rna9904, rna9904 (mRNA) Nannochloropsis gaditana

Overview
Namerna9904
Unique Namerna9904
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length831
Alignment locationKK037257.1:95601..96331 -

Link to JBrowse

Properties
Property NameValue
Productdna polymerase zeta subunit
Orig transcript idgnl|cribi|Naga_102284g1.10681.mrna
Orig protein idgnl|cribi|Naga_102284g1.10681
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037257.1supercontigKK037257.1:95601..96331 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102284g1gene9611Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9904rna9904-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20800.1cds9873Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9904 ID=rna9904|Name=rna9904|organism=Nannochloropsis gaditana|type=mRNA|length=831bp
ACAGAAGGTTCTTAAATCCTTAGATCTTTTCACACACACCTTTGTAGCAA
TGAATTTTTCGCACTTGGTGTCGAAGAGCTTCATGTAAAGGCATTTATAA
CCGGGCACGGGTAGCTGACTCTTTGTACCAATAACCTCCTTCCCACAGCA
ACATCAAGCTTCCATAATGGCTTCAGTGGTGGGTGAACGAGAAATCGACT
TGAGCAAACTATCAATAGAGCAGCTGAACCAGCTGAAAACGCAACTGGGA
GAGGAGCTGGAGACCATTACGCGGCACTACGCCTCACTGCGCGAAGCCCA
ATCCCGGCTGAACGGCTGCCGGACCTCTGTCAACGAACTAGCACCTACAA
AGAACGGTGACGAGATTCTTGTTCCCTTAACTCAATCTCTGTACGTCCCT
GGCACTATAAGCGACGCGGACAAGGTCCTTGTGGACGTGGGCACCGGCTA
CTACATCGAAAAGACACTACCTAAGGCGAAAGAATACCTGGAGAAAAAGA
TTGCCGTCATCAACACAAATGCGGAGTCCGTCGCACAGGTCCTGACGCAG
AAGGAGAAGTCTCTGCGCATGGTGTCCGGGTACTTTCAAAAGAAACTGAT
GGTGATGAGCCAGACGAGCCAAGCACGGCAAGCGCAACGGGCGGCGCAGG
GGATGTCGTAGAACAGATACAGGACCAGGGGAGGGAGGGAGGGAGGAAGG
GAGGGAGGGAGGGGAATGGAGGGAAAAAAGGCGTCGACAAACGTGTACTG
GAGGATGATCGGATGATCTCGCTGTGCCATGGTTGCTTTTTTGATACTGT
TTGGTGGTGCCATTAACGGTCTTCCGTTTAC
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protein sequence of rna9904

>rna9904-protein ID=rna9904-protein|Name=rna9904|organism=Nannochloropsis gaditana|type=polypeptide|length=113bp
MRGELKLSMYSQASVVAHVLNRRHPAPSFSALTAWFVQGGAKGRAQALRH
VLQTSRLNLEVLDRLDLLGRTSEMARVFGIDFFSVLNRGSQYRVEAVLGR
VSKPLGYVALSPR
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mRNA from alignment at KK037257.1:95601..96331-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9904 ID=rna9904|Name=rna9904|organism=Nannochloropsis gaditana|type=mRNA|length=731bp|location=Sequence derived from alignment at KK037257.1:95601..96331- (Nannochloropsis gaditana)
CAGGCCGGACCGTCCTCAACCTCTGGCGGTTGATGCGGGGAGAGCTCAAG
CTGAGCATGTACTCGCAAGCCAGCGTTGTGGCCCATGTGCTGAATCGACG
CCACCCCGCGCCTTCCTTCTCCGCCCTCACTGCCTGGTTCGTCCAGGGAG
GGGCAAAAGGCCGGGCCCAGGTACGTCCTTTGTCCCTCCCTCCCCCGCTT
CCTCCTCCCTTTCTTCCACCCTCCCTCCCGCCCTCCCTCCCTTCTGCCCG
TCCACTCTCTCCTTGCCATTCGGCTCCCTCTCTATCCGGGCTCTCATCTT
CCACGTAAGAGGCTTCGTCTGGATGCCGAGGTCCTGAAGGAAGCCCTCCC
TCCCTCCCTCCCTCCCTCTCTCTCTCAGGCCCTCCGCCACGTCCTACAGA
CCTCCCGCTTGAACCTGGAGGTGTTGGATCGCCTGGACCTGCTGGGGCGG
ACGAGCGAGATGGCGCGGGTCTTCGGCATCGATTTCTTCTCCGTCCTGAA
CCGGGGGAGCCAGTACCGGTAGGGCGGGGGGGAGGGAGGGGAGACCGGCA
ATGGACGGGGCAGGTGGCCCAGGGAGGAGGGAATGGCGCGGGTGGAAAGG
GAGCTTGGGCATGCGCCAAGGCGTATTCCGTGACTGATTTGCGTGGGGAT
CTTTGCCATATATACAGAGTGGAAGCAGTGCTTGGGCGGGTCAGCAAGCC
ATTGGGCTACGTCGCGCTCTCTCCCAGGTAG
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Coding sequence (CDS) from alignment at KK037257.1:95601..96331-

>rna9904 ID=rna9904|Name=rna9904|organism=Nannochloropsis gaditana|type=CDS|length=1026bp|location=Sequence derived from alignment at KK037257.1:95601..96331- (Nannochloropsis gaditana)
AGTGGAAGCAGTGCTTGGGCGGGTCAGCAAGCCATTGGGCTACGTCGCGC
TCTCTCCCAGGTAGGCCCTCCGCCACGTCCTACAGACCTCCCGCTTGAAC
CTGGAGGTGTTGGATCGCCTGGACCTGCTGGGGCGGACGAGCGAGATGGC
GCGGGTCTTCGGCATCGATTTCTTCTCCGTCCTGAACCGGGGGAGCCAGT
ACCGATGCGGGGAGAGCTCAAGCTGAGCATGTACTCGCAAGCCAGCGTTG
TGGCCCATGTGCTGAATCGACGCCACCCCGCGCCTTCCTTCTCCGCCCTC
ACTGCCTGGTTCGTCCAGGGAGGGGCAAAAGGCCGGGCCCAGAGTGGAAG
CAGTGCTTGGGCGGGTCAGCAAGCCATTGGGCTACGTCGCGCTCTCTCCC
AGGTAGGCCCTCCGCCACGTCCTACAGACCTCCCGCTTGAACCTGGAGGT
GTTGGATCGCCTGGACCTGCTGGGGCGGACGAGCGAGATGGCGCGGGTCT
TCGGCATCGATTTCTTCTCCGTCCTGAACCGGGGGAGCCAGTACCGATGC
GGGGAGAGCTCAAGCTGAGCATGTACTCGCAAGCCAGCGTTGTGGCCCAT
GTGCTGAATCGACGCCACCCCGCGCCTTCCTTCTCCGCCCTCACTGCCTG
GTTCGTCCAGGGAGGGGCAAAAGGCCGGGCCCAGAGTGGAAGCAGTGCTT
GGGCGGGTCAGCAAGCCATTGGGCTACGTCGCGCTCTCTCCCAGGTAGGC
CCTCCGCCACGTCCTACAGACCTCCCGCTTGAACCTGGAGGTGTTGGATC
GCCTGGACCTGCTGGGGCGGACGAGCGAGATGGCGCGGGTCTTCGGCATC
GATTTCTTCTCCGTCCTGAACCGGGGGAGCCAGTACCGATGCGGGGAGAG
CTCAAGCTGAGCATGTACTCGCAAGCCAGCGTTGTGGCCCATGTGCTGAA
TCGACGCCACCCCGCGCCTTCCTTCTCCGCCCTCACTGCCTGGTTCGTCC
AGGGAGGGGCAAAAGGCCGGGCCCAG
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Synonyms
Publications