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Properties
| Property Name | Value |
|---|
| Product | exoribonuclease 2 |
| Orig transcript id | gnl|cribi|Naga_100423g4.2493.mrna |
| Orig protein id | gnl|cribi|Naga_100423g4.2493 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037257.1 | supercontig | KK037257.1:120240..122867 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9917 ID=rna9917|Name=rna9917|organism=Nannochloropsis gaditana|type=mRNA|length=621bp
GATATCTCAGCATTGTGCCCAGGTGGAGAAGAATCTGTTCAAAGCCCTTT
TTGCCCACTGCGTCTCGGGGGGGTTCTGCCCCTCCCTCCCTCCCTCCCTC
CCACCTTCCCTCCCTCCTTCCCCTCCTCCTTCTCAGCCTCAGCGTGGACT
GCGACTCTGACGCTTGAAGAAAAAAGATTCACTCTTTCGGAGCCACAGCC
TACCATGAAGGCGGCGAAGCAAGCGATTTGTGAGCTCGTCTTGAAGGAGG
TGGTGCCCGAGGCCTATGCCACCTACTTCCCCGCCTCCGTGGATGGGAAG
GACGGTAGGGAGGGAGGGAGGGAGGGTGGAGAAGAGGGGAAGACGAGGAC
CAGGGCAGAAAGGAGGCGGGTGGAAAACGGGAGAGTGGATGAAAAGCAGG
AGCTAGGACGCAGGGGAGGGGATGGACACGTAAAAAGCGATGGGTCCTGG
CGGCCTCAGTACACTCCGGTTCCTTCTGAGCATGAGAATGCTGGTGGCAA
GGGGAGGTGAAGAGGGGAAGAAGGTGGGTAAGAACACTCACATCCGGGTA
TCTTGTTGGAATTTTTCCCTCCCTGGCAGGTTCCGTGGGCGAGGAGGAGG
AGGAGGAAGAGGAGGAGGAGG back to topprotein sequence of rna9917 >rna9917-protein ID=rna9917-protein|Name=rna9917|organism=Nannochloropsis gaditana|type=polypeptide|length=437bp
EEEEGLEGRTEGGEEEEVVDWRYEEKLFDEEQYLRGLLWNVQMYVDGYCP
DYQYAYRHRFAPSAQCLADFIRNQTKNNASSFALSVPTSLTPPLHPALAC
LAVMPRWGLHLVPENLSSVLESSARVNKMYETGAAFSLNLLMDTVNSSHP
HLVRSQNFHWTEIKANTPCASPTPSSSPPSSSSSTSPPPSLSLHLPPLSR
ARKVAATQSPPLRSWVQSPSLLVSTPMPKKWKDTWKREVKEEERWGGKKS
EASKAGRGRKGEDGGGGQGKAGKAKSSPTSGDMGSEGGKKGRSTAVPRRN
GAGFQPSRGKRKKSSEAPCPPSVPPSLPPTPVKLGQRSTPSPAASLLDRA
QVLPARVPGSNHPSSPSSGASFFPSKPDFSSHDLDGPGEFPIPSSSLPPK
KRGRPRSPPKARMMWDVAAEHTLLRAACRPGNFCLRL back to topmRNA from alignment at KK037257.1:120240..122867+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9917 ID=rna9917|Name=rna9917|organism=Nannochloropsis gaditana|type=mRNA|length=2628bp|location=Sequence derived from alignment at KK037257.1:120240..122867+ (Nannochloropsis gaditana)
gaggaggaggaagggctcgagggcaggacggaggggggggaagaggaaga
ggtggtggactgGCGCTATGAAGAGAAGCTCTTCGACGAGGAGCAGTACC
TGCGGGGTCTGCTGTGGAACGTTCAAATGTATGTGGATGGATATTGTCCC
GATTACCAATACGCATACCGGtacgtccctctcccttctcctcggccttt
tctcctttttcctccctcggactttttccccttccctggcCTTCGgactt
ttcttccctcctcgttaccctccttcttcctccctctttccccttcccct
cttttccctccctttgggTGCAGCCACCGCTTCGCGCCCTCGGCGCAATG
CTTGGCCGACTTTATCCGGAATCAGACGAAGAACAACGCGTCCAGCTTTG
CACTCTCGGTTCCGACCTCCCTCACGCCGCCACTCCACCCGGCCCTGGCC
TGCTTGGCAGTTATGCCTCGGTAtggccgttccctccctccctccctccc
tccctccctccctccctccctccctccctctttttcttcaatCGGCCTTA
CCCTGTCTGTACACAGGCTTGctgcctttttttcctcctcctttttgacc
ctccctcccccgatgTGTTCCTCCCACCTTCTCAAATGCCTGCCAGGCTA
CTATCACGCCCTTTGCTGTCCTCACCTTCTCGAAGCGCTCTctctgttag
ggttagggttagatTTAGGGTTACGAGTGCAAGTCTTCACCTTTCCTTTT
cgtgtccttcccctctttccctccccctttctctcctttaGCTGGGGCCT
TCATTTGGTCCCGGAGAACCTCTCTTCCGTCCTGGAGAGCTCTGCCCGCG
TGAACAAGATGTACGAGACAGGGGCGGCCTTCTCCCTGAACCTATTGATG
GGTAAAGCACGGAGGGgacaaagggggggggggggcaaggcaaacacgag
ggggggggaggggagagcgatGGATGCAGGTGCGCGTCGCGGGCCTGGTG
TAGGAGGAGTCATGGCCGGAAAGGTGTCGAtcagaaaagggaggagaacc
gatgtcgggaaagggagggaaagcgcagTGATGGAGAGTGTCTGAGCGGG
AGGGGTCCTTGGGCGTGGACACCTTGACGTGCCGTGACAATCattacctc
tccctctcgtctttccttttttttttccccattccctctcccacaGACAC
TGTGAATAGCTCTCACCCTCATCTTGTGCGCAGCCAAAATTTTCACTGGA
CAGAAATCAAAGCCAATACCCCTTGTGCCTCCCCTaccccgtcgtcctcc
cctccttcctcctcttcgtcgacctctccccctccctccctctcgttgcA
CCTACCCCCTCTGTCGCGAGCTCGCAAGGTAGCGGCCACGCAGAGCCCGC
CCCTGAGAAGCTGGGTccagtctccctcccttcttgtctCTACCCCCATG
CCCAAGAAATGGAAGGAtacgtggaagagggaggtgaaggaagaggaacg
atggggagggaagaagtcCGAAGCCTCCAAAGCGGGCaggggacggaaag
gggaggatggaggcggtggacagGGAAAAGCAGGCAAGGCGAAGAGCTCG
CCGACCTCAGGAGACatggggagcgagggagggaagaagggcaggTCGAC
CGCGGTCCCAAGAAGGAATGGCGCGGGGTTCCAACCcagcagggggaaga
gaaagaagtccTCGGAAGCACCATGCCCTCcgtcggtccctccctccctc
cctccgacccctgTCAAACTTGGACAGCGGTCCACTCCATCGCCAGCGGC
CTCCCTCTTAGACCGTGCACAGGTGCTGCCAGCTCGAGTTCCCGGTTCGA
ATCatccttcatctccctcctccggaGCAAGCTTTTTTCCGAGCAAGCCA
GACTTTTCCTCGCACGACCTCGACGGGCCGGGCGAGTTTCCAatcccgtc
ttcctccctcccccccaaaaaacgaGGGCggccccgttccccccccaagg
CACGAATGATGTGGGACGTTGCAGCGGAACATACACTGCTGCGTGCGGCC
TGTCGCCCGGGAAATTTTTGCCTTCGTTTGTAGCCACCTTCTTCacctgc
ctgcctccttttgTATTCTTCTTTCCAAATTTTGTGCCGGGGAGGTATAC
ATAGGGGGATTCGGTCATGTACAGTACCACTGACGTATGTCTTGTTTCAG
AAGCAATCCATGGCTCTGCATCGAACTTTTTGGATCCCTGCCCTGAACTA
AGTGACACATGTATACATGGATGGGGGCGTCACTTTAcaaagaaatgaaa
gagaTGTCCATTTGTGCCAGTAGCATTTCAAGTAGCTTTGATCTCCTCGT
GCCTGCCTGGTTTGGAAAGAATTTATTGTTTTTGCAGTATCCTGGAAGTG
ACAAAGTGAAGATGAACAGGATGGCTTTCGAGATCTTTGGCTGCTCAACA
TGTCTGTAAGTGGAGTGCATTGTATGACCATCCCACGACTTTCATGTCAG
TTTTTTTCCTACAGGATTTATGTCGTTCAATGCTTACAACGATCTGCAAC
GCTCCAATCAATAGAAAGATGTTTTAATATGTTCAATGTCCAGACAATTT
CTAGAATGCACATGAACTTAAATAGGCC back to topCoding sequence (CDS) from alignment at KK037257.1:120240..122867+ >rna9917 ID=rna9917|Name=rna9917|organism=Nannochloropsis gaditana|type=CDS|length=5256bp|location=Sequence derived from alignment at KK037257.1:120240..122867+ (Nannochloropsis gaditana)
gaggaggaggaagggctcgagggcaggacggaggggggggaagaggaaga
ggtggtggactgGCGCTATGAAGAGAAGCTCTTCGACGAGGAGCAGTACC
TGCGGGGTCTGCTGTGGAACGTTCAAATGTATGTGGATGGATATTGTCCC
GATTACCAATACGCATACCGCCACCGCTTCGCGCCCTCGGCGCAATGCTT
GGCCGACTTTATCCGGAATCAGACGAAGAACAACGCGTCCAGCTTTGCAC
TCTCGGTTCCGACCTCCCTCACGCCGCCACTCCACCCGGCCCTGGCCTGC
TTGGCAGTTATGCCTCGCTGGGGCCTTCATTTGGTCCCGGAGAACCTCTC
TTCCGTCCTGGAGAGCTCTGCCCGCGTGAACAAGATGTACGAGACAGGGG
CGGCCTTCTCCCTGAACCTATTGATGGACACTGTGAATAGCTCTCACCCT
CATCTTGTGCGCAGCCAAAATTTTCACTGGACAGAAATCAAAGCCAATAC
CCCTTGTGCCTCCCCTaccccgtcgtcctcccctccttcctcctcttcgt
cgacctctccccctccctccctctcgttgcACCTACCCCCTCTGTCGCGA
GCTCGCAAGGTAGCGGCCACGCAGAGCCCGCCCCTGAGAAGCTGGGTcca
gtctccctcccttcttgtctCTACCCCCATGCCCAAGAAATGGAAGGAta
cgtggaagagggaggtgaaggaagaggaacgatggggagggaagaagtcC
GAAGCCTCCAAAGCGGGCaggggacggaaaggggaggatggaggcggtgg
acagGGAAAAGCAGGCAAGGCGAAGAGCTCGCCGACCTCAGGAGACatgg
ggagcgagggagggaagaagggcaggTCGACCGCGGTCCCAAGAAGGAAT
GGCGCGGGGTTCCAACCcagcagggggaagagaaagaagtccTCGGAAGC
ACCATGCCCTCcgtcggtccctccctccctccctccgacccctgTCAAAC
TTGGACAGCGGTCCACTCCATCGCCAGCGGCCTCCCTCTTAGACCGTGCA
CAGGTGCTGCCAGCTCGAGTTCCCGGTTCGAATCatccttcatctccctc
ctccggaGCAAGCTTTTTTCCGAGCAAGCCAGACTTTTCCTCGCACGACC
TCGACGGGCCGGGCGAGTTTCCAatcccgtcttcctccctcccccccaaa
aaacgaGGGCggccccgttccccccccaaggCACGAATGATGTGGGACGT
TGCAGCGGAACATACACTGCTGCGTGCGGCCTGTCGCCCGGGAAATTTTT
GCCTTCGTTTGTAGgaggaggaggaagggctcgagggcaggacggagggg
ggggaagaggaagaggtggtggactgGCGCTATGAAGAGAAGCTCTTCGA
CGAGGAGCAGTACCTGCGGGGTCTGCTGTGGAACGTTCAAATGTATGTGG
ATGGATATTGTCCCGATTACCAATACGCATACCGCCACCGCTTCGCGCCC
TCGGCGCAATGCTTGGCCGACTTTATCCGGAATCAGACGAAGAACAACGC
GTCCAGCTTTGCACTCTCGGTTCCGACCTCCCTCACGCCGCCACTCCACC
CGGCCCTGGCCTGCTTGGCAGTTATGCCTCGCTGGGGCCTTCATTTGGTC
CCGGAGAACCTCTCTTCCGTCCTGGAGAGCTCTGCCCGCGTGAACAAGAT
GTACGAGACAGGGGCGGCCTTCTCCCTGAACCTATTGATGGACACTGTGA
ATAGCTCTCACCCTCATCTTGTGCGCAGCCAAAATTTTCACTGGACAGAA
ATCAAAGCCAATACCCCTTGTGCCTCCCCTaccccgtcgtcctcccctcc
ttcctcctcttcgtcgacctctccccctccctccctctcgttgcACCTAC
CCCCTCTGTCGCGAGCTCGCAAGGTAGCGGCCACGCAGAGCCCGCCCCTG
AGAAGCTGGGTccagtctccctcccttcttgtctCTACCCCCATGCCCAA
GAAATGGAAGGAtacgtggaagagggaggtgaaggaagaggaacgatggg
gagggaagaagtcCGAAGCCTCCAAAGCGGGCaggggacggaaaggggag
gatggaggcggtggacagGGAAAAGCAGGCAAGGCGAAGAGCTCGCCGAC
CTCAGGAGACatggggagcgagggagggaagaagggcaggTCGACCGCGG
TCCCAAGAAGGAATGGCGCGGGGTTCCAACCcagcagggggaagagaaag
aagtccTCGGAAGCACCATGCCCTCcgtcggtccctccctccctccctcc
gacccctgTCAAACTTGGACAGCGGTCCACTCCATCGCCAGCGGCCTCCC
TCTTAGACCGTGCACAGGTGCTGCCAGCTCGAGTTCCCGGTTCGAATCat
ccttcatctccctcctccggaGCAAGCTTTTTTCCGAGCAAGCCAGACTT
TTCCTCGCACGACCTCGACGGGCCGGGCGAGTTTCCAatcccgtcttcct
ccctcccccccaaaaaacgaGGGCggccccgttccccccccaaggCACGA
ATGATGTGGGACGTTGCAGCGGAACATACACTGCTGCGTGCGGCCTGTCG
CCCGGGAAATTTTTGCCTTCGTTTGTAGgaggaggaggaagggctcgagg
gcaggacggaggggggggaagaggaagaggtggtggactgGCGCTATGAA
GAGAAGCTCTTCGACGAGGAGCAGTACCTGCGGGGTCTGCTGTGGAACGT
TCAAATGTATGTGGATGGATATTGTCCCGATTACCAATACGCATACCGCC
ACCGCTTCGCGCCCTCGGCGCAATGCTTGGCCGACTTTATCCGGAATCAG
ACGAAGAACAACGCGTCCAGCTTTGCACTCTCGGTTCCGACCTCCCTCAC
GCCGCCACTCCACCCGGCCCTGGCCTGCTTGGCAGTTATGCCTCGCTGGG
GCCTTCATTTGGTCCCGGAGAACCTCTCTTCCGTCCTGGAGAGCTCTGCC
CGCGTGAACAAGATGTACGAGACAGGGGCGGCCTTCTCCCTGAACCTATT
GATGGACACTGTGAATAGCTCTCACCCTCATCTTGTGCGCAGCCAAAATT
TTCACTGGACAGAAATCAAAGCCAATACCCCTTGTGCCTCCCCTaccccg
tcgtcctcccctccttcctcctcttcgtcgacctctccccctccctccct
ctcgttgcACCTACCCCCTCTGTCGCGAGCTCGCAAGGTAGCGGCCACGC
AGAGCCCGCCCCTGAGAAGCTGGGTccagtctccctcccttcttgtctCT
ACCCCCATGCCCAAGAAATGGAAGGAtacgtggaagagggaggtgaagga
agaggaacgatggggagggaagaagtcCGAAGCCTCCAAAGCGGGCaggg
gacggaaaggggaggatggaggcggtggacagGGAAAAGCAGGCAAGGCG
AAGAGCTCGCCGACCTCAGGAGACatggggagcgagggagggaagaaggg
caggTCGACCGCGGTCCCAAGAAGGAATGGCGCGGGGTTCCAACCcagca
gggggaagagaaagaagtccTCGGAAGCACCATGCCCTCcgtcggtccct
ccctccctccctccgacccctgTCAAACTTGGACAGCGGTCCACTCCATC
GCCAGCGGCCTCCCTCTTAGACCGTGCACAGGTGCTGCCAGCTCGAGTTC
CCGGTTCGAATCatccttcatctccctcctccggaGCAAGCTTTTTTCCG
AGCAAGCCAGACTTTTCCTCGCACGACCTCGACGGGCCGGGCGAGTTTCC
AatcccgtcttcctccctcccccccaaaaaacgaGGGCggccccgttccc
cccccaaggCACGAATGATGTGGGACGTTGCAGCGGAACATACACTGCTG
CGTGCGGCCTGTCGCCCGGGAAATTTTTGCCTTCGTTTGTAGgaggagga
ggaagggctcgagggcaggacggaggggggggaagaggaagaggtggtgg
actgGCGCTATGAAGAGAAGCTCTTCGACGAGGAGCAGTACCTGCGGGGT
CTGCTGTGGAACGTTCAAATGTATGTGGATGGATATTGTCCCGATTACCA
ATACGCATACCGCCACCGCTTCGCGCCCTCGGCGCAATGCTTGGCCGACT
TTATCCGGAATCAGACGAAGAACAACGCGTCCAGCTTTGCACTCTCGGTT
CCGACCTCCCTCACGCCGCCACTCCACCCGGCCCTGGCCTGCTTGGCAGT
TATGCCTCGCTGGGGCCTTCATTTGGTCCCGGAGAACCTCTCTTCCGTCC
TGGAGAGCTCTGCCCGCGTGAACAAGATGTACGAGACAGGGGCGGCCTTC
TCCCTGAACCTATTGATGGACACTGTGAATAGCTCTCACCCTCATCTTGT
GCGCAGCCAAAATTTTCACTGGACAGAAATCAAAGCCAATACCCCTTGTG
CCTCCCCTaccccgtcgtcctcccctccttcctcctcttcgtcgacctct
ccccctccctccctctcgttgcACCTACCCCCTCTGTCGCGAGCTCGCAA
GGTAGCGGCCACGCAGAGCCCGCCCCTGAGAAGCTGGGTccagtctccct
cccttcttgtctCTACCCCCATGCCCAAGAAATGGAAGGAtacgtggaag
agggaggtgaaggaagaggaacgatggggagggaagaagtcCGAAGCCTC
CAAAGCGGGCaggggacggaaaggggaggatggaggcggtggacagGGAA
AAGCAGGCAAGGCGAAGAGCTCGCCGACCTCAGGAGACatggggagcgag
ggagggaagaagggcaggTCGACCGCGGTCCCAAGAAGGAATGGCGCGGG
GTTCCAACCcagcagggggaagagaaagaagtccTCGGAAGCACCATGCC
CTCcgtcggtccctccctccctccctccgacccctgTCAAACTTGGACAG
CGGTCCACTCCATCGCCAGCGGCCTCCCTCTTAGACCGTGCACAGGTGCT
GCCAGCTCGAGTTCCCGGTTCGAATCatccttcatctccctcctccggaG
CAAGCTTTTTTCCGAGCAAGCCAGACTTTTCCTCGCACGACCTCGACGGG
CCGGGCGAGTTTCCAatcccgtcttcctccctcccccccaaaaaacgaGG
GCggccccgttccccccccaaggCACGAATGATGTGGGACGTTGCAGCGG
AACATACACTGCTGCGTGCGGCCTGTCGCCCGGGAAATTTTTGCCTTCGT
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