EWM20761.1, cds9910 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM20761.1 vs. NCBI_GenBank
Match: gi|585100636|gb|EWM20761.1| (hypothetical protein Naga_100405g3 [Nannochloropsis gaditana]) HSP 1 Score: 468.389 bits (1204), Expect = 3.864e-167 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
Query: 1 MHPYIPLFSPPFFSCPLLSQTLTFKGASRLKETWNDFYRRSSAFFGVREVCDCYREEGKAPHVENRYYVNEEKDLRVSFIGWFGNHPPRGHAIPASAPLTQDALGCAPGACQGPVNWEAPVSSLLQGSFLRATVRPTHLFLNAGLWGPISGAVLSDVVEAAKNLSTSEHVDVFWKTTTSRSEKASTVRKEGGKTLLTRGGGMKGRRRGQRRAPCFPVRELLYELHL 226
MHPYIPLFSPPFFSCPLLSQTLTFKGASRLKETWNDFYRRSSAFFGVREVCDCYREEGKAPHVENRYYVNEEKDLRVSFIGWFGNHPPRGHAIPASAPLTQDALGCAPGACQGPVNWEAPVSSLLQGSFLRATVRPTHLFLNAGLWGPISGAVLSDVVEAAKNLSTSEHVDVFWKTTTSRSEKASTVRKEGGKTLLTRGGGMKGRRRGQRRAPCFPVRELLYELHL
Sbjct: 1 MHPYIPLFSPPFFSCPLLSQTLTFKGASRLKETWNDFYRRSSAFFGVREVCDCYREEGKAPHVENRYYVNEEKDLRVSFIGWFGNHPPRGHAIPASAPLTQDALGCAPGACQGPVNWEAPVSSLLQGSFLRATVRPTHLFLNAGLWGPISGAVLSDVVEAAKNLSTSEHVDVFWKTTTSRSEKASTVRKEGGKTLLTRGGGMKGRRRGQRRAPCFPVRELLYELHL 226
BLAST of EWM20761.1 vs. NCBI_GenBank
Match: gi|553192159|ref|XP_005855524.1| (hypothetical protein NGA_0609100 [Nannochloropsis gaditana CCMP526] >gi|422293536|gb|EKU20836.1| hypothetical protein NGA_0609100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 338.191 bits (866), Expect = 3.339e-116 Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0
Query: 20 QTLTFKGASRLKETWNDFYRRSSAFFGVREVCDCYREEGKAPHVENRYYVNEEKDLRVSFIGWFGNHPPRGHAIPASAPLTQDALGCAPGACQGPVNWEAPVSSLLQGSFLRATVRPTHLFLNAGLWGPISGAVLSDVVEAAKNLSTSEHVDVFWKTTTSRS 181
+TLTFKGASRLKETWNDFYRRSSAFFGVREVCDCYREEGKAPHVENRYYVNEEKDLRVSFIGWFGNHPPRGHAIPASAPLTQDALGCAPGACQGPVNWEAPVSSLLQGSFLRATVRPTHLFLNAGLWGPISGAVLSDVVEAAKNLSTSEHVDVFWKTTTSRS
Sbjct: 26 KTLTFKGASRLKETWNDFYRRSSAFFGVREVCDCYREEGKAPHVENRYYVNEEKDLRVSFIGWFGNHPPRGHAIPASAPLTQDALGCAPGACQGPVNWEAPVSSLLQGSFLRATVRPTHLFLNAGLWGPISGAVLSDVVEAAKNLSTSEHVDVFWKTTTSRS 187
BLAST of EWM20761.1 vs. NCBI_GenBank
Match: gi|552817289|ref|XP_005844900.1| (hypothetical protein CHLNCDRAFT_138448 [Chlorella variabilis] >gi|307104545|gb|EFN52798.1| hypothetical protein CHLNCDRAFT_138448 [Chlorella variabilis]) HSP 1 Score: 72.0182 bits (175), Expect = 3.981e-11 Identity = 58/173 (33.53%), Postives = 78/173 (45.09%), Query Frame = 0
Query: 31 KETWNDFYRRSSAFFGVREVCDCYREE---GKAPH------VENRYYVNEEKDLRVSFIGWFGNHPPRGHAIPASAPLTQDALGCAPGACQGPVNWEAPVSSLLQGSFLRATVR---PTHLFLNAGLWGPISGAVLSD---VVEAAKNLSTSEHVD-VFWKTTT-SRSEKAST 186
+ WNDF R +SA FG RE+CDCYR E G P ENR+++ + VS + P H P CAP C +W ++ LR VR PTH+ +N+G+WG S A D + AA S E + V W+TTT +R +A T
Sbjct: 169 EHDWNDFLRGTSALFGGRELCDCYRREYILGVTPRPPEKEKFENRFFITADGATAVSHFT-YTTAPHTVHGHFGFPPHLMGQTPCAPATCNQTADWAFDLA-------LRRVVRPLQPTHVIINSGMWGS-SNAFGDDKWRSIAAAGLYSVFEQLGRVIWRTTTAARGPRAPT 332
BLAST of EWM20761.1 vs. NCBI_GenBank
Match: gi|551674288|ref|XP_005839899.1| (hypothetical protein GUITHDRAFT_133326 [Guillardia theta CCMP2712] >gi|428184063|gb|EKX52919.1| hypothetical protein GUITHDRAFT_133326 [Guillardia theta CCMP2712]) HSP 1 Score: 61.2326 bits (147), Expect = 2.317e-7 Identity = 52/180 (28.89%), Postives = 77/180 (42.78%), Query Frame = 0
Query: 33 TWNDFYRRSSAFFGVREVCDCYREEGK-APHVENRYYVNE------EKDLRVSFIGWFGNHPPRGH-----------------------AIPASAP-LTQDALGCAPGACQGP-VNWEAPVSSLLQGSFLRATVRPTHLFLNAGLWGPISGAVLSDVVEAAKNLSTSEHVDVFWKTTTSR 180
TW FY SS F RE+CDCYR EG +P E R N +L +S++ FG P GH A+ A+A LT++ P G +W+ V ++L+ + + ++P L N GLWG + + V AA + + + +WK TT R
Sbjct: 767 TWRRFYLDSSRSFQGRELCDCYRPEGPWSPEFEMRVEENRFFSLLPPSNLSLSYLQVFGGFPMHGHFPGECRQRSSSSSSCSFHNLSRAALTAAAKVLTEEEYDHNPQLDTGSFFDWQGDVPTVLE--HVASEMQPDMLVFNTGLWGELKEEDYVEDVFAAGSRAVGKGGSCYWKRTTKR 944 The following BLAST results are available for this feature:
BLAST of EWM20761.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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