rna999, rna999 (mRNA) Nannochloropsis gaditana

Overview
Namerna999
Unique Namerna999
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1026
Alignment locationCM002456.1:931023..932058 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100112g22.5440.mrna
Orig protein idgnl|cribi|Naga_100112g22.5440
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:931023..932058 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100112g22gene962Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29657.1cds998Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna999rna999-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna999 ID=rna999|Name=rna999|organism=Nannochloropsis gaditana|type=mRNA|length=1026bp
ATGGCCAAGGTGAGAGGTCAGTTGCTTCGCGACATTGCCGCCCTTACCAC
CTTTGGAGAGGGGGCGGAGGGATACCGAGATGGAGACGAGGACAATTATG
AGGACGGAACAAACGCGCGCCTCGCGCAATATAACAATGGATGGATAAAT
GGTGGTGATGGAGGAGGTGATGGCACGTGGGTCGTGGAAGGAGAGGACGG
AAAGAGTGGCTCGGGAGCTTCCACGGGTCGTTCGAGATTGCGGATGGAGC
GAGCAATGGATTTCGTGGACGAGGATGAAAGATATCGTGGAAAGAAAGTT
TTGCGGAGGGCTTTGGTGGATGAGGATGAGGATGAGGATGAGGATGAGGA
TGAGGGAAACGGTGCTAATTCTGGGCCTGAAGGAGACGAAGACGTGAGCA
GCAGCGAGATATCTAGCCAACAGGTAAGCGAGGACGAGCATGAAAAGGAA
CCCACTTTGGAGGAGGAAATGGAAAAACTCCGGCAAAACAAAGGAGGAAT
GGCGTTGCTTTTGAAGCGCTCCAACGACGAGCAGCAGCTCAAAGCGGCGC
AAGCGCGGAAGCACCGGGACATGTGGAACAAACTTTTGGAAGTGCGCATC
CTTTTGCAGCGACTTCTAGGCATGGCAAACCGTTTTCCACGCGACAAGGC
TTACGACGAGTACTGCAGGATGGACGGAAGCGGCGAAACTCGTGCCAAGT
TCAAAGAGGTGTCAAGGGGGTTGCGAGGGTTGCTGGAGACGTTGCAACTG
CTGCGCGATTACATGCAAGCGGGGGCGGGGGGTAGGGTAGGGGGACTGGC
AGGGCTGGGCAGATCCTCCGGGAGGGCGAGCAGGAAGAAGAAAGTGGACA
CCAAGGCCTCGAAAGGGCGCAAGATCCGCTACAGCGTGCACCCGAAGCTG
GAGCATTTCATGTTCCCCGTGGACCCGCCCTGTCCCACGGACAGAAACCG
CTTGTTCGCCTCGCTGCCTGGCAGGGGGGGCAGGGCGGCGGCGGCGGCGG
AGGGGGAAGGGACCGGGGGGGGGTGA
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protein sequence of rna999

>rna999-protein ID=rna999-protein|Name=rna999|organism=Nannochloropsis gaditana|type=polypeptide|length=302bp
MKCSRKADAAVEGRTTSGSRRGRGGKGRGGGHSGGSHHHHHRGSRFKTRE
YRDGPPSDGFPLPPGQVVHDEEANLGTNFENAQSSMGAWEHQRKHFPIKL
QMWDFDQCDPNRCTGRKLARLGYIQEMKLGAPFRGLILSPEADKVVSRED
RAVVDARGVSVIDCSWARLAEIPFAKMSRGVPRLLPYLVAANSVNYGRPF
KLTCAEAVAAALHIVGLEAAAQALMSEFSWGPEFLRLNAEVLERYGRCAD
SQEVKEAEDSFLRECFEEMEVRRSEKDDLPCYYTSEEEEEEEKEEEEEKN
EE
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mRNA from alignment at CM002456.1:931023..932058-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna999 ID=rna999|Name=rna999|organism=Nannochloropsis gaditana|type=mRNA|length=1036bp|location=Sequence derived from alignment at CM002456.1:931023..932058- (Nannochloropsis gaditana)
ACAGCTAAGCGCATCCTGACTGCGGACCACGGGCCTTAATTCAGCCTTGA
AGTTTGGGAAATCACGTCACCTGCCAAGCTCCTACCACCTCCCTTTGACT
TGCCGTTCCGCTATTAGCACAAGTGCAGCATGAAATGCAGCCGAAAAGCC
GACGCTGCTGTGGAGGGAAGGACCACTTCCGGTAGCAGGCGAGGGCGCGG
TGGAAAAGGACGCGGCGGTGGTCACAGCGGGGGCAGTCACCACCACCACC
ACCGCGGTTCTCGTTTCAAGACACGGGAGTATCGGGACGGGCCGCCCTCG
GATGGCTTTCCCCTCCCCCCGGGGCAAGTCGTCCATGACGAGGAGGCGAA
TCTTGGCACGAACTTTGAAAACGCACAGAGCAGCATGGGCGCCTGGGAGC
ATCAGCGCAAGCATTTTCCCATCAAGCTCCAGATGTGGGACTTCGACCAG
TGCGACCCCAACCGCTGCACCGGACGCAAGCTCGCCCGCCTTGGCTACAT
CCAGGAAATGAAGCTCGGAGCACCGTTTCGGGGGCTTATCCTGAGCCCTG
AGGCGGACAAGGTGGTGTCGAGAGAGGACCGAGCCGTGGTGGATGCCCGG
GGCGTATCAGTGATCGATTGCTCCTGGGCGCGGCTCGCCGAAATCCCTTT
CGCCAAAATGTCCCGCGGAGTCCCCCGCCTCCTTCCCTACCTGGTGGCGG
CCAACAGCGTCAACTACGGCCGACCTTTCAAACTCACGTGCGCGGAGGCG
GTGGCGGCCGCTTTGCACATCGTCGGCTTGGAGGCGGCGGCGCAAGCGCT
CATGTCGGAGTTCTCCTGGGGACCTGAGTTTTTGCGCCTGAACGCGGAGG
TGCTGGAGAGGTATGGGAGATGCGCGGACAGCCAGGAGGTGAAGGAGGCG
GAGGATAGCTTTCTAAGGGAGTGCTTCGAGGAGATGGAGGTGCGGAGGTC
AGAGAAGGATGACCTGCCGTGCTACTATACGTCGGAAGAGGAGGAGGAGG
AGGAGAAGGAAGAGGAGGAAGAAAAGAATGAGGAGG
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Coding sequence (CDS) from alignment at CM002456.1:931023..932058-

>rna999 ID=rna999|Name=rna999|organism=Nannochloropsis gaditana|type=CDS|length=907bp|location=Sequence derived from alignment at CM002456.1:931023..932058- (Nannochloropsis gaditana)
ATGAAATGCAGCCGAAAAGCCGACGCTGCTGTGGAGGGAAGGACCACTTC
CGGTAGCAGGCGAGGGCGCGGTGGAAAAGGACGCGGCGGTGGTCACAGCG
GGGGCAGTCACCACCACCACCACCGCGGTTCTCGTTTCAAGACACGGGAG
TATCGGGACGGGCCGCCCTCGGATGGCTTTCCCCTCCCCCCGGGGCAAGT
CGTCCATGACGAGGAGGCGAATCTTGGCACGAACTTTGAAAACGCACAGA
GCAGCATGGGCGCCTGGGAGCATCAGCGCAAGCATTTTCCCATCAAGCTC
CAGATGTGGGACTTCGACCAGTGCGACCCCAACCGCTGCACCGGACGCAA
GCTCGCCCGCCTTGGCTACATCCAGGAAATGAAGCTCGGAGCACCGTTTC
GGGGGCTTATCCTGAGCCCTGAGGCGGACAAGGTGGTGTCGAGAGAGGAC
CGAGCCGTGGTGGATGCCCGGGGCGTATCAGTGATCGATTGCTCCTGGGC
GCGGCTCGCCGAAATCCCTTTCGCCAAAATGTCCCGCGGAGTCCCCCGCC
TCCTTCCCTACCTGGTGGCGGCCAACAGCGTCAACTACGGCCGACCTTTC
AAACTCACGTGCGCGGAGGCGGTGGCGGCCGCTTTGCACATCGTCGGCTT
GGAGGCGGCGGCGCAAGCGCTCATGTCGGAGTTCTCCTGGGGACCTGAGT
TTTTGCGCCTGAACGCGGAGGTGCTGGAGAGGTATGGGAGATGCGCGGAC
AGCCAGGAGGTGAAGGAGGCGGAGGATAGCTTTCTAAGGGAGTGCTTCGA
GGAGATGGAGGTGCGGAGGTCAGAGAAGGATGACCTGCCGTGCTACTATA
CGTCGGAAGAGGAGGAGGAGGAGGAGAAGGAAGAGGAGGAAGAAAAGAAT
GAGGAGG
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Synonyms
Publications