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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101854g1.5751.mrna |
| Orig protein id | gnl|cribi|Naga_101854g1.5751 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037259.1 | supercontig | KK037259.1:32117..33546 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9975 ID=rna9975|Name=rna9975|organism=Nannochloropsis gaditana|type=mRNA|length=3507bp
ATGAAGAGGGCAGATGCGGATATGGACGACCTACTGCCTTCCTTCCCCGT
GCATGCTAGTGGTCAAGGCGAGGACTGGGAGGAGGAAGAGGAGGAGGAAG
GGGAGGCGGGAGGGGGGGAGGAAGGGGGGAAGGAAGGCCAACTTTTACTT
CCACGAATGGATCGTCTTCCCGAGGCAAGCAAAGCGCTGGGGAATGTCCG
GCTCCCTATTCTTGATCGAAAGGAGGAGATAGTCAGGGCAATCGCCACGC
ATCCAGTGGTCATTATCGAGGGGGAGACGGGATGTGGGAAGAGCACTCAA
GTGCCGAAATTCATCATTCAGGCTGACCCCTTGGCCCGCCTGGCAATCAC
CACACCCACCCGGAAGGCGGCCACAAACCTGGCCAAGGAGGTCGCGCGCC
AGCTGGGAGAGGACGTGGGCCGCACCGTGGGCTACCGCATCGGCAACGAC
CGCTCCGCCGACAAGGACAGAGCCAGAATTCTCTTCGTGACCGCGGGCTG
GCTCTTGCAGAAGCTCGTCCATTCCCAGGGCCGGGCGCTCTATTCGCACG
TGTTGCTCGACGAGGTCCACGAGCGAAGTATCGAATCGGACCTCTTGTGT
TTTATCCTCAGGGACCGTCTGAGTGCAGCTTCCTCCTCTGGCCAGGCTGC
ACCTAAACTAATTCTGATGTCAGCCACGCTCCAGAGCAGCATCTTCCAGG
ACTACTTTCACCCTGCTCTGCTAGGTTCCTCCCCACCTCCTTCCTCCAGT
TCCTCGGACGCGCTCTCCCATCTTGTTTCTTGCGAGAGGACTGGGAATGG
TGGGATTCCCGGGAGGGAATCAACGAAGGAGGGAACGGGAACCTCGGGCG
TGGGGCGCGCGGGTTTCTACGAAAAGGAGGAGGAGTGGAGGGAGGGAGGG
AAAGAGGAGGATGACGACGAAGAGAAGGATGAAGAGGTGCCGACGCTGCA
CGTGGGCGCCAAAAGCCCTTTCTCGGTTACGGAGGTCTACCTGGAGGACC
TCCGTGGCTTCTGTGCTTTCCTGGAGGCGGACCTCGCGCTATCCTGCTTC
GTCGACTCCATGGTCAAACGCGGAGAAAGCATGGCAGGGAGCAAGCCGGC
CCTGGAGGAGAAGATGATGACGATTGCCGTCAAGCTTCTCTCCTCCTTGG
TCGCACCAGGGCAGGTAGCCCTGGTTTTTGTCGCAGGCATGGCCGACATC
GAGGACCTTCACACGCACTTCTCCGACCTGCTCCCTCCGCATAAACTCGC
GAGCCTGGAGATTCTCCCCTTCCATTCCCTCATTTCCGTCGAGGAAACGG
ACAAAGTCTTCGAGCCCTCGCCCACTCGATCCAAGATCATCATCGCCACC
AACATCGCCGAAGCCTCCCTGACCATTAATGACGTCAAGTTCGTTGTCGA
TTTCGGCGTCGCCAAGGCCCTCCGCTATGACATATTGGAGCATCGAACGG
TCCTTGGCTACAGCTGGGTCTCGCAGGCAAGCGCCAACCAACGTCGAGGA
CGCACGGGGCGTGTCTGTGATGGCTTTGTCATTCGACTCTATACGAGGGC
CTTCTTTGCTTCTCTCTCCCCGCACGACGAGCCAGAGATCCTGACGAAGC
CTTTGGACGCCGTCATTCTCCAGATGAAGATCATGGAATTTCCGGATCCG
ATTCAAGCTCTTATGCGCTGTATCACCCCTCCCGAAGTGGAGCAGGTGAC
AGCTGCCACCGGATATTTGTTCGAAATCGGGGCGTTGGAGGCGAATGACG
CGACCTCTCCCACCACAGCTCTGGGCCCCCTTCTAAACACTTTAGGAGTC
GACCTGCCGATCGCGAGGATGATGATCTTGGGATGCGTGCTGGGCGTGGG
CCTCGAGGCGATCGTCATGGCGGCAAGCCTGTGCCTTCCTCAGGATGTCT
TCCGCCTCCCTCACCCCACATTCAGCAAATCTATCCCCGCATTTTTCCAC
GAGATGGGCCGTGTCCAATTTTACAAAGAAGCGTACTCCTACGGCCTGGC
CTCGGATCCCCTCACCACTCTCGTCGTCTTCTCAGCTTTCCTTCGCATGG
TGCAAGATACTTCTTCCTCTCTCGCTGCCTCTTCCGTCGGTCCCACCACT
GTTCGCGGCAAGAGGGAGCTCAAGAAGCGTCAACGCGATTGGTGCACGGA
GAGAGGACTGGTATCGCGGACGCTTGACCGCCTCCATATGGTTGTCAAAG
ACCTTTCCCGCAAGCTCTCCCTCCACTCCGACGGCTCCCTCCCCACCTTC
GAGGAGGTGCACAAGACCCTTGTCAGGCCTACCTACGTGCAAGAGCTGCT
CAGAGACCAGGAAAAGATTTTCCTCCTTCGCAGCCTCCTTCTCGGCTCTT
TCCACGCCAATCTGCTGCGAGGCACCATGAGCGCCCGCGGTAATTCTGAA
GAAGATGACCGGAAGCTCGTCATTCGCCGCCCGCCGGCAGAGATCATACG
TTGCACCTCTCTGGGGGACATTTTGGGGATGGAGGAAGACATGTCCAAAA
TTCAAAGCACCAAAAACGGTCGAGACCTTGAGGTTTTGTTCTTGCCGGCG
GATTTGCGGGCTGGACGAAGGGACACGGAGGCATCCTCAGCACTCCCTTC
TTCCACCATGCCCTCGCCCGATGCGGTCTCAGCGTCGCCCCTCGCTCCAT
TCCCTCCTTTCGGGCCGGGGCAACACGGCTTTAGGGACGTGCACTTCGCG
GTTAAGGCCCTACTCAACAGCAAGACCGGACTTAGCCTTAAGGTAGAGAA
TCCTACACTAGGAGCAGCGAAACACGAAGAGGAGGATGGAGACGAGGAAG
AAGAGGAGGAAGAAGAGGAAGGCGCAAGGGGGGGAAAGAAGAAGCGAAGA
GGCACGCTTGGCAGTCAGACGAAAGAGAAAGGGAATGCGCGGCTCCTAGA
ATTGGACGTGATAGGCAAGTATGCGATGCAGTGGAAGTGTCTGAAGATGG
ACGTTCGGGTCGGCTTCCCCAAGGCCTCCATCCTGCGGAACGCGGCGGTC
TCGTGCACTGCCCTGTCGAAGCTGCCCTCTTCCTCTTCACCAGCGCCTGG
CCCCTCAGTCCTTTACGCCGTCACCCCTCAAATTTCCAAGTTCCTTTCAA
GAGAGCAAATCCCGTTTTATTCAGCACCACGGGCCACGCTCCTCCCTTTC
CCCGAAAGCCTTTTGGCTGTCCTCATCGCGGTCTTCTCCAGGAACGAAGT
CATCAGCTTCCGCCACCTTCGGTCAGACGCCGAGGAAGTCATCGCTGAGA
TGCTCGAGGGCGAGGCGGAGGAAGGAGAGGAGGTGAGAAAGGAGGGGGGG
AATGGAGGAGGAAGACGGGGAGGACAAGGGGGGCTGAGAAATGGGAGCTA
CAGAGAGAGCGGGGGGACAAGCAGAGAGCTAGCATCGAGGAGAAGGGAAG
GAGGGAGTGGTTCTCCCACCCTTGCAAGTTCACCAAGCACGTGCTACGAG
TCATCAACGACATCCGTCGCGCCATATCCCAGGCTGTTGCGGGGGAAGGA
CGGGTGA back to topprotein sequence of rna9975 >rna9975-protein ID=rna9975-protein|Name=rna9975|organism=Nannochloropsis gaditana|type=polypeptide|length=164bp
MAVIQAFLRHHPPFAQVWTRSLAYYSHDKKSPALEQPSLAPSVPPFLALV
REAEEEARAQLDKNGTDMLKGLLSLSLVSEPQHTPQQPQQPRRLGGRQGH
RRQAPPPPQRVYKVPLLFEHLRSRQHRDCPPSSHTIARPLRRLLYGLVGV
DGPVWEQILLADDM back to topmRNA from alignment at KK037259.1:32117..33546- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9975 ID=rna9975|Name=rna9975|organism=Nannochloropsis gaditana|type=mRNA|length=1430bp|location=Sequence derived from alignment at KK037259.1:32117..33546- (Nannochloropsis gaditana)
ATGGCCGTCATTCAAGCCTTCCTCCGGCATCATCCTCCCTTCGCCCAAGT
TTGGACCCGTTCTTTGGTCAGGCAACCTCCTCCCCTCTCTCCTCCCCTCT
TCCCCCCCCCTAGTCCTCCCCCCTTTCTTCTTCTTGCTCTCCTGGTGTCG
GACGCCGACTCCTCCCCTCACCTTCAACCTCCCCGCCTCCTTGTTCCATC
CCTTTCCTGTTTTTCCCTTCCTCGTGCTCTGTCCACTGCAGGCATACTAC
AGCCACGATAAAAAATCACCTGCCCTTGAACAGCCCTCTCTCGCCCCCTC
CGTCCCTCCCTTCCTCGCCCTTGTGAGGGAGGCAGAGGAGGAAGCCCGCG
CCCAGCTCGACAAAAATGGTGCGGAAGAGAGGGAAAGAGGGAGGGCGAGA
GGCAGGGGGGGGGAAGGGAGAGAGAAAAGGGAGGGAGGGAAGGAGTCGAA
CGAGAGACCTCGATGGCAATATATAGTCTTTCTAGGCCCCGCTCCCTCCT
TCCCCCTCCCTTCCCTCTCCCCCCTCCCTGTCTCCCTACTTCCCCCCCTC
CCTCCTTCCCACTCGTCAAAAGAGGGTCGACTGCCCTCCTCTCTCCACCT
CACGGCTCCTCCCCTCTTCTTCCCTCCTTGCCCGCCCGTCCGCAGGCTAC
CCCCCCTACCTGGTCCGCGCCCTCTTCACCGGGCGGGTCTCCCCCTCCCT
AGCGCGCCTCATGCTGGCTCCACCGCCCCTCCCCTCTCCTTCCGAGCACG
GAGGAGGGAGGGGAGAAGGAGGGAAGGGAGGAGGCAACGGGGCCCGTGGT
GGTAAGTGTTAAGGTGAAGGTACGGGCTTGGTGGTGCCCGTATCTTTTCC
GATCTGGTAGCTCTGTCTTCGGTCGCCCCCCCCTCTTCGCTCCTCTTTCT
TCGTCCTGATCATCAGGAAAGCGCCGCCGGCTCCACTCTTGAGCACGCAC
CCCCTCCCTGCCACCCTCTCTCCTCCCCCCTCCCTTGCCAGGCACGGACA
TGTTGAAGGGGCTTCTCTCCCTCTCCCTCGTCTCCGAGCCCCAGCACACG
CCTCAGCAGCCACAGCAACCGAGACGACTGGGTGGGCGACAGGGACACCG
CAGGCAAGCTCCCCCTCCCCCGCAACGCGTGTACAAAGTCCCTCTCCTCT
TCGAGCACCTCCGCAGTCGCCAGCACCGCGGTAGGGGTCCGCCCTCCTCT
CCCTCTATCCCTGCGTGCTTCTCCCTCTGTCTCCCCCACGCTCCCTCTCA
CAAGGCGCCGCACCATGACGACACACGCTTCTCCTCTTCCCCTTCATTCC
CCCCTCGGACGACCCAGACTGCCCTCCCTCCAGCCACACCATCGCGCGCC
CGCTCCGCCGCCTCCTCTATGGCCTCGTCGGTGTAGACGGGCCGGTCTGG
GAGCAGATCCTGCTCGCTGACGATATGTAG back to topCoding sequence (CDS) from alignment at KK037259.1:32117..33546- >rna9975 ID=rna9975|Name=rna9975|organism=Nannochloropsis gaditana|type=CDS|length=1980bp|location=Sequence derived from alignment at KK037259.1:32117..33546- (Nannochloropsis gaditana)
ACTGCCCTCCCTCCAGCCACACCATCGCGCGCCCGCTCCGCCGCCTCCTC
TATGGCCTCGTCGGTGTAGACGGGCCGGTCTGGGAGCAGATCCTGCTCGC
TGACGATATGTAGGCACGGACATGTTGAAGGGGCTTCTCTCCCTCTCCCT
CGTCTCCGAGCCCCAGCACACGCCTCAGCAGCCACAGCAACCGAGACGAC
TGGGTGGGCGACAGGGACACCGCAGGCAAGCTCCCCCTCCCCCGCAACGC
GTGTACAAAGTCCCTCTCCTCTTCGAGCACCTCCGCAGTCGCCAGCACCG
CGGCATACTACAGCCACGATAAAAAATCACCTGCCCTTGAACAGCCCTCT
CTCGCCCCCTCCGTCCCTCCCTTCCTCGCCCTTGTGAGGGAGGCAGAGGA
GGAAGCCCGCGCCCAGCTCGACAAAAATGATGGCCGTCATTCAAGCCTTC
CTCCGGCATCATCCTCCCTTCGCCCAAGTTTGGACCCGTTCTTTGACTGC
CCTCCCTCCAGCCACACCATCGCGCGCCCGCTCCGCCGCCTCCTCTATGG
CCTCGTCGGTGTAGACGGGCCGGTCTGGGAGCAGATCCTGCTCGCTGACG
ATATGTAGGCACGGACATGTTGAAGGGGCTTCTCTCCCTCTCCCTCGTCT
CCGAGCCCCAGCACACGCCTCAGCAGCCACAGCAACCGAGACGACTGGGT
GGGCGACAGGGACACCGCAGGCAAGCTCCCCCTCCCCCGCAACGCGTGTA
CAAAGTCCCTCTCCTCTTCGAGCACCTCCGCAGTCGCCAGCACCGCGGCA
TACTACAGCCACGATAAAAAATCACCTGCCCTTGAACAGCCCTCTCTCGC
CCCCTCCGTCCCTCCCTTCCTCGCCCTTGTGAGGGAGGCAGAGGAGGAAG
CCCGCGCCCAGCTCGACAAAAATGATGGCCGTCATTCAAGCCTTCCTCCG
GCATCATCCTCCCTTCGCCCAAGTTTGGACCCGTTCTTTGACTGCCCTCC
CTCCAGCCACACCATCGCGCGCCCGCTCCGCCGCCTCCTCTATGGCCTCG
TCGGTGTAGACGGGCCGGTCTGGGAGCAGATCCTGCTCGCTGACGATATG
TAGGCACGGACATGTTGAAGGGGCTTCTCTCCCTCTCCCTCGTCTCCGAG
CCCCAGCACACGCCTCAGCAGCCACAGCAACCGAGACGACTGGGTGGGCG
ACAGGGACACCGCAGGCAAGCTCCCCCTCCCCCGCAACGCGTGTACAAAG
TCCCTCTCCTCTTCGAGCACCTCCGCAGTCGCCAGCACCGCGGCATACTA
CAGCCACGATAAAAAATCACCTGCCCTTGAACAGCCCTCTCTCGCCCCCT
CCGTCCCTCCCTTCCTCGCCCTTGTGAGGGAGGCAGAGGAGGAAGCCCGC
GCCCAGCTCGACAAAAATGATGGCCGTCATTCAAGCCTTCCTCCGGCATC
ATCCTCCCTTCGCCCAAGTTTGGACCCGTTCTTTGACTGCCCTCCCTCCA
GCCACACCATCGCGCGCCCGCTCCGCCGCCTCCTCTATGGCCTCGTCGGT
GTAGACGGGCCGGTCTGGGAGCAGATCCTGCTCGCTGACGATATGTAGGC
ACGGACATGTTGAAGGGGCTTCTCTCCCTCTCCCTCGTCTCCGAGCCCCA
GCACACGCCTCAGCAGCCACAGCAACCGAGACGACTGGGTGGGCGACAGG
GACACCGCAGGCAAGCTCCCCCTCCCCCGCAACGCGTGTACAAAGTCCCT
CTCCTCTTCGAGCACCTCCGCAGTCGCCAGCACCGCGGCATACTACAGCC
ACGATAAAAAATCACCTGCCCTTGAACAGCCCTCTCTCGCCCCCTCCGTC
CCTCCCTTCCTCGCCCTTGTGAGGGAGGCAGAGGAGGAAGCCCGCGCCCA
GCTCGACAAAAATGATGGCCGTCATTCAAGCCTTCCTCCGGCATCATCCT
CCCTTCGCCCAAGTTTGGACCCGTTCTTTG back to top
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