rna9955, rna9955 (mRNA) Nannochloropsis gaditana

Overview
Namerna9955
Unique Namerna9955
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length798
Alignment locationKK037258.1:94550..95638 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101375g1.2121.mrna
Orig protein idgnl|cribi|Naga_101375g1.2121
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037258.1supercontigKK037258.1:94550..95638 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101375g1gene9657Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9955rna9955-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20749.1cds9924Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9955 ID=rna9955|Name=rna9955|organism=Nannochloropsis gaditana|type=mRNA|length=798bp
ATGTTCATTCCACCGCCTTATCTTCTTTGCCCTGTCGTGGACGTGTGCCA
GACCTTGACCGAGGAGAAGATTCCCTTCTGCATCGCCACGACCAGTCCCA
AACCTCGCGTGCCCATCTCCGTGAAGGCGGCGAAGCTCGACGCTTACTTT
CCTCCCGAGAAGATTCACTCGGGCGAATCCGACTTTGATCCCCCTCGCTT
CAAACCCGCCCCTGACGTGTACTTGAAGGCAGCCGCGGCTGAAAATTGCG
CGCCTGGAGATTGTGTGGCCGTGGAAGACTCAGGCTCCGGTGTTGGCTCG
GCGGCCAACGCAGGTATGGGGCTCATCTTAGGGTATGTCGGAGGGAGCCA
CATTCCCGCCGATAAGAAGGCCTCCCACGCGGAGATGCTCATGTCGGGAG
GCAAGAGCGAGGACGGTCGAGGCGCGTTGCTTGTGGTGGAGGAATTCCGC
AACCTTGCCTCTTTGATCCGAGTATACAAGCAGGATCAGGAGACAGAAAA
TGGGGGACAGGGAAAAGCTGGGTCGTACAGCTTCTCGGACGATGTGATCC
AAAAGTTGCAAGGACGGGTTTGGCTGCCGGGACGACATAGGATTTTAAAA
TTTTCAAATTGTGATGTTGTTTCTTTGACTATCCTAGTGAGGCAGATTGA
GCTTTTCTTCTTCAAGAAAATATTAGCTCGAGGTGTCGAAGATGGTACCC
CAAAAAAACATCTGAAAGGTTGCGCAAGGAATGATAAAATTAGAGACGTG
GGACATGGAAATGATGCTATCTGCGAAACTTTCTTAAACTTTCTTTAA
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protein sequence of rna9955

>rna9955-protein ID=rna9955-protein|Name=rna9955|organism=Nannochloropsis gaditana|type=polypeptide|length=82bp
MFVRSLLLLPRTATTEEGDRLSVLSCVGISLMLSSLGKAPSISLFVTVAR
VVALCIFTASCNGFWVGRFPPTAPLSRRSFFR
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mRNA from alignment at KK037258.1:94550..95638-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9955 ID=rna9955|Name=rna9955|organism=Nannochloropsis gaditana|type=mRNA|length=1089bp|location=Sequence derived from alignment at KK037258.1:94550..95638- (Nannochloropsis gaditana)
ATGTTTGGTGCGTTCGCCCTTTGTAACTGTGAGGGAAACGCATGCGCTAT
ATTCCAGATTTAAAGACGCCATAATGTCGACACGCAAGGCGCTAAAATTC
TAAGCATGCCATCAATGTCATTTTGAGACCGAATCAAAGAGTTCGTCGCG
AGATATGGTCATGTAGGTTTGTTCTTGTCACGATGTTGGCGTCCGCAAAA
AGATCAGCGAACTTCGTACACGTGCGGGAGCCAAGTCGTCCGCTTAGGAT
TCGCAAGCCACGTTTTGAAGGCGTGAATTTATGTTGCATGTGTGGTATAC
GTGGAAGTGTGCCGTAGTAGAGACTACCTTTGACTCGTAAAACACTAACG
TGTGGTTTTGGAGGTATTTTTTGGAAAGTCGTCAGGCTTCTTGTTCCTCG
TGTAGGACCCTGCTACCGAAACGAAGGCTCGCTCCCTACATCTGTGGTAA
ATTTTGAGTAAAGCACATTTGTGCGACGACACTTTTTCAGTCTCTTCCGC
ACACTGCGTGTTGTGCGATGAACTCCACGTAATAAATGCAATTTGGCACT
GGATCCAAGCTTTGCTCCTTCTTGCCCGACGGCGCCCGGATGATGAAGCG
GAGATGAGACGCATTAGTCGTTGGAGTTAAAATTGTTCGTTAAGCGCTTT
TTTGCACTCTCGTCTTCATTTGCGGATCCTAAGAGTCTTTAAATTCAGAT
CATAAGAGGAAGTACCAATGGCAGCGCGATGACTTAAAGTCATACCCGCC
CTCCTCATCTTTTGCTTCCACAGGGCACTTGCTCCCCTATCCCTTGAACG
AGTCTGTCTCCTCATTAATCCCTCTTCGTCCCCCCCTATTCGCACAGTTC
GATCTCTGCTCTTGTTGCCAAGGACAGCAACTACCGAGGAAGGTGATCGA
CTCTCCGTCTTATCCTGTGTTGGAATTTCTTTGATGCTGTCAAGCCTCGG
GAAAGCTCCTTCTATTTCGCTTTTTGTGACCGTCGCGCGTGTGGTTGCTC
TGTGCATTTTCACCGCCTCGTGCAACGGTTTTTGGGTCGGGCGTTTTCCT
CCCACTGCACCTCTCTCTCGTCGTTCGTTCTTTCGGTGA
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Coding sequence (CDS) from alignment at KK037258.1:94550..95638-

>rna9955 ID=rna9955|Name=rna9955|organism=Nannochloropsis gaditana|type=CDS|length=498bp|location=Sequence derived from alignment at KK037258.1:94550..95638- (Nannochloropsis gaditana)
TTCGATCTCTGCTCTTGTTGCCAAGGACAGCAACTACCGAGGAAGGTGAT
CGACTCTCCGTCTTATCCTGTGTTGGAATTTCTTTGATGCTGTCAAGCCT
CGGGAAAGCTCCTTCTATTTCGCTTTTTGTGACCGTCGCGCGTGTGGTTG
CTCTGTGCATTTTCACCGCCTCGTGCAACGGTTTTTGGGTCGGGCGTTTT
CCTCCCACTGCACCTCTCTCTCGTCGTTCGTTCTTTCGGTGAATGTTTGT
TCGATCTCTGCTCTTGTTGCCAAGGACAGCAACTACCGAGGAAGGTGATC
GACTCTCCGTCTTATCCTGTGTTGGAATTTCTTTGATGCTGTCAAGCCTC
GGGAAAGCTCCTTCTATTTCGCTTTTTGTGACCGTCGCGCGTGTGGTTGC
TCTGTGCATTTTCACCGCCTCGTGCAACGGTTTTTGGGTCGGGCGTTTTC
CTCCCACTGCACCTCTCTCTCGTCGTTCGTTCTTTCGGTGAATGTTTG
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Synonyms
Publications