EWM20729.1, cds9944 (CDS) Nannochloropsis gaditana

Overview
NameEWM20729.1
Unique Namecds9944
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037259.1:33481..33546 -
Alignment locationKK037259.1:33179..33305 -
Alignment locationKK037259.1:32367..32555 -
Alignment locationKK037259.1:32117..32229 -

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Properties
Property NameValue
Protein idEWM20729.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101854g1.5751.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:33481..33546 -
KK037259.1supercontigKK037259.1:33179..33305 -
KK037259.1supercontigKK037259.1:32367..32555 -
KK037259.1supercontigKK037259.1:32117..32229 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20729.1 vs. NCBI_GenBank
Match: gi|585100585|gb|EWM20729.1| (hypothetical protein Naga_101854g1 [Nannochloropsis gaditana])

HSP 1 Score: 329.717 bits (844), Expect = 2.750e-114
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0 
Query:    1 MAVIQAFLRHHPPFAQVWTRSLAYYSHDKKSPALEQPSLAPSVPPFLALVREAEEEARAQLDKNGTDMLKGLLSLSLVSEPQHTPQQPQQPRRLGGRQGHRRQAPPPPQRVYKVPLLFEHLRSRQHRDCPPSSHTIARPLRRLLYGLVGVDGPVWEQILLADDM 164
            MAVIQAFLRHHPPFAQVWTRSLAYYSHDKKSPALEQPSLAPSVPPFLALVREAEEEARAQLDKNGTDMLKGLLSLSLVSEPQHTPQQPQQPRRLGGRQGHRRQAPPPPQRVYKVPLLFEHLRSRQHRDCPPSSHTIARPLRRLLYGLVGVDGPVWEQILLADDM
Sbjct:    1 MAVIQAFLRHHPPFAQVWTRSLAYYSHDKKSPALEQPSLAPSVPPFLALVREAEEEARAQLDKNGTDMLKGLLSLSLVSEPQHTPQQPQQPRRLGGRQGHRRQAPPPPQRVYKVPLLFEHLRSRQHRDCPPSSHTIARPLRRLLYGLVGVDGPVWEQILLADDM 164
The following BLAST results are available for this feature:
BLAST of EWM20729.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100585|gb|EWM20729.1|2.750e-114100.00hypothetical protein Naga_101854g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9975rna9975Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications