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Properties
| Property Name | Value |
|---|
| Product | membrane protein- a permease |
| Orig transcript id | gnl|cribi|Naga_100249g9.5592.mrna |
| Orig protein id | gnl|cribi|Naga_100249g9.5592 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037258.1 | supercontig | KK037258.1:117955..119934 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9964 ID=rna9964|Name=rna9964|organism=Nannochloropsis gaditana|type=mRNA|length=1313bp
TGTGCAATTATGGTATGCATTTATATATATCTCACACGCTTGTCAATCTA
AATCAAGAAAACACAGGGAGATAGTGTCAAAAATATGCACGACGTGGACG
ATCACGAGGATCTTACAGGAGCTACGGGCCTGCCGCGCCAGTTGAAAGTA
TTGGACTGTAAACTTCGCGTTTTAATGGACTCATGCCTCTCTTCATCGTC
GCAAACTGCAGATGTCGAGTACGTACATTCAACGCTCATTTCAGAACTTG
AAGCAGAACATATTGTTTCAATAGAAGATGTTTTTAGCGTCATACAGACA
TTCGTTCCAGAAGAAATGCTGCTATCATTGGGCATTGAAGATGAAGATGA
TATAGAGCTCTTTGTGAGTAAAGTGTGGCTGCTTCTACAAAAGGAACGAG
TAATCCAAGAAACAACTGATGATGAAGTGATGAGTATGAGCAGGGAATCG
GGATGTGAGCTGTGTGAGCGTGCAATGCCTCTGACAAGGCATCATCTTCG
GCCCCGCGCCATGCACAAGATACTTTTAAAGCAGGGCATGAGTCAAGACG
AACTAAACATTTGTGCTGCAATATGCAGACCCTGTCATTCAGCAGTGCAT
AGGACTTACGACAATGAAACGCTGGCCATTAATTTTTATACGGTTTCTGC
GCTTCTAGCCGACGAAAAAATTGGCAAATTTGTTCGCTGGGCGAGCAAAC
AACGGGGACGCGAACAAAAAATGGGGCACAATCCTCTTCTGAAATACCAA
CGCTAGTAGTATATTGAGAGGTAGGATAAAGTATGGAACTTTTGACACAT
GTAATGGCAAAAGTACTGTACGTGCTGGATAAAGGTTTCTGAAGAAGCAT
AAAGTGATCCAGAATATTTTAAGGAAGCTTCGCAGGTATTGATCATGTTA
TGCGCTGTATACTGTCGACTAAGGTTTCCGTTGTAAATGACTTCACAAAG
GGCGCTATGAAATTTAATGTTGCAGCATTTATCGCTCTATGTGAAAGAAA
TTTCGTGAAGGTTGATATGAGGAAAAAGTGTTCGGGCCCCTGGCACACAG
TGATGAAAAATGCATGCCATGAGTTGCGAAAGTAATGGATGACATGATCA
GAGTAGCTCAAATGGTTTTGAATGGCTAAAATATGTAAAGACTGATGTTT
CTGTACCAATACTGATGTGCTATGGAACGATAAGGATTCGTAAGGGGCTC
CCCTGTTGCAGGGTAAATCTACATAAATGTGATTATAATCATTGAACTGA
CAGACACGCAACGAAAGATCAATTGAACATGGCAATGCAATAGGATATTT
AAACCCGAAGATC back to topprotein sequence of rna9964 >rna9964-protein ID=rna9964-protein|Name=rna9964|organism=Nannochloropsis gaditana|type=polypeptide|length=254bp
MAVAHRHGDELRRYIRLKTFVCVLIAVLVGCCLSLLRVPFSGLFGLLTFV
LNYIPNFGPIVATLLPLPLVVFSPDLSVTAKVLALVLPSLGHFFVGYYLE
PRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLEH
PYARVAARIIEGRLFDAGLDGRNGGKPPCAGSEGPRGYYQNRTAEETPIQ
PVDNNEGKLQTVSTIRVAFPSKKSSSLNSGVNFYMPDVYIKIYGYVFLAE
IKKL back to topmRNA from alignment at KK037258.1:117955..119934- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9964 ID=rna9964|Name=rna9964|organism=Nannochloropsis gaditana|type=mRNA|length=1980bp|location=Sequence derived from alignment at KK037258.1:117955..119934- (Nannochloropsis gaditana)
ATGGCGGTGGCACACCGACATGGGGACGAGTTGAGGTCTATGCATGCTCG
AACCTGCGCTTGTCACCTTTTTCCCCCTCGCTCCCGTGCTTCTTCGCTTC
CTCCTTTTTCCTTCTCCGTCCCTCCGGGTTGATGTCGCGCTTGATGAATG
CGGAGGCACATTCGGCGCCGTTCCTCATCTTCCTCCCCCCTTCCCTTCCA
CCCTCTCGCCCTTCATCTTCTCACCACTTCTTTCCAGGCGCTACATTCGC
CTCAAAACCTTTGTCTGTGTCCTCATTGCGGTGCTGGTTGGCTGTTGCCT
CTCTCTCCTCCGGGTACCCTTCTCGGGACTTTTCGGGCTCCTGACGTTTG
TGCTCAACTACATTCCGAACGTAGGACATGGCCCCCATTTCCCTCTTCTA
TTCCTCCATGCTACCTCCTCCCCATTTTGTCTTCCAGCGCTTCCTTTCCT
GCTTTGCGCCCTGCTCTTCTTCCCCTCCCTTGCTAACCGCTCACCCCTTC
TTCCTCTCTCCCAGTTTGGGCCCATCGTCGCTACGCTTCTCCCTCTCCCT
CTCGTCGTCTTCTCCCCCGATCTCTCGGTCACTGCCAAAGTCCTCGCCCT
CGTCCTCCCCTCCCTCGGGCATTTTTTCGTCGGCTACTATTTGGTACGGT
CTGGGAGGAGGAAGGGTGGACAGCCCGGTCGGGAGGGTCCCGGGAGAAGA
CGATTTAAATGGTAGATTGGTGGCAGAGGGATGGGAAGGAGGGAGATAAA
GTGATCACCCTGTTGCCTTACGCCACGCACAGGAACCCCGCCTCTTCGGG
GAGCATTTGGAGGTCCATCCCATCATCATCCTTCTTTCCCTCGGTACTGT
GCCTGTCCTCCATGCGTCCTCACTTCTGGTCTCTGCCCCGCTCGTGTCAG
TGCATGGTGTCCTGTTGAATGCTATTGGTTGAATCGCCCCTGTAAGGTTC
TTTTGAATCGGCACGTCCACCTCCAGATCAAAGAGTCTCTCTGCCGTGTC
CTGGCCTCTGCCTCTCTGTTTCCCGTCATTATTGTCCCTTATACCCCTAT
TTCCCGCCTTTTGATCCGATGCCGGCGCCTGCAACCCCCCTTTTCCCCCC
TGAATCAAGTCTAGCACGACTTACTTACCCGCTCACCATCATCTCTCCTC
CATTTTCACCCGTTGCTCCAGCCTTCTGGTCCGTGCTCTGGGGTGTGTCG
GGCATGATTCTCTCTGTCCCACTGATCGCGTGTATGCGCATCGTCTGCCA
GAATTTGGAGCATCCGTACGCTAGGTAAGAGGAGTCACAGGAACGATGAG
ATGGATTGACGCCGGAGGGGAAAAGGGCAATACGAGAACGTTTGATGTTG
AATGCTCGCTGTATTGGGCTGAGCCTTCCCTGTCCGTCCTACTCACTGAC
GTGCTTTCTCATTCATGCGTCGACGTCCATGCGCTAAATTTGTGCATGTC
ACTCCGTGCGCCTTTTGCTATAACTCGAACAGGGTGGCGGCCAGAATCAT
AGAAGGGCGTCTCTTCGATGCGGGGCTCGACGGCAGAAATGGCGGAAAAC
CTCCATGTGCAGGAAGCGAAGGCCCCAGGTGATTAGGGAGGCTTGCAAGG
AGGGGTAGGGGGAGCTCGATCGAGGAATGAGGAAGTATATTCGTCATGTT
ATTAGCTTTTCTCTGCTGCACGCGGTAGACTTCTCAAGTCACATACATCA
CCCATTCCGTGCGTTGTCAGGGGATATTATCAAAACAGGACGGCGGAAGA
GACGCCAATTCAACCTGTGGGTGTAGCCCCGACTTTATCAGAGGGTGTAA
TGGCGAACCATGCTTTGTAAAGACAACAACGAAGGAAAATTACAGACAGT
AAGCACGATTAGAGTGGCTTTTCCAAGCAAGAAAAGCAGTAGTCTGAATA
GTGGTGTGAATTTCTACATGCCTGATGTGTACATAAAGATATACGGCTAC
GTTTTTCTTGCGGAAATTAAGAAGCTTTGA back to topCoding sequence (CDS) from alignment at KK037258.1:117955..119934- >rna9964 ID=rna9964|Name=rna9964|organism=Nannochloropsis gaditana|type=CDS|length=6120bp|location=Sequence derived from alignment at KK037258.1:117955..119934- (Nannochloropsis gaditana)
ACAACAACGAAGGAAAATTACAGACAGTAAGCACGATTAGAGTGGCTTTT
CCAAGCAAGAAAAGCAGTAGTCTGAATAGTGGTGTGAATTTCTACATGCC
TGATGTGTACATAAAGATATACGGCTACGTTTTTCTTGCGGAAATTAAGA
AGCTTTGAGGGATATTATCAAAACAGGACGGCGGAAGAGACGCCAATTCA
ACCTGTGGGGTGGCGGCCAGAATCATAGAAGGGCGTCTCTTCGATGCGGG
GCTCGACGGCAGAAATGGCGGAAAACCTCCATGTGCAGGAAGCGAAGGCC
CCAGCCTTCTGGTCCGTGCTCTGGGGTGTGTCGGGCATGATTCTCTCTGT
CCCACTGATCGCGTGTATGCGCATCGTCTGCCAGAATTTGGAGCATCCGT
ACGCTAGGAACCCCGCCTCTTCGGGGAGCATTTGGAGGTCCATCCCATCA
TCATCCTTCTTTCCCTCGTTTGGGCCCATCGTCGCTACGCTTCTCCCTCT
CCCTCTCGTCGTCTTCTCCCCCGATCTCTCGGTCACTGCCAAAGTCCTCG
CCCTCGTCCTCCCCTCCCTCGGGCATTTTTTCGTCGGCTACTATTTGGCG
CTACATTCGCCTCAAAACCTTTGTCTGTGTCCTCATTGCGGTGCTGGTTG
GCTGTTGCCTCTCTCTCCTCCGGGTACCCTTCTCGGGACTTTTCGGGCTC
CTGACGTTTGTGCTCAACTACATTCCGAACATGGCGGTGGCACACCGACA
TGGGGACGAGTTGAGACAACAACGAAGGAAAATTACAGACAGTAAGCACG
ATTAGAGTGGCTTTTCCAAGCAAGAAAAGCAGTAGTCTGAATAGTGGTGT
GAATTTCTACATGCCTGATGTGTACATAAAGATATACGGCTACGTTTTTC
TTGCGGAAATTAAGAAGCTTTGAGGGATATTATCAAAACAGGACGGCGGA
AGAGACGCCAATTCAACCTGTGGGGTGGCGGCCAGAATCATAGAAGGGCG
TCTCTTCGATGCGGGGCTCGACGGCAGAAATGGCGGAAAACCTCCATGTG
CAGGAAGCGAAGGCCCCAGCCTTCTGGTCCGTGCTCTGGGGTGTGTCGGG
CATGATTCTCTCTGTCCCACTGATCGCGTGTATGCGCATCGTCTGCCAGA
ATTTGGAGCATCCGTACGCTAGGAACCCCGCCTCTTCGGGGAGCATTTGG
AGGTCCATCCCATCATCATCCTTCTTTCCCTCGTTTGGGCCCATCGTCGC
TACGCTTCTCCCTCTCCCTCTCGTCGTCTTCTCCCCCGATCTCTCGGTCA
CTGCCAAAGTCCTCGCCCTCGTCCTCCCCTCCCTCGGGCATTTTTTCGTC
GGCTACTATTTGGCGCTACATTCGCCTCAAAACCTTTGTCTGTGTCCTCA
TTGCGGTGCTGGTTGGCTGTTGCCTCTCTCTCCTCCGGGTACCCTTCTCG
GGACTTTTCGGGCTCCTGACGTTTGTGCTCAACTACATTCCGAACATGGC
GGTGGCACACCGACATGGGGACGAGTTGAGACAACAACGAAGGAAAATTA
CAGACAGTAAGCACGATTAGAGTGGCTTTTCCAAGCAAGAAAAGCAGTAG
TCTGAATAGTGGTGTGAATTTCTACATGCCTGATGTGTACATAAAGATAT
ACGGCTACGTTTTTCTTGCGGAAATTAAGAAGCTTTGAGGGATATTATCA
AAACAGGACGGCGGAAGAGACGCCAATTCAACCTGTGGGGTGGCGGCCAG
AATCATAGAAGGGCGTCTCTTCGATGCGGGGCTCGACGGCAGAAATGGCG
GAAAACCTCCATGTGCAGGAAGCGAAGGCCCCAGCCTTCTGGTCCGTGCT
CTGGGGTGTGTCGGGCATGATTCTCTCTGTCCCACTGATCGCGTGTATGC
GCATCGTCTGCCAGAATTTGGAGCATCCGTACGCTAGGAACCCCGCCTCT
TCGGGGAGCATTTGGAGGTCCATCCCATCATCATCCTTCTTTCCCTCGTT
TGGGCCCATCGTCGCTACGCTTCTCCCTCTCCCTCTCGTCGTCTTCTCCC
CCGATCTCTCGGTCACTGCCAAAGTCCTCGCCCTCGTCCTCCCCTCCCTC
GGGCATTTTTTCGTCGGCTACTATTTGGCGCTACATTCGCCTCAAAACCT
TTGTCTGTGTCCTCATTGCGGTGCTGGTTGGCTGTTGCCTCTCTCTCCTC
CGGGTACCCTTCTCGGGACTTTTCGGGCTCCTGACGTTTGTGCTCAACTA
CATTCCGAACATGGCGGTGGCACACCGACATGGGGACGAGTTGAGACAAC
AACGAAGGAAAATTACAGACAGTAAGCACGATTAGAGTGGCTTTTCCAAG
CAAGAAAAGCAGTAGTCTGAATAGTGGTGTGAATTTCTACATGCCTGATG
TGTACATAAAGATATACGGCTACGTTTTTCTTGCGGAAATTAAGAAGCTT
TGAGGGATATTATCAAAACAGGACGGCGGAAGAGACGCCAATTCAACCTG
TGGGGTGGCGGCCAGAATCATAGAAGGGCGTCTCTTCGATGCGGGGCTCG
ACGGCAGAAATGGCGGAAAACCTCCATGTGCAGGAAGCGAAGGCCCCAGC
CTTCTGGTCCGTGCTCTGGGGTGTGTCGGGCATGATTCTCTCTGTCCCAC
TGATCGCGTGTATGCGCATCGTCTGCCAGAATTTGGAGCATCCGTACGCT
AGGAACCCCGCCTCTTCGGGGAGCATTTGGAGGTCCATCCCATCATCATC
CTTCTTTCCCTCGTTTGGGCCCATCGTCGCTACGCTTCTCCCTCTCCCTC
TCGTCGTCTTCTCCCCCGATCTCTCGGTCACTGCCAAAGTCCTCGCCCTC
GTCCTCCCCTCCCTCGGGCATTTTTTCGTCGGCTACTATTTGGCGCTACA
TTCGCCTCAAAACCTTTGTCTGTGTCCTCATTGCGGTGCTGGTTGGCTGT
TGCCTCTCTCTCCTCCGGGTACCCTTCTCGGGACTTTTCGGGCTCCTGAC
GTTTGTGCTCAACTACATTCCGAACATGGCGGTGGCACACCGACATGGGG
ACGAGTTGAGACAACAACGAAGGAAAATTACAGACAGTAAGCACGATTAG
AGTGGCTTTTCCAAGCAAGAAAAGCAGTAGTCTGAATAGTGGTGTGAATT
TCTACATGCCTGATGTGTACATAAAGATATACGGCTACGTTTTTCTTGCG
GAAATTAAGAAGCTTTGAGGGATATTATCAAAACAGGACGGCGGAAGAGA
CGCCAATTCAACCTGTGGGGTGGCGGCCAGAATCATAGAAGGGCGTCTCT
TCGATGCGGGGCTCGACGGCAGAAATGGCGGAAAACCTCCATGTGCAGGA
AGCGAAGGCCCCAGCCTTCTGGTCCGTGCTCTGGGGTGTGTCGGGCATGA
TTCTCTCTGTCCCACTGATCGCGTGTATGCGCATCGTCTGCCAGAATTTG
GAGCATCCGTACGCTAGGAACCCCGCCTCTTCGGGGAGCATTTGGAGGTC
CATCCCATCATCATCCTTCTTTCCCTCGTTTGGGCCCATCGTCGCTACGC
TTCTCCCTCTCCCTCTCGTCGTCTTCTCCCCCGATCTCTCGGTCACTGCC
AAAGTCCTCGCCCTCGTCCTCCCCTCCCTCGGGCATTTTTTCGTCGGCTA
CTATTTGGCGCTACATTCGCCTCAAAACCTTTGTCTGTGTCCTCATTGCG
GTGCTGGTTGGCTGTTGCCTCTCTCTCCTCCGGGTACCCTTCTCGGGACT
TTTCGGGCTCCTGACGTTTGTGCTCAACTACATTCCGAACATGGCGGTGG
CACACCGACATGGGGACGAGTTGAGACAACAACGAAGGAAAATTACAGAC
AGTAAGCACGATTAGAGTGGCTTTTCCAAGCAAGAAAAGCAGTAGTCTGA
ATAGTGGTGTGAATTTCTACATGCCTGATGTGTACATAAAGATATACGGC
TACGTTTTTCTTGCGGAAATTAAGAAGCTTTGAGGGATATTATCAAAACA
GGACGGCGGAAGAGACGCCAATTCAACCTGTGGGGTGGCGGCCAGAATCA
TAGAAGGGCGTCTCTTCGATGCGGGGCTCGACGGCAGAAATGGCGGAAAA
CCTCCATGTGCAGGAAGCGAAGGCCCCAGCCTTCTGGTCCGTGCTCTGGG
GTGTGTCGGGCATGATTCTCTCTGTCCCACTGATCGCGTGTATGCGCATC
GTCTGCCAGAATTTGGAGCATCCGTACGCTAGGAACCCCGCCTCTTCGGG
GAGCATTTGGAGGTCCATCCCATCATCATCCTTCTTTCCCTCGTTTGGGC
CCATCGTCGCTACGCTTCTCCCTCTCCCTCTCGTCGTCTTCTCCCCCGAT
CTCTCGGTCACTGCCAAAGTCCTCGCCCTCGTCCTCCCCTCCCTCGGGCA
TTTTTTCGTCGGCTACTATTTGGCGCTACATTCGCCTCAAAACCTTTGTC
TGTGTCCTCATTGCGGTGCTGGTTGGCTGTTGCCTCTCTCTCCTCCGGGT
ACCCTTCTCGGGACTTTTCGGGCTCCTGACGTTTGTGCTCAACTACATTC
CGAACATGGCGGTGGCACACCGACATGGGGACGAGTTGAGACAACAACGA
AGGAAAATTACAGACAGTAAGCACGATTAGAGTGGCTTTTCCAAGCAAGA
AAAGCAGTAGTCTGAATAGTGGTGTGAATTTCTACATGCCTGATGTGTAC
ATAAAGATATACGGCTACGTTTTTCTTGCGGAAATTAAGAAGCTTTGAGG
GATATTATCAAAACAGGACGGCGGAAGAGACGCCAATTCAACCTGTGGGG
TGGCGGCCAGAATCATAGAAGGGCGTCTCTTCGATGCGGGGCTCGACGGC
AGAAATGGCGGAAAACCTCCATGTGCAGGAAGCGAAGGCCCCAGCCTTCT
GGTCCGTGCTCTGGGGTGTGTCGGGCATGATTCTCTCTGTCCCACTGATC
GCGTGTATGCGCATCGTCTGCCAGAATTTGGAGCATCCGTACGCTAGGAA
CCCCGCCTCTTCGGGGAGCATTTGGAGGTCCATCCCATCATCATCCTTCT
TTCCCTCGTTTGGGCCCATCGTCGCTACGCTTCTCCCTCTCCCTCTCGTC
GTCTTCTCCCCCGATCTCTCGGTCACTGCCAAAGTCCTCGCCCTCGTCCT
CCCCTCCCTCGGGCATTTTTTCGTCGGCTACTATTTGGCGCTACATTCGC
CTCAAAACCTTTGTCTGTGTCCTCATTGCGGTGCTGGTTGGCTGTTGCCT
CTCTCTCCTCCGGGTACCCTTCTCGGGACTTTTCGGGCTCCTGACGTTTG
TGCTCAACTACATTCCGAACATGGCGGTGGCACACCGACATGGGGACGAG
TTGAGACAACAACGAAGGAAAATTACAGACAGTAAGCACGATTAGAGTGG
CTTTTCCAAGCAAGAAAAGCAGTAGTCTGAATAGTGGTGTGAATTTCTAC
ATGCCTGATGTGTACATAAAGATATACGGCTACGTTTTTCTTGCGGAAAT
TAAGAAGCTTTGAGGGATATTATCAAAACAGGACGGCGGAAGAGACGCCA
ATTCAACCTGTGGGGTGGCGGCCAGAATCATAGAAGGGCGTCTCTTCGAT
GCGGGGCTCGACGGCAGAAATGGCGGAAAACCTCCATGTGCAGGAAGCGA
AGGCCCCAGCCTTCTGGTCCGTGCTCTGGGGTGTGTCGGGCATGATTCTC
TCTGTCCCACTGATCGCGTGTATGCGCATCGTCTGCCAGAATTTGGAGCA
TCCGTACGCTAGGAACCCCGCCTCTTCGGGGAGCATTTGGAGGTCCATCC
CATCATCATCCTTCTTTCCCTCGTTTGGGCCCATCGTCGCTACGCTTCTC
CCTCTCCCTCTCGTCGTCTTCTCCCCCGATCTCTCGGTCACTGCCAAAGT
CCTCGCCCTCGTCCTCCCCTCCCTCGGGCATTTTTTCGTCGGCTACTATT
TGGCGCTACATTCGCCTCAAAACCTTTGTCTGTGTCCTCATTGCGGTGCT
GGTTGGCTGTTGCCTCTCTCTCCTCCGGGTACCCTTCTCGGGACTTTTCG
GGCTCCTGACGTTTGTGCTCAACTACATTCCGAACATGGCGGTGGCACAC
CGACATGGGGACGAGTTGAG back to top
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