EWM20753.1, cds9920 (CDS) Nannochloropsis gaditana

Overview
NameEWM20753.1
Unique Namecds9920
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037258.1:78297..78643 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20753.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101746g2.8993.mrna
GbkeyCDS
End range.
End range78643
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037258.1supercontigKK037258.1:78297..78643 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20753.1 vs. NCBI_GenBank
Match: gi|585100622|gb|EWM20753.1| (hypothetical protein Naga_101746g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 223.402 bits (568), Expect = 8.755e-74
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 
Query:    1 MLEECSGGILLTESRRACEHGMRFLPLSLPSCLLSSFPALITFYRPSSLPFLVPPFIRLRAAVRVGRALSRRGRQGGKERARAGSREAHTELASAFCRSATTASAPRQTTLIVLV 115
            MLEECSGGILLTESRRACEHGMRFLPLSLPSCLLSSFPALITFYRPSSLPFLVPPFIRLRAAVRVGRALSRRGRQGGKERARAGSREAHTELASAFCRSATTASAPRQTTLIVLV
Sbjct:    1 MLEECSGGILLTESRRACEHGMRFLPLSLPSCLLSSFPALITFYRPSSLPFLVPPFIRLRAAVRVGRALSRRGRQGGKERARAGSREAHTELASAFCRSATTASAPRQTTLIVLV 115
The following BLAST results are available for this feature:
BLAST of EWM20753.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100622|gb|EWM20753.1|8.755e-74100.00hypothetical protein Naga_101746g2, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9951rna9951Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications