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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100385g3.2320.mrna |
| Orig protein id | gnl|cribi|Naga_100385g3.2320 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037259.1 | supercontig | KK037259.1:59459..61745 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9987 ID=rna9987|Name=rna9987|organism=Nannochloropsis gaditana|type=mRNA|length=1230bp
CCTTACTCGAGACGAAAGATTTTGGCGTAGGAACTCGCGAAATCATGTGC
TGTGTCGTGGCTAGTGGTCTCGGACGGAGGGAGGCGCGAGACACGCCACT
GTCAACAAAAAAACGGCCTGATGATTAGTACTGGCTTCCTAGGATGAATT
CCGATGCCTGTGGTGACAATTTGCCTCCTAAGCATCCTGCGTGCATCCAA
CTGCAGTGATCTTTTTGAACACGGATACCCATGCTGTCCTGAGGGGCCTT
CAGATAGCTAAGCCACCCCTCTTCTTCCCTCTTCCTCTGTATCCTGACAG
TCACACCAGTCCTTTACCTACAACCATGCGTGTCCTTGCATTCCTTGCTC
TTCTGGCCGCCCCGGCTTTCGCCTTCGTCCCCCGTATGCCCGCGCCTGTC
CGAGCCCGTGCCGGCCTCACCCTCCGCTTCTCCGGAGAGTACAGCGAGAA
GGTCCGCGCCATCGTCTTGGAGAACATGGGAGATGACGCCAAGGTCCAAG
ACTACCTGAAGGCCAACGGCGACGACACGGCCGAGTTCGCCGCCATGGGC
TTCGATTCCCTCGACTTGGTCGAGTTCTCCATGGCCGTCCAGAAGGAGTT
CGACCTGCCTGACCTGAACGAGGAAGACTTCGCTAACTTGAAGACGATCA
AAGATGTGGTCACCATGGTGGAGGCCAACAAGAAGTAAAGGGACACTTTC
CCCGACATGTCAGCGGCGGCCGAAAACTGAGAATGGGAGGGGGCCGTGCC
TCCGAGTTCAGCTTTTGGGGGCAACTGATTGTGTGACGAGTGGAAGCTTT
ACCGAACGATCCCATGGCATTCCCCTTCACTTCTGTGAGGGATTTTTTTG
CGTTTTTGACCTCCCTCATCAAGCCGACGGGGGGGGGGAAAGTCGGGAGG
AACGGCGGAAAGCGGGAGCGATGTATGTGCTATGTGTTTTTTGAGTGGTG
CTGTGAGCGGGCGGGAGTGCAGGCAGCGGAATGGTAAAATATTGGCTTTC
GGCCATCTCGTGGCATTTCTGTCGCTCTTCTGGAAGTCGAAGTGGCGTGA
TTTGCTCTGTTCCCCCTGTCCTTGATTTGTCCGTGGAAGGAAGCGTTTAA
TTCCTTAGTACCTTGTAATTGGTAGCGAGGACGAAGAACGGAAGACGAGT
TTAGGGCAAAGGGGTTACAAAGGGGATCAAAACCACAAAAGAAGAAATGT
CTCATACGGGTCCCTGCCTTTGCATTGCAT back to topprotein sequence of rna9987 >rna9987-protein ID=rna9987-protein|Name=rna9987|organism=Nannochloropsis gaditana|type=polypeptide|length=291bp
MSYLLPSTIAIPRWRLPFPQYFSLPLLLLLVVDLLNRTHAFQAGRLALKH
LNEGIRSPPLMLQRPCWPLRVKGADLPPSSSSTTAAVTSSSSYTQAASVA
ILRDAARHRKVDKSQVIAALEVLEGSKLPSPSSKKPGILSTLFPASGTPS
LLSSLLEAGGDKGGEWEIVFSSLLGAGYMPALVCEVVSVSALSSPSSSPS
SSPSAPLPASRPIRIDTSAAGGLLPLGCVVGDYVWEGNKMTFGFNRFELG
PLSLQLGKKMKFYTFFWVDDQIACARSSTGGLTLMLVNSER back to topmRNA from alignment at KK037259.1:59459..61745+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9987 ID=rna9987|Name=rna9987|organism=Nannochloropsis gaditana|type=mRNA|length=2287bp|location=Sequence derived from alignment at KK037259.1:59459..61745+ (Nannochloropsis gaditana)
GATAAATTTGCGTCATCCTCTGCGATTTCCTCACTCATTCCATCTCTCGC
TATCAACCTCCCCCAATTCAAAATCCATGCCAAACAGGTGCCCCACCTGG
CATCAATTATCCGGCAATTTTTGATCATACATGTAATTTATCGGCCGAGC
TGCTTCAAATATGTCTTATCTTTTACCCTCTACCATCGCCATCCCGCGCT
Ggcgcctcccttttccccagtatttctccctgcctcttctccttctcctg
gtgGTTGACCTCCTCAACCGGACCCATGCCTTCCAAGCGGGCCGGCTAGC
GTTGAAGCATCTCAATGAAGGTATTAGGTCTCCGCCACTCATGTTGCAAA
GGCCCTGTTGGCCTCTCCGTGGTACGTCATCATGTCCGTTTGGCAACTTT
GGTCGATCCGGTAATGCCAGCCTCGATGTCTTCCACATGTtaccctcttt
tttcttcgcatcctcttctttctcagTGAAGGGCGCAGACCTtccgccat
cctcttcgtcgactaccgccgccgtcacgtcctcctcctcttacACACAA
GCGGCTTCCGTCGCCATATTGCGGGACGCTGCGCGTCACAGGAAAGGTGA
TTAAGCTGTGTTTATCGGGGTCAAGAGAAGTGGAAGGGCTTGGTTGTAGA
CGTAGGGggtggggtgggggaaggacaaATTGGTAGAAGGGAAGAGCTTG
GTCGTAGACGtagggggtgggggtgggggaaggacaaATCGGTAGCAAAG
GAGCACGGGCATCGATgaagagggcaaagggaaCTTTGCAAGCCGAATTT
ATTAGTGTTTTGACCCCGGAAGACCACTCAAATCCTCTCCCGCACTTTCC
TATGCTCCATCCCGGGGGCTAGTCGATAAATCTCAGGTGATAGCCGCCCT
CGAGGTCCTGGAAGGGTCGAagctcccctctccctcttccaaaaaGCCCG
gcatcctctccaccctGTTCCCCGCGTCCggcacgccctcccttctttcc
tcgcttctagaggccgggggggacaAAGGGGGCGAGTGGGAGATtgtttt
ctcctccctcctaggAGCCGGCTATATGCCTGCCCTCGTATGCGAGGTGG
TGTCCGTAAgcgccttgtcctctccctcctcctctccctcctcctcgccc
tcggctCCACTCCCTGCGTCTCGCCCCATCCGTATTGACACCTCAGCAGC
GGGCGGCCTTCTGCCCCTGGGATGTGTCGTGGGAGACTATgtgtgggaag
gaaacaaaATGACCTTTGGCTTCAATCGATTcgaggtgaggaggacaaTG
GGTTCAGGAAATGAGTAAAATACATAGTGGTCTGGATAAAATGAAATGAA
TATCTTAGTGTCGTTCGTCAttatcccttcctcttgtacCGTGGTCTGCC
AGCTCGGGCCTTTGTCACTCCAattggggaaaaaaatgaaattcTATACA
TTCTTCTGGGTTGACGATCAGGTACGTGGTGTGTAAAACCGATTTAGCCG
AGGCAGAAAGCCTATGAAATTCCCTCCGtgtttcatttttttgggtgtTC
GAACGATAGAGATGGACAAAACGTGTAACATGAGTCCTGACGAAGGTTGT
CGGAATGTGCACTAACGTTGCATGAGATCCGAGCAAAGTTTTAATACTCG
AATATTGTGTACGATTTTTGAAAATTATTGCTGTTTTCTTCTTTAATCTC
ATCTCTTTCTCGTTTCCATATAACTTAGATTGCATGCGCAAGGAGTAGCA
CTGGGGGCCTGACTTTGATGCTTGTTAATTCTGAAAGATAAAATTAGAGG
CAGGGTGATAAACATCTATGACGTCGATGAGGCTTGTTGCAAACGAAATA
GAGTCTTTCTCGAAGTCTTCAATTTATATCTTACTATTTTACCTTCGCAG
TCAAGCATTCATAAAGTATTCGTGTTCAAGAATAAAATTCTTTGATATTC
CATTTTCTTCGTGTATGGTGTTATCTTACAAGTAACCATGTTTGACCGCA
AATATCTCGGGTACAGACAAATACCCCCCTTAATTCCACCACGACGATGC
GTGTAGCTGTGTTTGCTTGTAGTAAGGTTGAATAAAGCCATGGACATGAG
GTAACTCTTGTACTCATGAGGGCTGATCCATCTTGCTTTAGGGTTTTTTG
AACGTCCGTAGGCATCGAcgttcaaaatttcaaactGCGAGTGTCTCAAG
AAACGGTCAGCGCTCGGAGCTGCAGCGTGACTAGTATTTTCGTGCACCTG
GGCATGGTTTGAAACAAAAAGTTTTGGAAGGACTTCA back to topCoding sequence (CDS) from alignment at KK037259.1:59459..61745+ >rna9987 ID=rna9987|Name=rna9987|organism=Nannochloropsis gaditana|type=CDS|length=4380bp|location=Sequence derived from alignment at KK037259.1:59459..61745+ (Nannochloropsis gaditana)
ATGTCTTATCTTTTACCCTCTACCATCGCCATCCCGCGCTGgcgcctccc
ttttccccagtatttctccctgcctcttctccttctcctggtgGTTGACC
TCCTCAACCGGACCCATGCCTTCCAAGCGGGCCGGCTAGCGTTGAAGCAT
CTCAATGAAGGTATTAGGTCTCCGCCACTCATGTTGCAAAGGCCCTGTTG
GCCTCTCCGTGTGAAGGGCGCAGACCTtccgccatcctcttcgtcgacta
ccgccgccgtcacgtcctcctcctcttacACACAAGCGGCTTCCGTCGCC
ATATTGCGGGACGCTGCGCGTCACAGGAAAGTCGATAAATCTCAGGTGAT
AGCCGCCCTCGAGGTCCTGGAAGGGTCGAagctcccctctccctcttcca
aaaaGCCCGgcatcctctccaccctGTTCCCCGCGTCCggcacgccctcc
cttctttcctcgcttctagaggccgggggggacaAAGGGGGCGAGTGGGA
GATtgttttctcctccctcctaggAGCCGGCTATATGCCTGCCCTCGTAT
GCGAGGTGGTGTCCGTAAgcgccttgtcctctccctcctcctctccctcc
tcctcgccctcggctCCACTCCCTGCGTCTCGCCCCATCCGTATTGACAC
CTCAGCAGCGGGCGGCCTTCTGCCCCTGGGATGTGTCGTGGGAGACTATg
tgtgggaaggaaacaaaATGACCTTTGGCTTCAATCGATTcgagCTCGGG
CCTTTGTCACTCCAattggggaaaaaaatgaaattcTATACATTCTTCTG
GGTTGACGATCAGATTGCATGCGCAAGGAGTAGCACTGGGGGCCTGACTT
TGATGCTTGTTAATTCTGAAAGATAAATGTCTTATCTTTTACCCTCTACC
ATCGCCATCCCGCGCTGgcgcctcccttttccccagtatttctccctgcc
tcttctccttctcctggtgGTTGACCTCCTCAACCGGACCCATGCCTTCC
AAGCGGGCCGGCTAGCGTTGAAGCATCTCAATGAAGGTATTAGGTCTCCG
CCACTCATGTTGCAAAGGCCCTGTTGGCCTCTCCGTGTGAAGGGCGCAGA
CCTtccgccatcctcttcgtcgactaccgccgccgtcacgtcctcctcct
cttacACACAAGCGGCTTCCGTCGCCATATTGCGGGACGCTGCGCGTCAC
AGGAAAGTCGATAAATCTCAGGTGATAGCCGCCCTCGAGGTCCTGGAAGG
GTCGAagctcccctctccctcttccaaaaaGCCCGgcatcctctccaccc
tGTTCCCCGCGTCCggcacgccctcccttctttcctcgcttctagaggcc
gggggggacaAAGGGGGCGAGTGGGAGATtgttttctcctccctcctagg
AGCCGGCTATATGCCTGCCCTCGTATGCGAGGTGGTGTCCGTAAgcgcct
tgtcctctccctcctcctctccctcctcctcgccctcggctCCACTCCCT
GCGTCTCGCCCCATCCGTATTGACACCTCAGCAGCGGGCGGCCTTCTGCC
CCTGGGATGTGTCGTGGGAGACTATgtgtgggaaggaaacaaaATGACCT
TTGGCTTCAATCGATTcgagCTCGGGCCTTTGTCACTCCAattggggaaa
aaaatgaaattcTATACATTCTTCTGGGTTGACGATCAGATTGCATGCGC
AAGGAGTAGCACTGGGGGCCTGACTTTGATGCTTGTTAATTCTGAAAGAT
AAATGTCTTATCTTTTACCCTCTACCATCGCCATCCCGCGCTGgcgcctc
ccttttccccagtatttctccctgcctcttctccttctcctggtgGTTGA
CCTCCTCAACCGGACCCATGCCTTCCAAGCGGGCCGGCTAGCGTTGAAGC
ATCTCAATGAAGGTATTAGGTCTCCGCCACTCATGTTGCAAAGGCCCTGT
TGGCCTCTCCGTGTGAAGGGCGCAGACCTtccgccatcctcttcgtcgac
taccgccgccgtcacgtcctcctcctcttacACACAAGCGGCTTCCGTCG
CCATATTGCGGGACGCTGCGCGTCACAGGAAAGTCGATAAATCTCAGGTG
ATAGCCGCCCTCGAGGTCCTGGAAGGGTCGAagctcccctctccctcttc
caaaaaGCCCGgcatcctctccaccctGTTCCCCGCGTCCggcacgccct
cccttctttcctcgcttctagaggccgggggggacaAAGGGGGCGAGTGG
GAGATtgttttctcctccctcctaggAGCCGGCTATATGCCTGCCCTCGT
ATGCGAGGTGGTGTCCGTAAgcgccttgtcctctccctcctcctctccct
cctcctcgccctcggctCCACTCCCTGCGTCTCGCCCCATCCGTATTGAC
ACCTCAGCAGCGGGCGGCCTTCTGCCCCTGGGATGTGTCGTGGGAGACTA
TgtgtgggaaggaaacaaaATGACCTTTGGCTTCAATCGATTcgagCTCG
GGCCTTTGTCACTCCAattggggaaaaaaatgaaattcTATACATTCTTC
TGGGTTGACGATCAGATTGCATGCGCAAGGAGTAGCACTGGGGGCCTGAC
TTTGATGCTTGTTAATTCTGAAAGATAAATGTCTTATCTTTTACCCTCTA
CCATCGCCATCCCGCGCTGgcgcctcccttttccccagtatttctccctg
cctcttctccttctcctggtgGTTGACCTCCTCAACCGGACCCATGCCTT
CCAAGCGGGCCGGCTAGCGTTGAAGCATCTCAATGAAGGTATTAGGTCTC
CGCCACTCATGTTGCAAAGGCCCTGTTGGCCTCTCCGTGTGAAGGGCGCA
GACCTtccgccatcctcttcgtcgactaccgccgccgtcacgtcctcctc
ctcttacACACAAGCGGCTTCCGTCGCCATATTGCGGGACGCTGCGCGTC
ACAGGAAAGTCGATAAATCTCAGGTGATAGCCGCCCTCGAGGTCCTGGAA
GGGTCGAagctcccctctccctcttccaaaaaGCCCGgcatcctctccac
cctGTTCCCCGCGTCCggcacgccctcccttctttcctcgcttctagagg
ccgggggggacaAAGGGGGCGAGTGGGAGATtgttttctcctccctccta
ggAGCCGGCTATATGCCTGCCCTCGTATGCGAGGTGGTGTCCGTAAgcgc
cttgtcctctccctcctcctctccctcctcctcgccctcggctCCACTCC
CTGCGTCTCGCCCCATCCGTATTGACACCTCAGCAGCGGGCGGCCTTCTG
CCCCTGGGATGTGTCGTGGGAGACTATgtgtgggaaggaaacaaaATGAC
CTTTGGCTTCAATCGATTcgagCTCGGGCCTTTGTCACTCCAattgggga
aaaaaatgaaattcTATACATTCTTCTGGGTTGACGATCAGATTGCATGC
GCAAGGAGTAGCACTGGGGGCCTGACTTTGATGCTTGTTAATTCTGAAAG
ATAAATGTCTTATCTTTTACCCTCTACCATCGCCATCCCGCGCTGgcgcc
tcccttttccccagtatttctccctgcctcttctccttctcctggtgGTT
GACCTCCTCAACCGGACCCATGCCTTCCAAGCGGGCCGGCTAGCGTTGAA
GCATCTCAATGAAGGTATTAGGTCTCCGCCACTCATGTTGCAAAGGCCCT
GTTGGCCTCTCCGTGTGAAGGGCGCAGACCTtccgccatcctcttcgtcg
actaccgccgccgtcacgtcctcctcctcttacACACAAGCGGCTTCCGT
CGCCATATTGCGGGACGCTGCGCGTCACAGGAAAGTCGATAAATCTCAGG
TGATAGCCGCCCTCGAGGTCCTGGAAGGGTCGAagctcccctctccctct
tccaaaaaGCCCGgcatcctctccaccctGTTCCCCGCGTCCggcacgcc
ctcccttctttcctcgcttctagaggccgggggggacaAAGGGGGCGAGT
GGGAGATtgttttctcctccctcctaggAGCCGGCTATATGCCTGCCCTC
GTATGCGAGGTGGTGTCCGTAAgcgccttgtcctctccctcctcctctcc
ctcctcctcgccctcggctCCACTCCCTGCGTCTCGCCCCATCCGTATTG
ACACCTCAGCAGCGGGCGGCCTTCTGCCCCTGGGATGTGTCGTGGGAGAC
TATgtgtgggaaggaaacaaaATGACCTTTGGCTTCAATCGATTcgagCT
CGGGCCTTTGTCACTCCAattggggaaaaaaatgaaattcTATACATTCT
TCTGGGTTGACGATCAGATTGCATGCGCAAGGAGTAGCACTGGGGGCCTG
ACTTTGATGCTTGTTAATTCTGAAAGATAA back to top
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