rna9965, rna9965 (mRNA) Nannochloropsis gaditana

Overview
Namerna9965
Unique Namerna9965
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length765
Alignment locationKK037258.1:120655..121164 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101106g1.8455.mrna
Orig protein idgnl|cribi|Naga_101106g1.8455
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037258.1supercontigKK037258.1:120655..121164 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101106g1gene9667Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9965rna9965-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20738.1cds9934Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9965 ID=rna9965|Name=rna9965|organism=Nannochloropsis gaditana|type=mRNA|length=765bp
ATGGCGGTGGCACACCGACATGGGGACGAGTTGAGGCGCTACATTCGCCT
CAAAACCTTTGTCTGTGTCCTCATTGCGGTGCTGGTTGGCTGTTGCCTCT
CTCTCCTCCGGGTACCCTTCTCGGGACTTTTCGGGCTCCTGACGTTTGTG
CTCAACTACATTCCGAACTTTGGGCCCATCGTCGCTACGCTTCTCCCTCT
CCCTCTCGTCGTCTTCTCCCCCGATCTCTCGGTCACTGCCAAAGTCCTCG
CCCTCGTCCTCCCCTCCCTCGGGCATTTTTTCGTCGGCTACTATTTGGAA
CCCCGCCTCTTCGGGGAGCATTTGGAGGTCCATCCCATCATCATCCTTCT
TTCCCTCGCCTTCTGGTCCGTGCTCTGGGGTGTGTCGGGCATGATTCTCT
CTGTCCCACTGATCGCGTGTATGCGCATCGTCTGCCAGAATTTGGAGCAT
CCGTACGCTAGGGTGGCGGCCAGAATCATAGAAGGGCGTCTCTTCGATGC
GGGGCTCGACGGCAGAAATGGCGGAAAACCTCCATGTGCAGGAAGCGAAG
GCCCCAGGGGATATTATCAAAACAGGACGGCGGAAGAGACGCCAATTCAA
CCTGTGGACAACAACGAAGGAAAATTACAGACAGTAAGCACGATTAGAGT
GGCTTTTCCAAGCAAGAAAAGCAGTAGTCTGAATAGTGGTGTGAATTTCT
ACATGCCTGATGTGTACATAAAGATATACGGCTACGTTTTTCTTGCGGAA
ATTAAGAAGCTTTGA
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protein sequence of rna9965

>rna9965-protein ID=rna9965-protein|Name=rna9965|organism=Nannochloropsis gaditana|type=polypeptide|length=107bp
MDHPRMASKTGLSSGTASSLGVFEVPSKTYGALDDGLVGQGAKGERRYGE
KEGGVPTFRRAYSLNAIGGSDWQLGRHENLVAVCLLIVALLCLGGRGGRE
GGREGGR
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mRNA from alignment at KK037258.1:120655..121164-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9965 ID=rna9965|Name=rna9965|organism=Nannochloropsis gaditana|type=mRNA|length=510bp|location=Sequence derived from alignment at KK037258.1:120655..121164- (Nannochloropsis gaditana)
CTTTAGTGAGACAGGGACAAGATGGATCATCCCCGCATGGCCTCCAAGAC
AGGGCTGAGCAGCGGCACGGCTTCGTCGCTGGGTGTATTTGAGGTCCCTT
CAAAAACATATGGGGCTTTGGACGATGGGCTTGTTGGTCAAGGGGCAAAG
GGGGAGAGGAGATACGGAGAGAAAGAGGGAGGCGTCCCCACATTCCGGCG
GGCCTATTCCCTGAATGCCATTGGAGGTTCAGACTGGTGAGTGACAGGAA
GTGGGAAGAATCAATATTGATGGAAGGGTGGAGAGGGGGAAAAAGGAGGG
AGGGGCAGGCAAAGATGCGATTTCAACGTCCGCTCAGATATATGATTCTA
CTCGCTCCCCTCCCTTCTTATTCTTCCTTTCTTTCCTTTTCTCTTTGTCC
AGGCAACTGGGTCGTCACGAAAATCTGGTCGCTGTTTGTCTCCTGATCGT
GGCGTTGCTTTGCCTCGGTGGGAGGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGA
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Coding sequence (CDS) from alignment at KK037258.1:120655..121164-

>rna9965 ID=rna9965|Name=rna9965|organism=Nannochloropsis gaditana|type=CDS|length=646bp|location=Sequence derived from alignment at KK037258.1:120655..121164- (Nannochloropsis gaditana)
GCAACTGGGTCGTCACGAAAATCTGGTCGCTGTTTGTCTCCTGATCGTGG
CGTTGCTTTGCCTCGGTGGGAGGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAATGGATCATCCCCGCATGGCCTCCAAGACAGGGCTGAGCAGC
GGCACGGCTTCGTCGCTGGGTGTATTTGAGGTCCCTTCAAAAACATATGG
GGCTTTGGACGATGGGCTTGTTGGTCAAGGGGCAAAGGGGGAGAGGAGAT
ACGGAGAGAAAGAGGGAGGCGTCCCCACATTCCGGCGGGCCTATTCCCTG
AATGCCATTGGAGGTTCAGACTGGCAACTGGGTCGTCACGAAAATCTGGT
CGCTGTTTGTCTCCTGATCGTGGCGTTGCTTTGCCTCGGTGGGAGGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAATGGATCATCCCCGCATGG
CCTCCAAGACAGGGCTGAGCAGCGGCACGGCTTCGTCGCTGGGTGTATTT
GAGGTCCCTTCAAAAACATATGGGGCTTTGGACGATGGGCTTGTTGGTCA
AGGGGCAAAGGGGGAGAGGAGATACGGAGAGAAAGAGGGAGGCGTCCCCA
CATTCCGGCGGGCCTATTCCCTGAATGCCATTGGAGGTTCAGACTG
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Synonyms
Publications