EWM20738.1, cds9934 (CDS) Nannochloropsis gaditana

Overview
NameEWM20738.1
Unique Namecds9934
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037258.1:120929..121143 -
Alignment locationKK037258.1:120655..120762 -

Link to JBrowse

Properties
Property NameValue
Start range120655
Start range.
Protein idEWM20738.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101106g1.8455.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037258.1supercontigKK037258.1:120929..121143 -
KK037258.1supercontigKK037258.1:120655..120762 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20738.1 vs. NCBI_GenBank
Match: gi|585100598|gb|EWM20738.1| (hypothetical protein Naga_101106g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 213.386 bits (542), Expect = 5.358e-70
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0 
Query:    1 MDHPRMASKTGLSSGTASSLGVFEVPSKTYGALDDGLVGQGAKGERRYGEKEGGVPTFRRAYSLNAIGGSDWQLGRHENLVAVCLLIVALLCLGGRGGREGGREGGR 107
            MDHPRMASKTGLSSGTASSLGVFEVPSKTYGALDDGLVGQGAKGERRYGEKEGGVPTFRRAYSLNAIGGSDWQLGRHENLVAVCLLIVALLCLGGRGGREGGREGGR
Sbjct:    1 MDHPRMASKTGLSSGTASSLGVFEVPSKTYGALDDGLVGQGAKGERRYGEKEGGVPTFRRAYSLNAIGGSDWQLGRHENLVAVCLLIVALLCLGGRGGREGGREGGR 107
The following BLAST results are available for this feature:
BLAST of EWM20738.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100598|gb|EWM20738.1|5.358e-70100.00hypothetical protein Naga_101106g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9965rna9965Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications