rna9972, rna9972 (mRNA) Nannochloropsis gaditana

Overview
Namerna9972
Unique Namerna9972
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length234
Alignment locationKK037259.1:17173..17519 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100261g6.1649.mrna
Orig protein idgnl|cribi|Naga_100261g6.1649
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:17173..17519 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100261g6gene9674Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9972rna9972-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20732.1cds9941Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9972 ID=rna9972|Name=rna9972|organism=Nannochloropsis gaditana|type=mRNA|length=234bp
ATGGACTGCCAAATCGGAAGATGGCACCAGTGGAAGAATAGTTTATGCCG
AGACATCAGATCCTCTTGGAAATCAAGCGGCAGCTCCAACAAAACTCTCC
TGCCCGACTCACCTTCATTGTTTATCAGCTTGTGCTTCAAATCTTCCATC
ACCGATTCCTCCCCCGAAGCCTTCCCGTCCACGGACCTCTACGACATCAT
ACGTGCTTCCATCAAGATATTCTTCTCTTTTTAA
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protein sequence of rna9972

>rna9972-protein ID=rna9972-protein|Name=rna9972|organism=Nannochloropsis gaditana|type=polypeptide|length=84bp
MESLRAVLEQGPQSLQMVYVVSGRDVPLQPPAVLFSTHRTHTEGRPYLIH
PGRSILCKAERRWQRALKSKVRGSVSILSMGCDS
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mRNA from alignment at KK037259.1:17173..17519+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9972 ID=rna9972|Name=rna9972|organism=Nannochloropsis gaditana|type=mRNA|length=347bp|location=Sequence derived from alignment at KK037259.1:17173..17519+ (Nannochloropsis gaditana)
ATGGAATCGCTGCGGGCAGTTCTGGAACAAGGGCCTCAGTCCCTCCAAGT
ACGCATATTTTCATATTGTTGACCGTGCATTCTTCTTCTAGCTCCTTTCG
GTCTCACGAGGTACCGacatctcttccctccccgctgtaGATGGTGTACG
TCGTCTCGGGGCGCGACGTCCCCTTGCAACCGCCTGCCGTTCTCTTCTCT
ACCCACCGCACCCACACGGAGGGCCGCCCATACCTCATTCATCCCGGTCG
CTCCATCCTCTGCAAGGCCGAGCGACGATGGCAACGGGCATTGAAGTCCA
AGGTGAGGGGCTCTGTGTCCATTCTATCCATGGGATGTGACTCTTAG
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Coding sequence (CDS) from alignment at KK037259.1:17173..17519+

>rna9972 ID=rna9972|Name=rna9972|organism=Nannochloropsis gaditana|type=CDS|length=510bp|location=Sequence derived from alignment at KK037259.1:17173..17519+ (Nannochloropsis gaditana)
ATGGAATCGCTGCGGGCAGTTCTGGAACAAGGGCCTCAGTCCCTCCAAAT
GGTGTACGTCGTCTCGGGGCGCGACGTCCCCTTGCAACCGCCTGCCGTTC
TCTTCTCTACCCACCGCACCCACACGGAGGGCCGCCCATACCTCATTCAT
CCCGGTCGCTCCATCCTCTGCAAGGCCGAGCGACGATGGCAACGGGCATT
GAAGTCCAAGGTGAGGGGCTCTGTGTCCATTCTATCCATGGGATGTGACT
CTTAGATGGAATCGCTGCGGGCAGTTCTGGAACAAGGGCCTCAGTCCCTC
CAAATGGTGTACGTCGTCTCGGGGCGCGACGTCCCCTTGCAACCGCCTGC
CGTTCTCTTCTCTACCCACCGCACCCACACGGAGGGCCGCCCATACCTCA
TTCATCCCGGTCGCTCCATCCTCTGCAAGGCCGAGCGACGATGGCAACGG
GCATTGAAGTCCAAGGTGAGGGGCTCTGTGTCCATTCTATCCATGGGATG
TGACTCTTAG
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Synonyms
Publications