFNLLIAAFGLQWGALMQGFLHHL-HDGKIK---IGITSMINGDFSTATVLITFGAILGKTSPVQLLILTVLEITIFAANEFLVGEVLKAKDVGASMTIHAFGA 183
BLAST of EWM20709.1 vs. NCBI_GenBank
Match: gi|387914340|gb|AFK10779.1| (Rhag [Callorhinchus milii]) HSP 1 Score: 146.362 bits (368), Expect = 4.542e-38 Identity = 73/179 (40.78%), Postives = 116/179 (64.80%), Query Frame = 0 Query: 39 LAFPMTLVVMQGLILVIWTMYGSYAPDAEGTAPSPSSSSYTATTLYQSWLGVHIMMLFGFGNLMTFMHRHGYSASGYTFLVTCLGLQWCVIMYAFWHGLIGEGKLRGPTLDMTMLFQGDFGVAAVLISFGALIGKISPTQLMVLCFLEIIVYAASEAFVSEVLRAEDVGGSMVIHTFGS 217 L F + + ++ +I+V + ++ +Y A+ P+ +++ + LY S+ VH+M+ GFG LMTF+ R+G+S+ G+ L+ GLQW +M F H L +GK++ + +T + GDF A VLI+FGA++GK SP QL++L LEI ++AA+E V EVL+A+DVG SM IH FG+ Sbjct: 11 LKFSLLAIALEVVIIVQYALFVTYETAADSRKPNGTTTDFD--RLYPSFQDVHVMIFVGFGFLMTFLKRYGFSSVGFNLLIAAFGLQWGALMQGFLHHL-HDGKIK---IGITSMINGDFSTATVLITFGAILGKTSPVQLLILTVLEITIFAANEFLVGEVLKAKDVGASMTIHAFGA 183
BLAST of EWM20709.1 vs. NCBI_GenBank
Match: gi|1018198555|gb|AMY50362.1| (glycoprotein [Acipenser schrenckii]) HSP 1 Score: 137.117 bits (344), Expect = 1.106e-34 Identity = 71/180 (39.44%), Postives = 112/180 (62.22%), Query Frame = 0 Query: 41 FPMTLVVMQGLILVIWTMYGSYAPDAEGTAPSPSSSSYTA---TTLYQSWLGVHIMMLFGFGNLMTFMHRHGYSASGYTFLVTCLGLQWCVIMYAFWHGLIGEGKLRGPTLDMTMLFQGDFGVAAVLISFGALIGKISPTQLMVLCFLEIIVYAASEAFVSEVLRAEDVGGSMVIHTFGS 217 FP+ + ++ LI+V++ ++ SY + S+ + T+ + LY + VH+M+ GFG LMTF+ ++ +S+ G L+ LGLQW +++ FWH + GK+ +D+ + DF A VLISFGA++GK SP QL+++ LEI V+A +E V+EVL A DVG SM+IH FG+ Sbjct: 13 FPILALFLEILIIVLFGVFVSYKDSSHDDHKQASNDTITSVRFSQLYPMFQDVHVMIFIGFGFLMTFLKKYSFSSVGINMLLAALGLQWGILVQGFWH--LHHGKIE---IDILKMINADFSTATVLISFGAVLGKTSPVQLLIMTILEITVFAMNEHLVAEVLGANDVGASMIIHAFGA 187
BLAST of EWM20709.1 vs. NCBI_GenBank
Match: gi|695410678|ref|XP_009525262.1| (hypothetical protein PHYSODRAFT_494867 [Phytophthora sojae] >gi|348682729|gb|EGZ22545.1| hypothetical protein PHYSODRAFT_494867 [Phytophthora sojae]) HSP 1 Score: 136.732 bits (343), Expect = 2.725e-34 Identity = 77/177 (43.50%), Postives = 104/177 (58.76%), Query Frame = 0 Query: 41 FPMTLVVMQGLILVIWTMYGSYAPDAEGTAPSPSSSSYTATTLYQSWLGVHIMMLFGFGNLMTFMHRHGYSASGYTFLVTCLGLQWCVIMYAFWHGLIGEGKLRGPTLDMTMLFQGDFGVAAVLISFGALIGKISPTQLMVLCFLEIIVYAASEAFVSEVLRAEDVGGSMVIHTFGS 217 F M+LV+ + + L+ + + A S S+ SY Y ++ VH+M+ GFG LMTF+ ++ SA G FL+ L LQW VIM H +IG+ LD+ + GDF AVLISFGA++GK +PTQL+ + FLEII YA +E V E A D GGSMVIHTFG+ Sbjct: 44 FAMSLVLFEAVCLIFFALKFEMPSPDNSDAESASTLSY-----YPFYMDVHVMIYIGFGFLMTFLRKYSMSAVGLNFLIGVLSLQWGVIMVTMAHQIIGD-DYHTKILDIPTMINGDFAAGAVLISFGAVLGKTTPTQLVWMTFLEIIFYAINEYLVYEQFLATDAGGSMVIHTFGA 214
BLAST of EWM20709.1 vs. NCBI_GenBank
Match: gi|431836474|gb|AGA93878.1| (RhAG [Porichthys notatus]) HSP 1 Score: 135.576 bits (340), Expect = 3.510e-34 Identity = 68/183 (37.16%), Postives = 113/183 (61.75%), Query Frame = 0 Query: 39 LAFPMTLVVMQGLILVIWTMYGSYAPDAEGTAPSPSSSSY----TATTLYQSWLGVHIMMLFGFGNLMTFMHRHGYSASGYTFLVTCLGLQWCVIMYAFWHGLIGEGKLRGPTLDMTMLFQGDFGVAAVLISFGALIGKISPTQLMVLCFLEIIVYAASEAFVSEVLRAEDVGGSMVIHTFGS 217 L FP+ +V++ + ++++ ++ Y D +G S+ ++ TLY + VH+M+ GFG LMTF+ ++G+S+ G L+ GLQW ++M FWH + GK++ +D+ + DF A VLISFGA++GK SP QL+++ LEI +++ +E V+ VL A DVG SM+IH +G+ Sbjct: 10 LKFPIVALVLEIITIILYAVFVDY-DDGKGHGHGHSNETHPEEQNPMTLYPMFQDVHVMIFIGFGFLMTFLKKYGFSSVGVNLLLAAFGLQWGLLMQGFWH--LDNGKIK---VDIFKIINADFSTATVLISFGAVLGKTSPVQLLIMTILEITIFSINEHLVATVLEANDVGASMIIHAYGA 186
BLAST of EWM20709.1 vs. NCBI_GenBank
Match: gi|727002654|ref|XP_010391499.1| (ammonium transporter Rh type A [Corvus cornix cornix]) HSP 1 Score: 134.42 bits (337), Expect = 1.093e-33 Identity = 71/186 (38.17%), Postives = 108/186 (58.06%), Query Frame = 0 Query: 32 DVHGRSGLAFPMTLVVMQGLILVIWTMYGSYAPDAEGTAPSPSSSSYTATTLYQSWLGVHIMMLFGFGNLMTFMHRHGYSASGYTFLVTCLGLQWCVIMYAFWHGLIGEGKLRGPTLDMTMLFQGDFGVAAVLISFGALIGKISPTQLMVLCFLEIIVYAASEAFVSEVLRAEDVGGSMVIHTFGS 217 D F + ++++ +I+V++ ++ Y TAP LY + VH+M+ GFG LMTF+ ++G+S+ G+ L+ GLQW ++M FWH + EGK+ +D+ + DF A LISFGAL+GK SP Q+++L LEI ++A +E V+EVL A DVG SM IH FG+ Sbjct: 4 DFDTNMRFKFSILALLLEAIIIVLFGIFVDY-----DTAPLHEH-------LYPYFQDVHVMIFVGFGFLMTFLKKYGFSSVGFNMLIAAFGLQWGILMQGFWH--MNEGKI---IVDIKSMINADFSTATALISFGALLGKTSPVQMLILTLLEITIFACNEHLVTEVLEATDVGASMTIHAFGA 172
BLAST of EWM20709.1 vs. NCBI_GenBank
Match: gi|676424362|gb|KFO65342.1| (Ammonium transporter Rh type A, partial [Corvus brachyrhynchos]) HSP 1 Score: 133.65 bits (335), Expect = 1.333e-33 Identity = 70/177 (39.55%), Postives = 107/177 (60.45%), Query Frame = 0 Query: 41 FPMTLVVMQGLILVIWTMYGSYAPDAEGTAPSPSSSSYTATTLYQSWLGVHIMMLFGFGNLMTFMHRHGYSASGYTFLVTCLGLQWCVIMYAFWHGLIGEGKLRGPTLDMTMLFQGDFGVAAVLISFGALIGKISPTQLMVLCFLEIIVYAASEAFVSEVLRAEDVGGSMVIHTFGS 217 F + ++++ +I+V++ ++ Y TAP LY + VH+M+ GFG LMTF+ ++G+S+ G+ L+ GLQW ++M FWH + EGK+ +D+ + DF A LISFGAL+GK SP Q+++L LEI ++A +E V+EVL A DVG SM IH FG+ Sbjct: 5 FSILALLLEAIIIVLFGIFVDY-----DTAPLHEH-------LYPYFQDVHVMIFVGFGFLMTFLKKYGFSSVGFNMLIAAFGLQWGILMQGFWH--MNEGKI---IVDIKSMINADFSTATALISFGALLGKTSPVQMLILTLLEITIFACNEHLVTEVLEATDVGASMTIHAFGA 164
BLAST of EWM20709.1 vs. NCBI_GenBank
Match: gi|1049450921|ref|XP_017600451.1| (PREDICTED: ammonium transporter Rh type A [Corvus brachyrhynchos]) HSP 1 Score: 134.035 bits (336), Expect = 1.927e-33 Identity = 71/186 (38.17%), Postives = 108/186 (58.06%), Query Frame = 0 Query: 32 DVHGRSGLAFPMTLVVMQGLILVIWTMYGSYAPDAEGTAPSPSSSSYTATTLYQSWLGVHIMMLFGFGNLMTFMHRHGYSASGYTFLVTCLGLQWCVIMYAFWHGLIGEGKLRGPTLDMTMLFQGDFGVAAVLISFGALIGKISPTQLMVLCFLEIIVYAASEAFVSEVLRAEDVGGSMVIHTFGS 217 D F + ++++ +I+V++ ++ Y TAP LY + VH+M+ GFG LMTF+ ++G+S+ G+ L+ GLQW ++M FWH + EGK+ +D+ + DF A LISFGAL+GK SP Q+++L LEI ++A +E V+EVL A DVG SM IH FG+ Sbjct: 4 DFDTNMRFKFSILALLLEAIIIVLFGIFVDY-----DTAPLHEH-------LYPYFQDVHVMIFVGFGFLMTFLKKYGFSSVGFNMLIAAFGLQWGILMQGFWH--MNEGKI---IVDIKSMINADFSTATALISFGALLGKTSPVQMLILTLLEITIFACNEHLVTEVLEATDVGASMTIHAFGA 172 The following BLAST results are available for this feature:
BLAST of EWM20709.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|