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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100907g2.10528.mrna |
| Orig protein id | gnl|cribi|Naga_100907g2.10528 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037258.1 | supercontig | KK037258.1:40632..42445 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9940 ID=rna9940|Name=rna9940|organism=Nannochloropsis gaditana|type=mRNA|length=1083bp
AGGTCTCGTATGCGTTTTTGTCATGACTAGGGCTAAATTTCTTATACAGA
ATCAAATTCCGACACAGCCTCTCGATCATCCAGGGAGGCGAGAAGGACGA
CGAGGCGCCCCCCATTTCTCTAGACATTTTCCTTTTCAACTAAAAGGAAC
ATTTCCATCTGTGTCGATTTTAGATCTTACCATGTGGCACAAATTTCATT
TTCACCAATGCTGACTGTTTTTTCCTTCGGTCTTCTTTACCTACAATAGG
CAGCAATCTTAGCAGCAACGTACGCAGCTCGCCTTCCCTACCCCCCCGAC
ACGTCGACACAACCTTACATCGTTAAGTCCTCTTTCCCCCTTCCGACTTA
TCAAGTATGCAGTCTCTTCGAATTGCCAGCGTCGCTGGTCTTTTACTAAG
CATGGCATGCGCTCCAGTGTCGGCGGAGGTCCCCGGTGGAGCTCTTCGCG
GTGGGAACAGCACTACTCGGAGTTTGGCGCCTCAGTGCCTGTATAAGGAC
ACGTTGGAGTGGACCTCGTCTCCCAACGGGGCCGTGCTTCTGAATGGAAA
TGCCTTCCACATCAAGGGCATCTCCTGGTTCGGGATCGAGAAAGGGGAGG
AGATGCTCCACGGGCTCAACAAACGGCCCATGGGCGATATCTTGGACTTC
GTCAAGACCAAGTTCAACGTCATCCGGGTTCCCTTTTCCGTTAAATTCGC
CCTCTCTGACCCGCTCACGAAACGGCCGGACCGTTACATCGTTGGCTTTG
GACTTGAGGACAAAACTTCCTTCGAGATTCTCGACATATTCGTGGCGGAG
TGCGGGAAACGAGGAATCTTCATCATGCTTGACCAGCACGACATTGTGGG
TGAGAAGGCGGAGCTGTGGTACGAGGTACGGAGGGCGGGGGAGGGGAGGG
GGAAGACTTTTTCCATCGAAGGCAATCGAGACAACTTGGGATAAATACAG
GGAGGGACGCGGACGGAAGGGGAAGAAGGAAGAACAAGGCCCATGCCTGA
GATTACCAACCTCTAGCACGGTCGGACTTCTCAACACAGAACCATGTGTT
CCCGCGGCTCGCTTACCGCCCTCCCTCCCTCCC back to topprotein sequence of rna9940 >rna9940-protein ID=rna9940-protein|Name=rna9940|organism=Nannochloropsis gaditana|type=polypeptide|length=276bp
MKTVVNFLHLQRYHRGAAMTIFPAWPNQETRTWSVWSLAAGLLIVALASS
LLAVMDPSALILTRHMKDGGSGSGTSTPFLLRHQEPRYAPLRVPDAHLPE
TDPRRRKKSEGGKKGGQSHEKEVSNNAWGPEAAGALNGTVDGSRGSDASS
LEDSAELPPLPSLGPPAPSSFLPPCSYSILQAAPDSVKWTVAATKGGRAG
GKEGEADGMTYTPRHALCVLRGFDGLTSGKGEGGAKGGGEGGEEAYACLR
GKHLVFMGDSLSRYQYLSLIRYLEEG back to topmRNA from alignment at KK037258.1:40632..42445+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9940 ID=rna9940|Name=rna9940|organism=Nannochloropsis gaditana|type=mRNA|length=1814bp|location=Sequence derived from alignment at KK037258.1:40632..42445+ (Nannochloropsis gaditana)
GAGAActtccgaggaggaaggaaatgggcgAGTACCCGGTGTTCCTACGC
GTGGGCGGCGCAAATAGGAACGCAAGCATGAACAAGCCTGCAGGCAAGCA
ACTACCACAACACTAAATTTTGCCACTGTAGTTATCGGACAAATCCTATG
GTGGCTCGCCTTTCTTCCTGTAAAGAGACGATGCTCAAGGCAACAATCCA
CAGTGCTAATGGGCCCCGCcccgttcccctcctgcGGGTGGGCCCAAAAT
ACTCACGAATTTGACTAAATTGTACCCAAACCCTCCCAACCCGCCACATT
ATGAAGACAGTGGTAAACTTTTTACATCTACAAAGGTATACTGTTGGAGG
TTTTTTTCATCTTTGGGACGGAgtagggaaaaagaagccggTGTACTCGC
TAATTCGAACTTCTCGGATCCGGCAGAAGGGCTTTCAAGGACACTTTCCT
GTCGCCAGTAATATTTCTTTTGCTCGCGCACACGCAACAGCCTGAGCTTA
AATTATTCATAAAGTGCGCATCATTTGCTCGGTGTCTCGTTCTCTAAATc
gatccttccttcttttccttctcaatGCCTTGCCGGGGGTCTTTCCCCTA
GATACCACCGTGGTGCTGCCATGACCATATTTCCTGCGTGGCCTAACCAA
GAGACCAGAACATGGTCAGTTTGGAGCTTAGCTGCGGGTTTGCTCATTGT
CGGTAAGAAGTGGACCcaaagggtgggaaagagcgaGTGCGAAGGCACAC
CTTTCAAGACAACTTCTGTTCACGATCTATGACAGTAGTATCATCAATCG
GAGGGAAATCGAGGTTAGTGTTGTTTTCAACTGCACACATTGACCACGTt
tatcttttcttttcctcttacAGCCCTGGCATCCTCCCTTTTGGCTGTGA
TGGACCCCTCCGCGCTCATCCTCACGAGGCACATGAAGGACGGCGGCAGC
GGCTCGGGAACCTCGACCCCATTCTTGCTTCGTCATCAAGAGGTAAACTT
ATGCATGCGCGTGTCCCTGGTTTCCCCTAGTAAGCAGTCAGTTCGGGGCT
TCGGGCTTTGGATCGTGCGTGACAGTTTttgacctggaggaggaagacgc
cgggCCCCTGGTGTTgggtttcctccctttcgcgcTAATGTGCTCGTCTC
GACTCAGTTGCGGCTATCGCATGGATACGGGACGCTTCTGCATGATTCGA
GCGACCTTTTACTGCTCTTACGatctcccatccctcctacAGCCCCGCTA
TGCCCCCCTTCGTGTCCCCGACGCGCACCTCCCCGAGACGGACCCAaggc
ggcggaagaagagcgagggagggaagaagggcgggcagTCCCACGAGAAG
GAAGTCTCCAACAACGCGTGGGGCCCCGAAGCAGCCGGGGCGCTCAATGG
CACTGTCGAtgggagcagagggagcgACGCCAGCAGCCTCGAGGACAGTG
CAGAGCtgcccccgctcccctccctgggcccccccgccccgtcctccttc
ctgcctccctgcagCTACTCCATCCTCCAAGCAGCCCCGGACTCGGTGAA
GTGGACCGTGGCAGCGacgaagggcgggagggcgggagggaaggagggcg
aggcagaCGGCATGACGTACACCCCCCGCCATGCTCTCTGCGTCCTGCGC
GGGTTCGACGGCTTGACaagcgggaaaggggagggaggggcaaagggagg
gggagagggcggggaggaggcgtacGCATGCTTACGTGGGAAGCATTTGG
TTTTCATGGGAGACAGCTTGTCACGGTATCAGTACTTGAGCCTGATCAGA
TACCTGGAGGAAGG back to topCoding sequence (CDS) from alignment at KK037258.1:40632..42445+ >rna9940 ID=rna9940|Name=rna9940|organism=Nannochloropsis gaditana|type=CDS|length=3308bp|location=Sequence derived from alignment at KK037258.1:40632..42445+ (Nannochloropsis gaditana)
ATGAAGACAGTGGTAAACTTTTTACATCTACAAAGATACCACCGTGGTGC
TGCCATGACCATATTTCCTGCGTGGCCTAACCAAGAGACCAGAACATGGT
CAGTTTGGAGCTTAGCTGCGGGTTTGCTCATTGTCGCCCTGGCATCCTCC
CTTTTGGCTGTGATGGACCCCTCCGCGCTCATCCTCACGAGGCACATGAA
GGACGGCGGCAGCGGCTCGGGAACCTCGACCCCATTCTTGCTTCGTCATC
AAGAGCCCCGCTATGCCCCCCTTCGTGTCCCCGACGCGCACCTCCCCGAG
ACGGACCCAaggcggcggaagaagagcgagggagggaagaagggcgggca
gTCCCACGAGAAGGAAGTCTCCAACAACGCGTGGGGCCCCGAAGCAGCCG
GGGCGCTCAATGGCACTGTCGAtgggagcagagggagcgACGCCAGCAGC
CTCGAGGACAGTGCAGAGCtgcccccgctcccctccctgggcccccccgc
cccgtcctccttcctgcctccctgcagCTACTCCATCCTCCAAGCAGCCC
CGGACTCGGTGAAGTGGACCGTGGCAGCGacgaagggcgggagggcggga
gggaaggagggcgaggcagaCGGCATGACGTACACCCCCCGCCATGCTCT
CTGCGTCCTGCGCGGGTTCGACGGCTTGACaagcgggaaaggggagggag
gggcaaagggagggggagagggcggggaggaggcgtacGCATGCTTACGT
GGGAAGCATTTGGTTTTCATGGGAGACAGCTTGTCACGGTATCAGTACTT
GAGCCTGATCAGATACCTGGAGGAAGGATGAAGACAGTGGTAAACTTTTT
ACATCTACAAAGATACCACCGTGGTGCTGCCATGACCATATTTCCTGCGT
GGCCTAACCAAGAGACCAGAACATGGTCAGTTTGGAGCTTAGCTGCGGGT
TTGCTCATTGTCGCCCTGGCATCCTCCCTTTTGGCTGTGATGGACCCCTC
CGCGCTCATCCTCACGAGGCACATGAAGGACGGCGGCAGCGGCTCGGGAA
CCTCGACCCCATTCTTGCTTCGTCATCAAGAGCCCCGCTATGCCCCCCTT
CGTGTCCCCGACGCGCACCTCCCCGAGACGGACCCAaggcggcggaagaa
gagcgagggagggaagaagggcgggcagTCCCACGAGAAGGAAGTCTCCA
ACAACGCGTGGGGCCCCGAAGCAGCCGGGGCGCTCAATGGCACTGTCGAt
gggagcagagggagcgACGCCAGCAGCCTCGAGGACAGTGCAGAGCtgcc
cccgctcccctccctgggcccccccgccccgtcctccttcctgcctccct
gcagCTACTCCATCCTCCAAGCAGCCCCGGACTCGGTGAAGTGGACCGTG
GCAGCGacgaagggcgggagggcgggagggaaggagggcgaggcagaCGG
CATGACGTACACCCCCCGCCATGCTCTCTGCGTCCTGCGCGGGTTCGACG
GCTTGACaagcgggaaaggggagggaggggcaaagggagggggagagggc
ggggaggaggcgtacGCATGCTTACGTGGGAAGCATTTGGTTTTCATGGG
AGACAGCTTGTCACGGTATCAGTACTTGAGCCTGATCAGATACCTGGAGG
AAGGATGAAGACAGTGGTAAACTTTTTACATCTACAAAGATACCACCGTG
GTGCTGCCATGACCATATTTCCTGCGTGGCCTAACCAAGAGACCAGAACA
TGGTCAGTTTGGAGCTTAGCTGCGGGTTTGCTCATTGTCGCCCTGGCATC
CTCCCTTTTGGCTGTGATGGACCCCTCCGCGCTCATCCTCACGAGGCACA
TGAAGGACGGCGGCAGCGGCTCGGGAACCTCGACCCCATTCTTGCTTCGT
CATCAAGAGCCCCGCTATGCCCCCCTTCGTGTCCCCGACGCGCACCTCCC
CGAGACGGACCCAaggcggcggaagaagagcgagggagggaagaagggcg
ggcagTCCCACGAGAAGGAAGTCTCCAACAACGCGTGGGGCCCCGAAGCA
GCCGGGGCGCTCAATGGCACTGTCGAtgggagcagagggagcgACGCCAG
CAGCCTCGAGGACAGTGCAGAGCtgcccccgctcccctccctgggccccc
ccgccccgtcctccttcctgcctccctgcagCTACTCCATCCTCCAAGCA
GCCCCGGACTCGGTGAAGTGGACCGTGGCAGCGacgaagggcgggagggc
gggagggaaggagggcgaggcagaCGGCATGACGTACACCCCCCGCCATG
CTCTCTGCGTCCTGCGCGGGTTCGACGGCTTGACaagcgggaaaggggag
ggaggggcaaagggagggggagagggcggggaggaggcgtacGCATGCTT
ACGTGGGAAGCATTTGGTTTTCATGGGAGACAGCTTGTCACGGTATCAGT
ACTTGAGCCTGATCAGATACCTGGAGGAAGGATGAAGACAGTGGTAAACT
TTTTACATCTACAAAGATACCACCGTGGTGCTGCCATGACCATATTTCCT
GCGTGGCCTAACCAAGAGACCAGAACATGGTCAGTTTGGAGCTTAGCTGC
GGGTTTGCTCATTGTCGCCCTGGCATCCTCCCTTTTGGCTGTGATGGACC
CCTCCGCGCTCATCCTCACGAGGCACATGAAGGACGGCGGCAGCGGCTCG
GGAACCTCGACCCCATTCTTGCTTCGTCATCAAGAGCCCCGCTATGCCCC
CCTTCGTGTCCCCGACGCGCACCTCCCCGAGACGGACCCAaggcggcgga
agaagagcgagggagggaagaagggcgggcagTCCCACGAGAAGGAAGTC
TCCAACAACGCGTGGGGCCCCGAAGCAGCCGGGGCGCTCAATGGCACTGT
CGAtgggagcagagggagcgACGCCAGCAGCCTCGAGGACAGTGCAGAGC
tgcccccgctcccctccctgggcccccccgccccgtcctccttcctgcct
ccctgcagCTACTCCATCCTCCAAGCAGCCCCGGACTCGGTGAAGTGGAC
CGTGGCAGCGacgaagggcgggagggcgggagggaaggagggcgaggcag
aCGGCATGACGTACACCCCCCGCCATGCTCTCTGCGTCCTGCGCGGGTTC
GACGGCTTGACaagcgggaaaggggagggaggggcaaagggagggggaga
gggcggggaggaggcgtacGCATGCTTACGTGGGAAGCATTTGGTTTTCA
TGGGAGACAGCTTGTCACGGTATCAGTACTTGAGCCTGATCAGATACCTG
GAGGAAGG back to top
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