rna9951, rna9951 (mRNA) Nannochloropsis gaditana

Overview
Namerna9951
Unique Namerna9951
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1303
Alignment locationKK037258.1:76905..78643 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101746g2.8993.mrna
Orig protein idgnl|cribi|Naga_101746g2.8993
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037258.1supercontigKK037258.1:76905..78643 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101746g2gene9653Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9951rna9951-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20753.1cds9920Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9951 ID=rna9951|Name=rna9951|organism=Nannochloropsis gaditana|type=mRNA|length=1303bp
GACGACAGAGATCAGGAAGCTCAATAGTAGTCATCGTGCCCCACGTACCC
TGGCGTCTTGGCCAGTACCGGCACGCACACACGCGTCCTGGCGAGACGCG
GGATTGTGTACATGTTCTTGTATGGTGTGCGAGGGTACATGGGTGGGAAT
GTTGGGAAATTGAAGGCAGAAGTCAAAGGGTTGTGGATCTCTGCGTCGCC
CGCCCCTGTTGAGGGTGCGAAGATTTCAACTCCTCCCATGTTCCAGTCAA
CCCACAGATACGTGTCCATGGTCGTCTTCATGTATGAATACAGGGTTTGT
GTCGCACTCTGTGCCACTCAGACGTCTCTTGGAGGGAAGGGTAGCGCGCA
TCTGTACCTCGCAAGTCTCCACTCCCTTGCCCTCATACGTGTTGTGACAC
GTCCCTGATTCCATTCTTTTCTCCGTTTCTCGCGTTTCTCATTCCCTGTA
ACTTGTGTCCCACACCCTCTGATGGTGCCCTTCTCCTCGATATGGTGTCC
ACGCGATTGCCTCGTTGTGTTTTCCGTGTGCGTGTGTACTGGCATATCGG
TGGCAGGCTCGCTGAATTGATAAGATCAAGGCAACAGGAGAGTGATCCCT
TCCCACGTGTCCTCCACTCCCCATGCTATAAATCTCAACTCACCACTCAC
CAATGTCGATTACCGTCACTGTCCTTCTCTTTCTTATTTGTTCGGATGTG
CTCCATTGTTGCCCCCAATGTTTTCGTAGCTTCTCCTCGGAGCCCAACAG
ACAGGCCTGGGATTCACCGCTTTCGGTTTTTTCTGCTCGAGCTCTCATAC
TTCATCTTGTCCTTTCTCCTTACCACAGAGCACGCGTATTAGGATACTTA
CGTAAGAAGCGTGTCCTTTTCGTCTCGAATTAAAGGTCACACGTTTTTTG
GTACGCAGACGCGTTGATAGAAATCGTTTTTGCGCCTCGGGATCCCAACC
TGGAAACCGACCTGCAAAGGCTTATTTAACAGCACAAAAAGCTTGGTCGG
AGAGCCAAACACGGAGCGACTGGTTCACTGCTATCATCAGCCTCCGTCTT
AATTGAAAAAGGAACGACCCTGCTGTAGTGCCGCTAGAAAACTGCACAGA
GGCGCCAACATACATTGAACCGGTCAATAGACTCTAAGGGCACCTTTCCT
TTTGCGTCGTCGATTGACAATAGAGTCGAGGCCTTAGACTTGCAGCTGGA
TTAGTGCGATGGCGTACTCATCATCGGCCCCTGCGTCGTCCTCCATGTCG
GCGCATTCCCCTTCCAAGCGACGTGACATGGACTTGATGAAGCTGTAAGG
AGG
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protein sequence of rna9951

>rna9951-protein ID=rna9951-protein|Name=rna9951|organism=Nannochloropsis gaditana|type=polypeptide|length=115bp
MLEECSGGILLTESRRACEHGMRFLPLSLPSCLLSSFPALITFYRPSSLP
FLVPPFIRLRAAVRVGRALSRRGRQGGKERARAGSREAHTELASAFCRSA
TTASAPRQTTLIVLV
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mRNA from alignment at KK037258.1:76905..78643+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9951 ID=rna9951|Name=rna9951|organism=Nannochloropsis gaditana|type=mRNA|length=1739bp|location=Sequence derived from alignment at KK037258.1:76905..78643+ (Nannochloropsis gaditana)
tccctcctgtgccCCTCAGCATGATGAGTGACTTCCACGTCCACATCCCA
GACGACAGCCGCCTGCACGAGTTCTGCGTCGTCTTTCATGGACCGCCCGA
AAGTacgtctcctttccctccctccctccctcccttccttccttccttcc
ttccttccttccttaattcctccctttctcctcctctttcctagATCCTC
GTCTTTTTGACTTAACGACACCATCCATTGTATCGTCATTCCCTCATAAA
GTCCACCCCTGCCTCTGCCTTTGTCTgtctcccttcgtccctctctccct
ccctccctccttccttccctcagcGCCCTACCATGGTGGCCAGTGGAAGG
TCCATGTCACCCTTCCACTCGATTATCCTTTCAAATCTCCGTCCATTGGG
TTCAGCAAccgccttttccatcccaATGTGGACGAGATGTAAGTCCTTTC
cggccctttttccctcgaTTGATCTCTCTATCCTGCTTCTGCCTTGGGCT
TCCTACTTTTCCCTCGTgtctcctcactctcctccttctgccttgGGCTT
CATTGCTCTTCCCTCGATAGATCTCActctcctttttctgccTTGGGCTT
CCTACTTTTTCCTCGCTTGttttctctccttccatcccgccTTGCCTGGG
CGCGATCTTTCTCAGTGGTCGTGTTGCTCACCTTAACTTTGTGTCCGCCT
CTTTCAACGCCTTTTGTCCTCCATCGATAGGTCCGGTTCTGTCTGCTTGG
ATGTCATAAATCAAGCCTGGACCCCGATGTACGGTGAGTGTcaaaggtgg
gagggagggagggagggaaggagcgagagggggagagggaagaatgcTAG
TCAGGCTCCACATCGGTGGGCAACTGattgtctcctcttccttctccctc
cactcctacACGTCCTTGCTACGTCTATcccacttttcctccttctccat
cccccttttcctcgctcgctgcctcctcgcaTCCTCCCTTCAGACCTGGT
CAACGTGTTCGAGACCTTCCTGCCTCAGCTCCTGCGCTATCCCAACCCCA
GTGATCCACTCAACGCGGACGGTGAgataaagagggagggagggaaggaa
ggaggtagggaaaaAGACCAGATAGTGAGGGGTCACAGGCCGCGCCGCGA
ACCGAAATACCTACCTCGAGCACTTCtgatcccccctccctcccttcctc
cccactttcctccctccttccctcgtctttAGCGGCCAACCTTCTGCTGC
GTGATCCAGAGGGATACCATGCCCGGGTTCACGGTAAGGTgacgagaggg
ggagggagcggagggacAAAGGACTGAAGGAAGAATAATTTTttcggtgg
gagaggagaaagagggcaagaaggacgAACGAAAAGGATGGAATGTTGGA
GGAATGCTCCGGAGGAATCCTTCTCACAGAGTCTCGGCGCGCTTGTGAGC
ATGGAAtgcgctttcttcccctttcccttccatctTGCCTCTTGtcatcc
ttccctgctttGATTACATTTTATCGcccgtcctcgcttcctttccttgt
gcCCCCCTTTATCAGATTACGTGCGGCGGTACGCGTCGGTCGCGCTCTTT
Ctcgacgaggaagacaaggcgggaaggagcgagcgagagcgggaagcagg
gaggcccACACAGAGCTCGCCAGCGCCTTCTGCAGGAGTGCCACGACAGC
ATCCGCACCGAGGCAGACAACCCTCATTGTCCTCGTCAG
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Coding sequence (CDS) from alignment at KK037258.1:76905..78643+

>rna9951 ID=rna9951|Name=rna9951|organism=Nannochloropsis gaditana|type=CDS|length=347bp|location=Sequence derived from alignment at KK037258.1:76905..78643+ (Nannochloropsis gaditana)
ATGTTGGAGGAATGCTCCGGAGGAATCCTTCTCACAGAGTCTCGGCGCGC
TTGTGAGCATGGAAtgcgctttcttcccctttcccttccatctTGCCTCT
TGtcatccttccctgctttGATTACATTTTATCGcccgtcctcgcttcct
ttccttgtgcCCCCCTTTATCAGATTACGTGCGGCGGTACGCGTCGGTCG
CGCTCTTTCtcgacgaggaagacaaggcgggaaggagcgagcgagagcgg
gaagcagggaggcccACACAGAGCTCGCCAGCGCCTTCTGCAGGAGTGCC
ACGACAGCATCCGCACCGAGGCAGACAACCCTCATTGTCCTCGTCAG
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Synonyms
Publications