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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100405g3.2128.mrna |
| Orig protein id | gnl|cribi|Naga_100405g3.2128 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037258.1 | supercontig | KK037258.1:42599..44738 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9941 ID=rna9941|Name=rna9941|organism=Nannochloropsis gaditana|type=mRNA|length=1127bp
GAGAACTTCCGAGGAGGAAGGAAATGGGCGAGTACCCGGTGTTCCTACGC
GTGGGCGGCGCAAATAGGAACGCAAGCATGAACAAGCCTGCAGGCAAGCA
ACTACCACAACACTAAATTTTGCCACTGTAGTTATCGGACAAATCCTATG
GTGGCTCGCCTTTCTTCCTGTAAAGAGACGATGCTCAAGGCAACAATCCA
CAGTGCTAATGGGCCCCGCCCCGTTCCCCTCCTGCGGGTGGGCCCAAAAT
ACTCACGAATTTGACTAAATTGTACCCAAACCCTCCCAACCCGCCACATT
ATGAAGACAGTGGTAAACTTTTTACATCTACAAAGATACCACCGTGGTGC
TGCCATGACCATATTTCCTGCGTGGCCTAACCAAGAGACCAGAACATGGT
CAGTTTGGAGCTTAGCTGCGGGTTTGCTCATTGTCGCCCTGGCATCCTCC
CTTTTGGCTGTGATGGACCCCTCCGCGCTCATCCTCACGAGGCACATGAA
GGACGGCGGCAGCGGCTCGGGAACCTCGACCCCATTCTTGCTTCGTCATC
AAGAGCCCCGCTATGCCCCCCTTCGTGTCCCCGACGCGCACCTCCCCGAG
ACGGACCCAAGGCGGCGGAAGAAGAGCGAGGGAGGGAAGAAGGGCGGGCA
GTCCCACGAGAAGGAAGTCTCCAACAACGCGTGGGGCCCCGAAGCAGCCG
GGGCGCTCAATGGCACTGTCGATGGGAGCAGAGGGAGCGACGCCAGCAGC
CTCGAGGACAGTGCAGAGCTGCCCCCGCTCCCCTCCCTGGGCCCCCCCGC
CCCGTCCTCCTTCCTGCCTCCCTGCAGCTACTCCATCCTCCAAGCAGCCC
CGGACTCGGTGAAGTGGACCGTGGCAGCGACGAAGGGCGGGAGGGCGGGA
GGGAAGGAGGGCGAGGCAGACGGCATGACGTACACCCCCCGCCATGCTCT
CTGCGTCCTGCGCGGGTTCGACGGCTTGACAAGCGGGAAAGGGGAGGGAG
GGGCAAAGGGAGGGGGAGAGGGCGGGGAGGAGGCGTACGCATGCTTACGT
GGGAAGCATTTGGTTTTCATGGGAGACAGCTTGTCACGGTATCAGTACTT
GAGCCTGATCAGATACCTGGAGGAAGG back to topprotein sequence of rna9941 >rna9941-protein ID=rna9941-protein|Name=rna9941|organism=Nannochloropsis gaditana|type=polypeptide|length=226bp
MHPYIPLFSPPFFSCPLLSQTLTFKGASRLKETWNDFYRRSSAFFGVREV
CDCYREEGKAPHVENRYYVNEEKDLRVSFIGWFGNHPPRGHAIPASAPLT
QDALGCAPGACQGPVNWEAPVSSLLQGSFLRATVRPTHLFLNAGLWGPIS
GAVLSDVVEAAKNLSTSEHVDVFWKTTTSRSEKASTVRKEGGKTLLTRGG
GMKGRRRGQRRAPCFPVRELLYELHL back to topmRNA from alignment at KK037258.1:42599..44738+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9941 ID=rna9941|Name=rna9941|organism=Nannochloropsis gaditana|type=mRNA|length=2140bp|location=Sequence derived from alignment at KK037258.1:42599..44738+ (Nannochloropsis gaditana)
CGTGCACGCGATCACAGCCTGGTTCCATGCATCCTTAtattcccctcttc
tccccccctttcttttcctgccctctcctctcccagacACTCACCTTCAA
GGGGGCCTCGAGATTGAAAGAGACGTGGAACGATTTCTACCGCCGGTCGT
CGGCATTTTTCGGCGTTCGTGAGGTCTGCGACTGCTACAGGTAgattgcc
ccccccccctgttcCTTTTTagttcctctccctccctttttctttccctc
ctagGGACGCGTCtcacctgcctcctcccttttcccttccctcctccctc
cttccctccctcctttcccctctacctcctgcagagaggaaggcaaagca
CCGCACGTGGAGAATCGATATTATGtcaacgaggagaaggacctcCGTGT
CTCTTTTATAGGCTGGTTCGGGAATCATCCACCGCGGTaggtccccctcc
ctccctccctctcttcgtactccctccctcccttcctgtcgtCATTTTTC
GTGGGATCCTCCAGGTTTATCCACCTTGCATCACGCATCACACCCCTACC
TCGCACCactcaccccttcctcccctcccttcccttcctatTCAGAGGGC
ACGccatccccgcctcggcTCCGCTCACGCAGGACGCTCTTGGTTGCGCC
CCGGGAGCCTGTCAGGGTCCCGTCAACTGGGAAGCGccagtctcctccct
cctccaaggtccgtcctcctctccttatTTCTgtggctttctttctttgc
gTTTCTCTCCActttttgccctccttccacccgcTCCTACGATCCTAGGA
GCCGacccgccccctttcctctctcgtATACCTGTCGCCTCGCActcatt
cccctcccttccctccctctcttcactCACCAGGCTCCTTCCTACGTGCC
ACGGTCCGCCCGAcgcacctcttcctcaacgCGGGCCTGTGGGGCCCGAT
CAGCGGAGCCGTGCTCAGGTAGGGGAGTGACGTTGCAGAGTAGTATATAT
AGGGAGAGAGCGAGTAAATGTACAAAGACATGGGGAATGCGCGCATGGAT
GAGGCTAGACGTGCGTTGTGAGGGTACCCTggtttcccttccctcctttc
gagCCTTTTCCCCTGTTCACAaggaacctcctcccccctttcctccctct
cagtGACGTGGTCGAGGCTGCCAAGAATTTGTCCACTTCCGAGCACGTGG
ACGTGTTTTGGAAGACAACCACGAGTCGGAGTGAGAAAGCGTCGACggta
aggaaggaaggagggaaaacgcTTCTCacacggggaggagggatgaaggg
gcggcggaggggacaGCGCAGGGCACCATGTTTCCCTGTCAGAGAGCTCT
TGTACGAGCTTCATTTGTAATTCTTCTGACTTGTTCTTCCgtgctgcctc
ctctcttcgcctctcccacccacttgcctccccttcccctctcctcgctt
cccttatccctccccctcgccctccgacACAGGTGGATGACACGGCAGCG
CGCCAGGCCTTTATCACCCACGGTCTCAAAGTATGTGTTACCCTTTACTC
GCCTTCTCTTGCTTATCTATCGCTTTCCCTTCaccaccctccaccccctt
cgtctccacCTTTTGTCTTACTatccgccctcctttgcttttGGATCGGT
ATTTCTATCGCTCTCGCAGCATCTTGagcttcttctcttcctcattccct
tccttccctcctgcctaGGTCTTTGACAGCGGACTTTTTACCAACAGCCT
CcggtccttcctccctgcgtACAAGGATGGCACCACTCACTATGTCTCTT
CTGTCTATACGGGCTTGAACATCCTTCTTTTGAATGAAATATGCTGAGTA
CTTCAAAATAAATCGAGGTAGACAGTATGCGACGTTAAGAGGGAGTCCAG
CAAGACAGGGAAGCTAAGCTTAGTGAGAGCCAAAGGTCGAGGGGAAATGC
ATGTTGTACGATAGCTAGTAGAAAAAAGAATCCAAAGCAAAGAAACACCA
AGAAAATGGGTTTGGATAAAATACTGGCACGAACATGTTGAtgttctctt
tctttctcttgtATCAAGTCactgaaaaaaaaaagaaacagAACCCTCGC
TTACGGAAAAATCAAAGATTCGGGCTCCTCGATCAGGTCC back to topCoding sequence (CDS) from alignment at KK037258.1:42599..44738+ >rna9941 ID=rna9941|Name=rna9941|organism=Nannochloropsis gaditana|type=CDS|length=3405bp|location=Sequence derived from alignment at KK037258.1:42599..44738+ (Nannochloropsis gaditana)
ATGCATCCTTAtattcccctcttctccccccctttcttttcctgccctct
cctctcccagacACTCACCTTCAAGGGGGCCTCGAGATTGAAAGAGACGT
GGAACGATTTCTACCGCCGGTCGTCGGCATTTTTCGGCGTTCGTGAGGTC
TGCGACTGCTACAGagaggaaggcaaagcaCCGCACGTGGAGAATCGATA
TTATGtcaacgaggagaaggacctcCGTGTCTCTTTTATAGGCTGGTTCG
GGAATCATCCACCGCGAGGGCACGccatccccgcctcggcTCCGCTCACG
CAGGACGCTCTTGGTTGCGCCCCGGGAGCCTGTCAGGGTCCCGTCAACTG
GGAAGCGccagtctcctccctcctccaagGCTCCTTCCTACGTGCCACGG
TCCGCCCGAcgcacctcttcctcaacgCGGGCCTGTGGGGCCCGATCAGC
GGAGCCGTGCTCAGtGACGTGGTCGAGGCTGCCAAGAATTTGTCCACTTC
CGAGCACGTGGACGTGTTTTGGAAGACAACCACGAGTCGGAGTGAGAAAG
CGTCGACggtaaggaaggaaggagggaaaacgcTTCTCacacggggagga
gggatgaaggggcggcggaggggacaGCGCAGGGCACCATGTTTCCCTGT
CAGAGAGCTCTTGTACGAGCTTCATTTGTAAATGCATCCTTAtattcccc
tcttctccccccctttcttttcctgccctctcctctcccagacACTCACC
TTCAAGGGGGCCTCGAGATTGAAAGAGACGTGGAACGATTTCTACCGCCG
GTCGTCGGCATTTTTCGGCGTTCGTGAGGTCTGCGACTGCTACAGagagg
aaggcaaagcaCCGCACGTGGAGAATCGATATTATGtcaacgaggagaag
gacctcCGTGTCTCTTTTATAGGCTGGTTCGGGAATCATCCACCGCGAGG
GCACGccatccccgcctcggcTCCGCTCACGCAGGACGCTCTTGGTTGCG
CCCCGGGAGCCTGTCAGGGTCCCGTCAACTGGGAAGCGccagtctcctcc
ctcctccaagGCTCCTTCCTACGTGCCACGGTCCGCCCGAcgcacctctt
cctcaacgCGGGCCTGTGGGGCCCGATCAGCGGAGCCGTGCTCAGtGACG
TGGTCGAGGCTGCCAAGAATTTGTCCACTTCCGAGCACGTGGACGTGTTT
TGGAAGACAACCACGAGTCGGAGTGAGAAAGCGTCGACggtaaggaagga
aggagggaaaacgcTTCTCacacggggaggagggatgaaggggcggcgga
ggggacaGCGCAGGGCACCATGTTTCCCTGTCAGAGAGCTCTTGTACGAG
CTTCATTTGTAAATGCATCCTTAtattcccctcttctccccccctttctt
ttcctgccctctcctctcccagacACTCACCTTCAAGGGGGCCTCGAGAT
TGAAAGAGACGTGGAACGATTTCTACCGCCGGTCGTCGGCATTTTTCGGC
GTTCGTGAGGTCTGCGACTGCTACAGagaggaaggcaaagcaCCGCACGT
GGAGAATCGATATTATGtcaacgaggagaaggacctcCGTGTCTCTTTTA
TAGGCTGGTTCGGGAATCATCCACCGCGAGGGCACGccatccccgcctcg
gcTCCGCTCACGCAGGACGCTCTTGGTTGCGCCCCGGGAGCCTGTCAGGG
TCCCGTCAACTGGGAAGCGccagtctcctccctcctccaagGCTCCTTCC
TACGTGCCACGGTCCGCCCGAcgcacctcttcctcaacgCGGGCCTGTGG
GGCCCGATCAGCGGAGCCGTGCTCAGtGACGTGGTCGAGGCTGCCAAGAA
TTTGTCCACTTCCGAGCACGTGGACGTGTTTTGGAAGACAACCACGAGTC
GGAGTGAGAAAGCGTCGACggtaaggaaggaaggagggaaaacgcTTCTC
acacggggaggagggatgaaggggcggcggaggggacaGCGCAGGGCACC
ATGTTTCCCTGTCAGAGAGCTCTTGTACGAGCTTCATTTGTAAATGCATC
CTTAtattcccctcttctccccccctttcttttcctgccctctcctctcc
cagacACTCACCTTCAAGGGGGCCTCGAGATTGAAAGAGACGTGGAACGA
TTTCTACCGCCGGTCGTCGGCATTTTTCGGCGTTCGTGAGGTCTGCGACT
GCTACAGagaggaaggcaaagcaCCGCACGTGGAGAATCGATATTATGtc
aacgaggagaaggacctcCGTGTCTCTTTTATAGGCTGGTTCGGGAATCA
TCCACCGCGAGGGCACGccatccccgcctcggcTCCGCTCACGCAGGACG
CTCTTGGTTGCGCCCCGGGAGCCTGTCAGGGTCCCGTCAACTGGGAAGCG
ccagtctcctccctcctccaagGCTCCTTCCTACGTGCCACGGTCCGCCC
GAcgcacctcttcctcaacgCGGGCCTGTGGGGCCCGATCAGCGGAGCCG
TGCTCAGtGACGTGGTCGAGGCTGCCAAGAATTTGTCCACTTCCGAGCAC
GTGGACGTGTTTTGGAAGACAACCACGAGTCGGAGTGAGAAAGCGTCGAC
ggtaaggaaggaaggagggaaaacgcTTCTCacacggggaggagggatga
aggggcggcggaggggacaGCGCAGGGCACCATGTTTCCCTGTCAGAGAG
CTCTTGTACGAGCTTCATTTGTAAATGCATCCTTAtattcccctcttctc
cccccctttcttttcctgccctctcctctcccagacACTCACCTTCAAGG
GGGCCTCGAGATTGAAAGAGACGTGGAACGATTTCTACCGCCGGTCGTCG
GCATTTTTCGGCGTTCGTGAGGTCTGCGACTGCTACAGagaggaaggcaa
agcaCCGCACGTGGAGAATCGATATTATGtcaacgaggagaaggacctcC
GTGTCTCTTTTATAGGCTGGTTCGGGAATCATCCACCGCGAGGGCACGcc
atccccgcctcggcTCCGCTCACGCAGGACGCTCTTGGTTGCGCCCCGGG
AGCCTGTCAGGGTCCCGTCAACTGGGAAGCGccagtctcctccctcctcc
aagGCTCCTTCCTACGTGCCACGGTCCGCCCGAcgcacctcttcctcaac
gCGGGCCTGTGGGGCCCGATCAGCGGAGCCGTGCTCAGtGACGTGGTCGA
GGCTGCCAAGAATTTGTCCACTTCCGAGCACGTGGACGTGTTTTGGAAGA
CAACCACGAGTCGGAGTGAGAAAGCGTCGACggtaaggaaggaaggaggg
aaaacgcTTCTCacacggggaggagggatgaaggggcggcggaggggaca
GCGCAGGGCACCATGTTTCCCTGTCAGAGAGCTCTTGTACGAGCTTCATT
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