EWM20718.1, cds9956 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM20718.1 vs. NCBI_GenBank
Match: gi|585100564|gb|EWM20718.1| (hypothetical protein Naga_100385g3 [Nannochloropsis gaditana]) HSP 1 Score: 579.711 bits (1493), Expect = 0.000e+0 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0 Query: 1 MSYLLPSTIAIPRWRLPFPQYFSLPLLLLLVVDLLNRTHAFQAGRLALKHLNEGIRSPPLMLQRPCWPLRVKGADLPPSSSSTTAAVTSSSSYTQAASVAILRDAARHRKVDKSQVIAALEVLEGSKLPSPSSKKPGILSTLFPASGTPSLLSSLLEAGGDKGGEWEIVFSSLLGAGYMPALVCEVVSVSALSSPSSSPSSSPSAPLPASRPIRIDTSAAGGLLPLGCVVGDYVWEGNKMTFGFNRFELGPLSLQLGKKMKFYTFFWVDDQIACARSSTGGLTLMLVNSER 291 MSYLLPSTIAIPRWRLPFPQYFSLPLLLLLVVDLLNRTHAFQAGRLALKHLNEGIRSPPLMLQRPCWPLRVKGADLPPSSSSTTAAVTSSSSYTQAASVAILRDAARHRKVDKSQVIAALEVLEGSKLPSPSSKKPGILSTLFPASGTPSLLSSLLEAGGDKGGEWEIVFSSLLGAGYMPALVCEVVSVSALSSPSSSPSSSPSAPLPASRPIRIDTSAAGGLLPLGCVVGDYVWEGNKMTFGFNRFELGPLSLQLGKKMKFYTFFWVDDQIACARSSTGGLTLMLVNSER Sbjct: 1 MSYLLPSTIAIPRWRLPFPQYFSLPLLLLLVVDLLNRTHAFQAGRLALKHLNEGIRSPPLMLQRPCWPLRVKGADLPPSSSSTTAAVTSSSSYTQAASVAILRDAARHRKVDKSQVIAALEVLEGSKLPSPSSKKPGILSTLFPASGTPSLLSSLLEAGGDKGGEWEIVFSSLLGAGYMPALVCEVVSVSALSSPSSSPSSSPSAPLPASRPIRIDTSAAGGLLPLGCVVGDYVWEGNKMTFGFNRFELGPLSLQLGKKMKFYTFFWVDDQIACARSSTGGLTLMLVNSER 291
BLAST of EWM20718.1 vs. NCBI_GenBank
Match: gi|553194203|ref|XP_005855905.1| (hypothetical protein NGA_0555900 [Nannochloropsis gaditana CCMP526] >gi|422293149|gb|EKU20449.1| hypothetical protein NGA_0555900 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 181.8 bits (460), Expect = 3.865e-54 Identity = 124/142 (87.32%), Postives = 126/142 (88.73%), Query Frame = 0 Query: 102 LRDAARHRKVDKSQVIAALEVLEGSKLPSPSSKKPGILSTLFPASGTPSLLSSLLEAGGDKGGEWEIVFSSLLGAGYMPALVCEVVSVSALSSPSSSPSSSPSAPLPASRPIRIDTSAAGGLLPLGCVVGDYVWEGNKMTFG 243 LR + V S VIAALEVLEGSKLPSPSSKKPGILSTLFPASGTPSLLSSLLEAGGDKGGEWEIVFSSLLGAGYMPALVCEVVSVSALSSPSSSPSSSPSAPLPASRPIRIDTSAAGGLLPLGCVVGDYV + G Sbjct: 6 LRHSCCKGPVGLSVVIAALEVLEGSKLPSPSSKKPGILSTLFPASGTPSLLSSLLEAGGDKGGEWEIVFSSLLGAGYMPALVCEVVSVSALSSPSSSPSSSPSAPLPASRPIRIDTSAAGGLLPLGCVVGDYVLHAQGVALG 147
BLAST of EWM20718.1 vs. NCBI_GenBank
Match: gi|299115671|emb|CBN75871.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 60.8474 bits (146), Expect = 2.259e-7 Identity = 58/190 (30.53%), Postives = 79/190 (41.58%), Query Frame = 0 Query: 100 AILRDAARHRKVDKSQVIAALEVLEGSKLPSPSSKKPGILSTLFPASGTPSLLSSLLEAGGDKGGEWEIVFSSLLGAGYMPALVCEVVSVSALSSPSSSPSSSPSAPLPASRPIRIDTSAAGGLLPLGCVVGDYVWEG---NKMTFGFNRFELGPLSLQLGK-KMKFYTFFWVDDQIACARSSTGGLTLM 285 A+LR A RKV ++V AL VL G+P L D G WE+VFS+ L +GYMP + E+V P+ ID +A G LP+G + G W G N++ F +LGP K ++K Y FF D ++ ARSS GG L+ Sbjct: 75 AVLRTAVETRKVPMTEVSEALRVLAAD-------------------GGSP-----LACGAEDVEGSWELVFSTQLKSGYMP--IRELVGF-----------------YPSREEASIDATA--GPLPIGGMRGKCWWRGGEENELAFMLGAVKLGPFKFGKDKNEVKTYKFFVNDGKVLAARSSAGGFALL 219 The following BLAST results are available for this feature:
BLAST of EWM20718.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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