EWM20749.1, cds9924 (CDS) Nannochloropsis gaditana

Overview
NameEWM20749.1
Unique Namecds9924
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037258.1:95632..95638 -
Alignment locationKK037258.1:94550..94791 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20749.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101375g1.2121.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037258.1supercontigKK037258.1:95632..95638 -
KK037258.1supercontigKK037258.1:94550..94791 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20749.1 vs. NCBI_GenBank
Match: gi|585100614|gb|EWM20749.1| (hypothetical protein Naga_101375g1 [Nannochloropsis gaditana])

HSP 1 Score: 160.229 bits (404), Expect = 8.923e-50
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 
Query:    1 MFVRSLLLLPRTATTEEGDRLSVLSCVGISLMLSSLGKAPSISLFVTVARVVALCIFTASCNGFWVGRFPPTAPLSRRSFFR 82
            MFVRSLLLLPRTATTEEGDRLSVLSCVGISLMLSSLGKAPSISLFVTVARVVALCIFTASCNGFWVGRFPPTAPLSRRSFFR
Sbjct:    1 MFVRSLLLLPRTATTEEGDRLSVLSCVGISLMLSSLGKAPSISLFVTVARVVALCIFTASCNGFWVGRFPPTAPLSRRSFFR 82
The following BLAST results are available for this feature:
BLAST of EWM20749.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100614|gb|EWM20749.1|8.923e-50100.00hypothetical protein Naga_101375g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9955rna9955Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications