EWM20746.1, cds9933 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20746.1 vs. NCBI_GenBank
Match: gi|585100608|gb|EWM20746.1| (membrane protein- a permease [Nannochloropsis gaditana]) HSP 1 Score: 514.227 bits (1323), Expect = 0.000e+0 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0 Query: 1 MAVAHRHGDELRRYIRLKTFVCVLIAVLVGCCLSLLRVPFSGLFGLLTFVLNYIPNFGPIVATLLPLPLVVFSPDLSVTAKVLALVLPSLGHFFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLEHPYARVAARIIEGRLFDAGLDGRNGGKPPCAGSEGPRGYYQNRTAEETPIQPVDNNEGKLQTVSTIRVAFPSKKSSSLNSGVNFYMPDVYIKIYGYVFLAEIKKL 254 MAVAHRHGDELRRYIRLKTFVCVLIAVLVGCCLSLLRVPFSGLFGLLTFVLNYIPNFGPIVATLLPLPLVVFSPDLSVTAKVLALVLPSLGHFFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLEHPYARVAARIIEGRLFDAGLDGRNGGKPPCAGSEGPRGYYQNRTAEETPIQPVDNNEGKLQTVSTIRVAFPSKKSSSLNSGVNFYMPDVYIKIYGYVFLAEIKKL Sbjct: 1 MAVAHRHGDELRRYIRLKTFVCVLIAVLVGCCLSLLRVPFSGLFGLLTFVLNYIPNFGPIVATLLPLPLVVFSPDLSVTAKVLALVLPSLGHFFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLEHPYARVAARIIEGRLFDAGLDGRNGGKPPCAGSEGPRGYYQNRTAEETPIQPVDNNEGKLQTVSTIRVAFPSKKSSSLNSGVNFYMPDVYIKIYGYVFLAEIKKL 254
BLAST of EWM20746.1 vs. NCBI_GenBank
Match: gi|298710168|emb|CBJ31878.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 182.185 bits (461), Expect = 2.241e-51 Identity = 83/161 (51.55%), Postives = 118/161 (73.29%), Query Frame = 0 Query: 10 ELRRYIRLKTFVCVLIAVLVGCCLSLLRVPFSGLFGLLTFVLNYIPNFGPIVATLLPLPLVVFSPDLSVTAKVLALVLPSLGHFFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLEHPYARVAARIIEGRLFDAGLD 170 ++RRYIRLKT V +L A +V L +L V + +FG++TFVLN++PN GP++AT LP+PL +F PD+S +VLA VLP+ H +G +EP LFGE E+ P+++LLSLAFW LWG+ GMIL+VP++ RIVC +L+HPYA+ R++EG +F+A D Sbjct: 194 QIRRYIRLKTMVGMLAATVVTTMLWVLGVQMAYVFGIITFVLNFVPNLGPMIATFLPMPLAIFDPDMSHLNQVLAFVLPTTAHLVIGNLVEPGLFGESFELSPVVVLLSLAFWGSLWGIPGMILAVPMVVITRIVCDHLDHPYAKTLMRLLEGNVFEARED 354
BLAST of EWM20746.1 vs. NCBI_GenBank
Match: gi|612400428|ref|XP_007515733.1| (membrane protein [Bathycoccus prasinos] >gi|412994101|emb|CCO14612.1| membrane protein [Bathycoccus prasinos]) HSP 1 Score: 143.28 bits (360), Expect = 1.590e-36 Identity = 79/209 (37.80%), Postives = 120/209 (57.42%), Query Frame = 0 Query: 6 RHGDELRRYIRLKTFVCVLIAVLVGCCLSLLRVPFSGLFGLLTFVLNYIPNFGPIVATLLPLPLVVFSPDLSVTAKVLALVLPSLGHFFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLE--HPYARVAARIIEGRLFDAGLDGRNGGKPPCAG----SEGPRGYYQNRTAEETPIQPVDNNEGK 208 R ++RYI LK FV L + L V + +FG+L FV+N+IP+ GPI+AT+LPLP+V+ S D+ LA++LP + HF +G +EP+L G HL++HPI +LL L FW +LWG+ GM+L+ P+ A ++I+C+++E HP A + + IE LDG+ PP EG R Q+ ++ V G+ Sbjct: 223 RIETRIKRYILLKFFVSTLNGFIAASIYYALNVELAMVFGVLHFVMNFIPHVGPIIATVLPLPVVLVSKDIHFLHVTLAILLPGMTHFTIGNVVEPKLMGGHLDLHPITVLLCLIFWGMLWGIPGMVLAAPITASLKILCESVEVMHPLALILSGNIE-----EALDGK---APPTVAEPSIEEGVRTVVQDTMDGLHALKEVATTGGE 423
BLAST of EWM20746.1 vs. NCBI_GenBank
Match: gi|551642860|ref|XP_005824226.1| (hypothetical protein GUITHDRAFT_89764 [Guillardia theta CCMP2712] >gi|428168299|gb|EKX37246.1| hypothetical protein GUITHDRAFT_89764 [Guillardia theta CCMP2712]) HSP 1 Score: 142.51 bits (358), Expect = 3.819e-36 Identity = 74/204 (36.27%), Postives = 118/204 (57.84%), Query Frame = 0 Query: 10 ELRRYIRLKTFVCVLIAVLVGCCLSLLRVPFSGLFGLLTFVLNYIPNFGPIVATLLPLPLVVFSPDLSVTAKVLALVLPSLGHFFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLEHPYARVAARIIEGRLFDAGLDGRNGGKPPCAGSEGPRGYYQNRTAE-----ETPIQPVDNNEGK 208 +++RYI K + +++G L +L+V + +FGLL +LN+IPN G +++TLLP+P+V+F P + LA +PS H G +EPR+ G +++HP+++LLSL W LWGV GMILSVP+ A ++I Q+L+HP R A + EGR+ + G+P + S+ P ++ E + P D +E K Sbjct: 231 QVKRYIGFKVLLSTTTGIVIGISLLILKVDLALVFGLLAGLLNFIPNVGGVISTLLPMPVVIFDPSKTWLDIFLAFAIPSFVHAVTGNIIEPRVLGGAMDLHPVVVLLSLMLWGSLWGVVGMILSVPITAVIKICLQSLDHPLPRFLAGMFEGRV-------ESPGEPSFSYSQIPSSSVEHEMIEVNVVPDVARSPEDIDESK 427
BLAST of EWM20746.1 vs. NCBI_GenBank
Match: gi|950896519|ref|XP_014529052.1| (hypothetical protein JH06_1183 [Blastocystis sp. subtype 4] >gi|902863663|gb|KNB45609.1| hypothetical protein JH06_1183 [Blastocystis sp. subtype 4]) HSP 1 Score: 135.576 bits (340), Expect = 1.821e-34 Identity = 66/216 (30.56%), Postives = 124/216 (57.41%), Query Frame = 0 Query: 2 AVAHRHGDELRRYIRLKTFVCVLIAVLVGCCLSL-LRVPFSGLFGLLTFVLNYIPNFGPIVATLLPLPLVVFSPDLSVTAKVLALVLPSLGHFFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLEHPYARVAARIIEGRLFDAGLDGRNGGKPPCAGSEGPRGYYQNRTAEETPIQPVDNNEGKLQTVSTIR 216 ++ ++ +++ RY+ +KT + +L + C + L VP + +F +L F LN+IP+ GPI+AT +P+PLV+F P + +LA+ LPS+ +F + ++EP++ G+ L +HPI++++ L W+++WG G + +VPL AC++I N++HPYA++ + G + N K ++ QN T + ++ +LQ + T R Sbjct: 87 SIRYKIENQITRYLIIKTVLSLLAGTISYCIYGVFLHVPMAFIFAMLFFALNFIPHIGPIIATCIPVPLVLFDPRFTNVQIILAIALPSIMNFILQDFIEPKVLGDSLHLHPIVVIVCLVVWAIIWGSIGAVFAVPLTACVKIALHNVDHPYAKIVDAWLAGDFCCVHIHD-NDEKQEDVIAKQLTAEKQNHTIR---VAKHAEDQIQLQKIHTTR 298
BLAST of EWM20746.1 vs. NCBI_GenBank
Match: gi|325189672|emb|CCA24156.1| (transmembrane protein putative [Albugo laibachii Nc14]) HSP 1 Score: 135.961 bits (341), Expect = 8.990e-33 Identity = 80/202 (39.60%), Postives = 125/202 (61.88%), Query Frame = 0 Query: 10 ELRRYIRLKTFVCVLIAVLVGCCLSLLRVPFSGLFGLLTFVLNYIPNFGPIVATLLPLPLVVFSPD--LSVTAKVLALVLPSLGHFFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLEHPYARVAARIIEGRLFDA--GLDGRNGGKPPCAGSEGP---RGYYQN----RTAEETPIQ 200 +++R++ LK F+ + +A+LV L V + L+G+LTF+LN+IPN G +VA+L+P+ ++V +P ++ K LA++LP H FVG ++EPR+FG+ LE+ P+I++LSL+ W +LWGV GMILSVPL A +I+ +L+ VA ++EGR F + N + G E YY+N RTA E I+ Sbjct: 263 DIQRFVTLKCFLSLFVALLVTVVYVWLNVGLAILWGILTFILNWIPNVGAMVASLIPVLIIVITPSSVMNTMEKFLAVLLPMCLHAFVGNFIEPRVFGKKLEMDPVIVILSLSTWGLLWGVVGMILSVPLTAAFKIMLSHLKLWPEVVA--LMEGRYFAKYDCVSTLNDIESKSLGMEAKLDSNDYYENLGLERTATEQQIK 462
BLAST of EWM20746.1 vs. NCBI_GenBank
Match: gi|1088331744|gb|OHB81538.1| (hypothetical protein A2Z38_08875 [Planctomycetes bacterium RBG_19FT_COMBO_48_8]) HSP 1 Score: 131.724 bits (330), Expect = 1.013e-32 Identity = 61/155 (39.35%), Postives = 100/155 (64.52%), Query Frame = 0 Query: 9 DELRRYIRLKTFVCVLIAVLVGCCLSLLRVPFSGLFGLLTFVLNYIPNFGPIVATLLPLPLVVFSPDLSVTAKVLALVLPSLGHFFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLEHPYARVAARIIEGR 163 ++RY+ + +LVG L++L+V F +FG L F+LN+IP+ G ++ATLLPLP+ + P L + +KVL LV+P F +G ++P++ GE L++HP+++LLSL F+ +WG+ GM L+VP+ A ++I+ Q Y R A +I G+ Sbjct: 204 SRIKRYVLTMMLTSGITGILVGLVLTVLKVEFGWMFGFLAFLLNFIPSIGSVIATLLPLPVALIDPQLGIISKVLVLVIPGSIQFVIGNLIQPKMMGESLDLHPVVVLLSLIFFGTIWGIIGMFLAVPITAVVKILLQRFG--YTRAIADLISGK 356
BLAST of EWM20746.1 vs. NCBI_GenBank
Match: gi|575422013|gb|ETX06008.1| (hypothetical protein ETSY2_19635 [Candidatus Entotheonella sp. TSY2]) HSP 1 Score: 129.028 bits (323), Expect = 6.318e-32 Identity = 67/155 (43.23%), Postives = 97/155 (62.58%), Query Frame = 0 Query: 10 ELRRYIRLKTFVCVLIAVLVGCCLSLLRVPFSGLFGLLTFVLNYIPNFGPIVATLLPLPLVVFSPDLSVTAKVLALVLPSLGHFFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLEHPYARVAARIIEGRL 164 ++RYI KT V +VG L+ L V + +FGL F+LN+IP+ G I+ATLLPLP+V+ P+ ++T VLA+ LP L F +G +EP++ G L +HP IL+SL W ++WG+ GM L++PL A M+I + EH A I+ GRL Sbjct: 184 RIQRYIMAKTVVSAATGGIVGGLLAFLGVDLALVFGLFAFLLNFIPSIGSIIATLLPLPVVLVDPESTLTTIVLAIGLPGLSQFLIGSVIEPKVVGGTLNLHPATILISLIVWGMIWGIVGMFLAIPLTAVMQIFFERFEHTAP--IAEILAGRL 336
BLAST of EWM20746.1 vs. NCBI_GenBank
Match: gi|1088307424|gb|OHB60131.1| (hypothetical protein A2168_07520 [Planctomycetes bacterium RBG_13_50_24]) HSP 1 Score: 129.028 bits (323), Expect = 7.563e-32 Identity = 61/155 (39.35%), Postives = 100/155 (64.52%), Query Frame = 0 Query: 9 DELRRYIRLKTFVCVLIAVLVGCCLSLLRVPFSGLFGLLTFVLNYIPNFGPIVATLLPLPLVVFSPDLSVTAKVLALVLPSLGHFFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLEHPYARVAARIIEGR 163 ++RY+ F + +LVG L++L V F +FG L F+LN+IPN G I+AT+LPLP+ + P L + +K+L LV+P F +G L+P++ GE L++HP+++LLSL F+ +WG+ GM L+VP+ ++I+ Q + +A A +I G+ Sbjct: 190 SRIKRYVLTMIFTSGVTGLLVGLVLTILGVKFGWMFGFLAFLLNFIPNIGSIIATILPLPVALIDPQLGMISKILVLVIPGGIQFVIGNLLQPKMMGESLDLHPVVVLLSLIFFGTIWGIIGMFLAVPITGVVKILLQRFGYTHA--IADLIAGK 342
BLAST of EWM20746.1 vs. NCBI_GenBank
Match: gi|1179912793|ref|WP_083435148.1| (AI-2E family transporter [Rhodopirellula islandica] >gi|831418114|gb|KLU02067.1| transport facilitation [Rhodopirellula islandica]) HSP 1 Score: 129.798 bits (325), Expect = 7.922e-32 Identity = 62/162 (38.27%), Postives = 101/162 (62.35%), Query Frame = 0 Query: 3 VAHRHGDELRRYIRLKTFVCVLIAVLVGCCLSLLRVPFSGLFGLLTFVLNYIPNFGPIVATLLPLPLVVFSPDLSVTAKVLALVLPSLGHFFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLEHPYARVAARIIEGRL 164 +A++ ++R Y+ +KT + + ++ G L L VP + FGLL F+LNYIPN GPI+A++LPLP ++ PD S+T + A+ + G LEP+L G ++HP++ILL+L FW LWG++GM L+ P+ A ++I ++ R A+++ GRL Sbjct: 214 LAYQVNRQVRSYLFVKTMISLATGIVFGMALWLFGVPMALTFGLLAFLLNYIPNIGPILASILPLPFILLHPDGSLTWMITAIAVTCSIQVASGNLLEPKLMGNSADLHPVVILLALMFWGTLWGITGMFLATPITAAIKIALDRMD--VTRPVAQVMAGRL 373 The following BLAST results are available for this feature:
BLAST of EWM20746.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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