rna9945, rna9945 (mRNA) Nannochloropsis gaditana

Overview
Namerna9945
Unique Namerna9945
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length498
Alignment locationKK037258.1:61436..63164 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100518g2.7414.mrna
Orig protein idgnl|cribi|Naga_100518g2.7414
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037258.1supercontigKK037258.1:61436..63164 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100518g2gene9648Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20757.1cds9914Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9945rna9945-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9945 ID=rna9945|Name=rna9945|organism=Nannochloropsis gaditana|type=mRNA|length=498bp
TATCTCTCCCACCAATTTACTTTAGATCGAAGTGGCTGCGAGAAACATCG
GTCGGCTACAGCTCGACATACACCCAATCGGGTCTGTTTCAGGGGAGATA
GGACCATAACGTTTCTTCCCCTAATTTCACAGAGGAATGTGCTACGTTGA
GAAATCTCATAAAAGCGAGGCCGCTGCATCCTCTCCTGCTGGCCCCGTTT
TGCGCTCCCACTCAGCTGCCACAGCCGAGAGAAAGCGACAGGAGGAAAAA
CGCCGTCTGCATCCGCAGCACTTGGGGTTGGGCGAGGAAACACATGAATT
GAATAGAAAAGGGCATGGGAGAAGGGTAACGGGGGCTGGATATGGAAGGA
GTCCAGGGGGAAGAGGGGAGGAGGTGGACCAGGACAGAGGAGTGGAGCCT
GGAAAAGAGGAAAAAAGCACCTCCTTCATGGTACAAGGCAAGGTAGGGCA
TTCAATATCTTTTGCTGAGTGTGGGAATGCAGGTGTTTAGGCCGCTGG
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protein sequence of rna9945

>rna9945-protein ID=rna9945-protein|Name=rna9945|organism=Nannochloropsis gaditana|type=polypeptide|length=327bp
MDHVLRTVGWFVRTPEVPKDGAKLCTIALSHYCEKARWALDLSPLRDTYI
EDAHAPVFHYRPTVALTKDRKKTGLPVLVLPGVDPEGPPTVVQDSAEILQ
HLASLYPKELGHMYPPGDMGDKVRALERKLGEQLGPATRKIVYWEMWQGR
QEGIDTCNALLERHYPTAEARMWRLLEAKILPVMLKAMKIDETSTLAALE
ESREIFREVSALLDSEEGGKGGGAPAGPRRYLLGANRMTAADLTFAALAY
PLINPPAFASLGLSGAEASPWAKRLAVITKEFRATPAGQHVLRLYGEERF
PETSMAGKEPTGQLCLRTSNRDKWPWQ
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mRNA from alignment at KK037258.1:61436..63164-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9945 ID=rna9945|Name=rna9945|organism=Nannochloropsis gaditana|type=mRNA|length=1729bp|location=Sequence derived from alignment at KK037258.1:61436..63164- (Nannochloropsis gaditana)
ATACGTCACTGCGAAGGGCAAGTGAGAAAAATTGCGCGAAACAGAAGAAC
GGCCCAAGCCTTGGGCGGCCAAAGGGGGGAGAAATTGCGCGAAACCGTGA
GAAAAGGAAACCTCAGGACAAAGACATAGCGACGAGCGCAACACGCAATA
TGTGAACAATTTTTGGGGAGAAACGCCGGCCGAATGTGTTCATGAATACA
ATCCATGAGTATAAGTCAGTAGAAATCTCTGTGGCAAAACACCCCATTCT
TTGATGCATGGACGAACTGGATCTCATCAATCCCTGAAAACTAATCTCGA
CCCCTTTTATTCCTGGAGTAGCCACAAGGATGGACCACGTACTGCGAACA
GTGGGATGGTTCGTACGTACACCCGAAGTACCGAAAGACGGCGCTAAACT
CTGCACGATTGCTCTCTCCCATTACTGTGAGAAAGCTCGTTGGGCCTTGG
ACTTGTCGCCCCTACGCGACACGTACATCGAAGACGCCCATGCCCCTGTC
TTCCATTATCGACCAACGGTCGCCTTAACCAAGGACCGGAAGAAAACAGG
CTTGCCTGTCCTGGTGCTTCCCGGAGTGGACCCTGAGGGCCCGCCTACTG
TTGTTCAGGACTCTGCTGAGATCCTCCAGCACCTTGCCTCCCTGTATCCG
AAGGAGCTGGGGCACATGTACCCTCCTGGAGATATGGGGGACAAGGTACG
GGCGTTGGAGAGGAAGCTGGGAGAGCAGCTGGGGCCTGCGACGCGTAAAA
TCGTGTATTGGGAAATGTGGCAAGGACGACAGGAGGGAATTGATACCTGC
AACGCACTGTTGGAAAGGCATTATCCCACGGCCGAGGCGCGAATGTGGCG
GCTATTGGAAGCCAAGATCCTCCCAGTCATGCTTAAAGCGATGAAAATCG
ATGAAACCTCGACTCTCGCGGCGTTGGAAGAGTCTCGTGAGATTTTCCGG
GAAGTTTCGGCATTACTGGACAGCGAGGAAGGAGGGAAGGGCGGGGGAGC
TCCCGCAGGCCCGCGAAGATACCTGTTGGGGGCAAATCGGATGACAGCAG
CGGATTTGACGTTTGCTGCTTTGGCGTACCCACTGATAAATCCTCCCGCC
TTCGCCTCCTTAGGTTTGTCGGGAGCAGAGGCCTCCCCCTGGGCCAAAAG
GTTAGCCGTCATCACAAAAGAATTTCGGGCTACCCCAGCAGGTCAACATG
TCTTGAGGTTGTATGGGGAGGAACGGTTTCCAGAAACCTCTATGGCGGGA
AAAGAGCCGACGGGTCAGCTTTGCCTTCGGACGTCAAACCGAGACAAGTG
GCCCTGGCAGTGAAACAGGGGCACTTACCGGGGTGTTGGGATCATTCGAG
CATAGATCCCGAGTTAAAGACTTTTCGGCGTGTAAGTCTTCTTGAGCATG
TATAAATCTCTTTGTTTTTGAGAGATGATTATATACACCGATCGATCTTT
CAGCTAGAAAACAGATGATTGTCAACACTAGTCTACGAGCTTTGAAGCAA
GAAAGCAATTTGTGACTCTTGAAGGGCATTTACGACTTAATTTGATACAT
TAATTTTGGTGTATTGGGTACGAAAACTGTGCATGCGTGACCTCCGCGAG
GGACTAAAAAGCAATCGACTTCCTGAAGAACTCACTCCCAAAGACGTGAA
GAACGCTTGAAGCCTTCTGCATTGTCAAGAAAGCTACTTCCTTTGTAGAG
AACGACTTGTTTTAAGGTTTGTAATTATC
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Coding sequence (CDS) from alignment at KK037258.1:61436..63164-

>rna9945 ID=rna9945|Name=rna9945|organism=Nannochloropsis gaditana|type=CDS|length=984bp|location=Sequence derived from alignment at KK037258.1:61436..63164- (Nannochloropsis gaditana)
ATGGACCACGTACTGCGAACAGTGGGATGGTTCGTACGTACACCCGAAGT
ACCGAAAGACGGCGCTAAACTCTGCACGATTGCTCTCTCCCATTACTGTG
AGAAAGCTCGTTGGGCCTTGGACTTGTCGCCCCTACGCGACACGTACATC
GAAGACGCCCATGCCCCTGTCTTCCATTATCGACCAACGGTCGCCTTAAC
CAAGGACCGGAAGAAAACAGGCTTGCCTGTCCTGGTGCTTCCCGGAGTGG
ACCCTGAGGGCCCGCCTACTGTTGTTCAGGACTCTGCTGAGATCCTCCAG
CACCTTGCCTCCCTGTATCCGAAGGAGCTGGGGCACATGTACCCTCCTGG
AGATATGGGGGACAAGGTACGGGCGTTGGAGAGGAAGCTGGGAGAGCAGC
TGGGGCCTGCGACGCGTAAAATCGTGTATTGGGAAATGTGGCAAGGACGA
CAGGAGGGAATTGATACCTGCAACGCACTGTTGGAAAGGCATTATCCCAC
GGCCGAGGCGCGAATGTGGCGGCTATTGGAAGCCAAGATCCTCCCAGTCA
TGCTTAAAGCGATGAAAATCGATGAAACCTCGACTCTCGCGGCGTTGGAA
GAGTCTCGTGAGATTTTCCGGGAAGTTTCGGCATTACTGGACAGCGAGGA
AGGAGGGAAGGGCGGGGGAGCTCCCGCAGGCCCGCGAAGATACCTGTTGG
GGGCAAATCGGATGACAGCAGCGGATTTGACGTTTGCTGCTTTGGCGTAC
CCACTGATAAATCCTCCCGCCTTCGCCTCCTTAGGTTTGTCGGGAGCAGA
GGCCTCCCCCTGGGCCAAAAGGTTAGCCGTCATCACAAAAGAATTTCGGG
CTACCCCAGCAGGTCAACATGTCTTGAGGTTGTATGGGGAGGAACGGTTT
CCAGAAACCTCTATGGCGGGAAAAGAGCCGACGGGTCAGCTTTGCCTTCG
GACGTCAAACCGAGACAAGTGGCCCTGGCAGTGA
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Synonyms
Publications