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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100524g2.10024.mrna |
| Orig protein id | gnl|cribi|Naga_100524g2.10024 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037257.1 | supercontig | KK037257.1:18707..21341 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9871 ID=rna9871|Name=rna9871|organism=Nannochloropsis gaditana|type=mRNA|length=851bp
AGGAATACTGGTTTGAGTAAATTATTGGTCATCCCCCCCAACGCGAGAAG
AGCCTCCGCAAGTATGCATATCATTCAAGAAGTCCCATTTCTTCGGATTT
CGTTTCCCACAACGTCATGGCGCACCCTCGCGATCTACATACCACTGCGT
AGCACGCAAGCACGGTAGCAGTCGTGGAGTCGACCTTCACACCTGTTGAA
AAGGCCGACGTCACTTTCCTTCGGGGCACGGAGGCTGATAAAGTGATGTG
TGACGGCGTGGAGTGTCCCAAAGGAGAAATGTGCATGCGCAGCAGCTCGG
GCAGTCGCTACTGCATGAAAATGTAGAGCTTTAACATCAGCTGTTAAATC
AACAACGATCCATGCAAGGCGTCACTACCAAAGAAGAATGCCTGGCAGGA
CGAAATGGGAAATGGCCTCGTTCCTCCAGGATTTGTGTTTCCAGAGGCCC
GGTAGGATTTTATTTAAAGATGAATGGAGACATTGTACGTGCAAGAGTGA
GTTGCGTGATGTCGGGTAAAGGCGAGGAGCTGCCGAGTGTTTTTCTCTAT
TGCCCAGTCCACATCTGTGTCTGTGGTATATTTTTGTCGCGCGTTATCAT
TCCTCTTAGTTCTAAGAGATCGACTTACTGTAGGCAGTCGAAGGACAAAG
CTAGTATTGATGTTTAAAGCCAGGGTCTTGGCACGCTCGACGTTAATTAC
TTGCTTCCGAAGCGTGCACGAAGCACGCGAACTCATGACGTTTAAAAAAA
ATGAGAGGGATGCTACACATGTGTGGGTTCGGGACCAGGGTCAAAGCCCT
TTTACTTCTCCCTCCCCTCCTTGTCCCTTGACATTTTCACTCCGTACCTG
C back to topprotein sequence of rna9871 >rna9871-protein ID=rna9871-protein|Name=rna9871|organism=Nannochloropsis gaditana|type=polypeptide|length=206bp
MPNIRCLLTVVIYVYLTTLAASAFLPSHTITSPSVASFAEVSSKCGRLST
KLEASQRETNFGATRRRILTGYFSKGLVSAAALQVLSFPSPTIAATNKTA
IAAYVSQIESGYKELKTMYKEEWASTKAKGGDEVRRRLGIVGTKSPLFRI
DKAIKAVQNALLEGDLGEDVSGGVEARKRKRGVQRGWAACKRLNTQFSFI
MGGGAS back to topmRNA from alignment at KK037257.1:18707..21341+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9871 ID=rna9871|Name=rna9871|organism=Nannochloropsis gaditana|type=mRNA|length=2635bp|location=Sequence derived from alignment at KK037257.1:18707..21341+ (Nannochloropsis gaditana)
TTCGTCACAGTTCAGGCAGAACGAGCGATCTCTCCAGCACCCAGCTTCAC
TCTCCCGCGACTTTTGTGCAATAAGCTAGGGTTTCCTCCAACGAAATAGC
TCTGCTGGAGAAATGCCAAATATAAGGTGTTTGCTGACTGTTGTAATCTA
TGTTTACCTCACAACATTGgctgcctccgccttccttccctcccacacta
TAACCTCGCCGTCCGTAGCGTCTTTTGCGGAGGTCAGTTCCAAATGCGGA
CGCCTTTCAACAAAACTGGAAGCCAGTCAAAGAGAAACAAATTTTGGAGC
CACGCGTCGCCGTATACTTACCGGGTACTTCTCAAAAGGGCTCGTCAGCG
CGGCGGCTCTTCAAGTGCTCTCTTTTCCATCCCCAACCATCGCGGCCACG
AATAAGACAGCGATAGCCGCTTATGTTTCTCAGGTATGAGGGAGCAGAAA
GTTTTGGGAGGGAGTAAAAGCATAGCTAGCTAGAATTACTGAAGAGCAAT
ACGGTTGCAGATGGGCTTCCAAGATGCAAAAGCAGCAAGTTTCAAGGAGA
GGATAGTTTAGACTTTGTGAGAGAATTCTTTCTGCAACGTTTCACTCGAC
TTCTTGATCAGGGGTGGTTCCCATGGATCCTTGGCAATGCCTAAtctcat
ttttccttcctctcatAATGTCCTCACCATATTTTATCTTGCGCGTTTGc
tgttcctctttcctttccctgatACCTCAGATAGAGTCGGGCTACAAGGA
GTTAAAAACCATGTACAAGGTGTGTATGTGATCAAACATGAGAAGCAAGA
AACCGAGAAGCTTCCTCTTCTGTCCGCACGAATGACATGTCGAACTTTGA
AGACTGGGCTCTGGACAATTTCGAGAGCCGCCTCCGTTCATCACCCATAT
CCGTGCCCAAATCTCTTGTGCCATCATTAGTTTACTATTATCTTGCTCAA
GATGTCAACCCATATcgcattcctcccttttgccCATCATACCCCTCTca
atcctcgtcctcgtccctgctACTCCTTTTCAGGAGGAGTGGGCATCCAc
caaggccaagggaggagacgaggtgcGCCGACGGCTCGGTGAGTGagtag
gaggaagggagggaggaggcaagaggggAGTGCGGAAAGTGAAATTTAAT
GCCTCGGATGCCTTCAGGGATGCCACGGgttggcgagggagaggaaggtc
tCGGAACTGTGATCACTCGCACGTCGAGGCATCCCTTCAGTGACGCTCCG
CGAGACAAAGCTCAAAATTCGAGTCCTTCGTGTTTTGGCCCCCACATCTG
GCCAGTCTACTCCTACGTGTGGGTAGCCGCTCTAATCTTGCGTGACTTTC
ACGAGGTCATCGTCTGCTTGTGCCTCGACCTCTCTTcaaccctcttttcc
ccttctcgcatcctccctttgtcctcgctcccgcagGCATCGTGGGTACA
AAGAGTCCCCTATTCCGCATCGACAAGGCAATCAAGGCGGTGCAAAACGC
CCTCCTCGAGGGGGATTTGGGGGAGGATGTAAgcgggggggtggaggcga
ggaaaaggaaaagaggggtcCAGAGAGGATGGGCGGCTTGCAAAAGGCTC
AATACCCAGTTTAGCTTTAtcatgggggggggggcttcgTAAAAGGCGTC
CGAGCCCTTCCGTGTTGACAGGTCCCTTCTAGGCCGTCCTGTTGTCGCAT
CCTGTCGACGCTTTGCCGAGCCCTGCTGCCCGTTGGTGCGGCCACTATCC
ACTTAAGGAATTGACTCCGTCTGTCTttctctcgccctcctcttcccctc
ttgtCAGGTCGGAGACGTGCTGGATTTCGTGGATGCCTCCCAGCGCGTCT
TGGACGGCATCAAGAACGCGGACTTCCTCGGTAAGAAAGGACGGAAGGTG
GCAATGACGGTGGAAGGACGAAATGAGTGTATCGAGCTTTATTGGATGTA
TGAGAATGGGAATGCATGAAGAAGATCATAAACAGAAGCGAATGGGTTGT
GACGGTGCtggtgaaaggaggaagggtggacaTCATAGATTTTCAAGGTG
ACATGCATAACCGTTTGCTTCATTAAAGAAAAGTAGAGTTCGGGAAGTTG
GCAAAAGtagaaagtgaaggaagaatAGATGCGAGCTTGTGCAAAAATGA
AACGGGAGAGGCAAGAAGGTTGACATGTTGTGATAACCCGTGTAAGTCTT
GTCCCTATCTCACCCATCGAATTATTTGTTAAACCCACCATTCTGTGGGT
GGTTTTCACACTTACAGCTTACAGCAATAATTTCGCTTCATTTGGAAACG
GAGGGGGTGCACTGGATTTCATGGAACAGAGCCACGAAGCCATGACACCA
GCCTTGGAAGCATTTGAAGACATGATGGATATTTTGCGTTTGCCAAAGTA
GACAGCGTGCGAGCAATTAcgagcaccaccagcactATGCGTTGAGAAAT
CGAAAAAGAGCGTTGGCCGCCGAATGTGATTTTGAAAGAGATTTGCTCAC
AAGTATGACATGGAAAAGCAATTTTACAAATTTTGTGGCTTTGGCCTGAT
CATCGGACAGTTTCGATGTTCGAGATCGGATCTTTGACTCGCGGCGGCTG
CGGGGATAAATTAAAACAAGTGCAGACCTTTATTA back to topCoding sequence (CDS) from alignment at KK037257.1:18707..21341+ >rna9871 ID=rna9871|Name=rna9871|organism=Nannochloropsis gaditana|type=CDS|length=2484bp|location=Sequence derived from alignment at KK037257.1:18707..21341+ (Nannochloropsis gaditana)
ATGCCAAATATAAGGTGTTTGCTGACTGTTGTAATCTATGTTTACCTCAC
AACATTGgctgcctccgccttccttccctcccacactaTAACCTCGCCGT
CCGTAGCGTCTTTTGCGGAGGTCAGTTCCAAATGCGGACGCCTTTCAACA
AAACTGGAAGCCAGTCAAAGAGAAACAAATTTTGGAGCCACGCGTCGCCG
TATACTTACCGGGTACTTCTCAAAAGGGCTCGTCAGCGCGGCGGCTCTTC
AAGTGCTCTCTTTTCCATCCCCAACCATCGCGGCCACGAATAAGACAGCG
ATAGCCGCTTATGTTTCTCAGATAGAGTCGGGCTACAAGGAGTTAAAAAC
CATGTACAAGGAGGAGTGGGCATCCAccaaggccaagggaggagacgagg
tgcGCCGACGGCTCGGCATCGTGGGTACAAAGAGTCCCCTATTCCGCATC
GACAAGGCAATCAAGGCGGTGCAAAACGCCCTCCTCGAGGGGGATTTGGG
GGAGGATGTAAgcgggggggtggaggcgaggaaaaggaaaagaggggtcC
AGAGAGGATGGGCGGCTTGCAAAAGGCTCAATACCCAGTTTAGCTTTAtc
atgggggggggggcttcgTAAATGCCAAATATAAGGTGTTTGCTGACTGT
TGTAATCTATGTTTACCTCACAACATTGgctgcctccgccttccttccct
cccacactaTAACCTCGCCGTCCGTAGCGTCTTTTGCGGAGGTCAGTTCC
AAATGCGGACGCCTTTCAACAAAACTGGAAGCCAGTCAAAGAGAAACAAA
TTTTGGAGCCACGCGTCGCCGTATACTTACCGGGTACTTCTCAAAAGGGC
TCGTCAGCGCGGCGGCTCTTCAAGTGCTCTCTTTTCCATCCCCAACCATC
GCGGCCACGAATAAGACAGCGATAGCCGCTTATGTTTCTCAGATAGAGTC
GGGCTACAAGGAGTTAAAAACCATGTACAAGGAGGAGTGGGCATCCAcca
aggccaagggaggagacgaggtgcGCCGACGGCTCGGCATCGTGGGTACA
AAGAGTCCCCTATTCCGCATCGACAAGGCAATCAAGGCGGTGCAAAACGC
CCTCCTCGAGGGGGATTTGGGGGAGGATGTAAgcgggggggtggaggcga
ggaaaaggaaaagaggggtcCAGAGAGGATGGGCGGCTTGCAAAAGGCTC
AATACCCAGTTTAGCTTTAtcatgggggggggggcttcgTAAATGCCAAA
TATAAGGTGTTTGCTGACTGTTGTAATCTATGTTTACCTCACAACATTGg
ctgcctccgccttccttccctcccacactaTAACCTCGCCGTCCGTAGCG
TCTTTTGCGGAGGTCAGTTCCAAATGCGGACGCCTTTCAACAAAACTGGA
AGCCAGTCAAAGAGAAACAAATTTTGGAGCCACGCGTCGCCGTATACTTA
CCGGGTACTTCTCAAAAGGGCTCGTCAGCGCGGCGGCTCTTCAAGTGCTC
TCTTTTCCATCCCCAACCATCGCGGCCACGAATAAGACAGCGATAGCCGC
TTATGTTTCTCAGATAGAGTCGGGCTACAAGGAGTTAAAAACCATGTACA
AGGAGGAGTGGGCATCCAccaaggccaagggaggagacgaggtgcGCCGA
CGGCTCGGCATCGTGGGTACAAAGAGTCCCCTATTCCGCATCGACAAGGC
AATCAAGGCGGTGCAAAACGCCCTCCTCGAGGGGGATTTGGGGGAGGATG
TAAgcgggggggtggaggcgaggaaaaggaaaagaggggtcCAGAGAGGA
TGGGCGGCTTGCAAAAGGCTCAATACCCAGTTTAGCTTTAtcatgggggg
gggggcttcgTAAATGCCAAATATAAGGTGTTTGCTGACTGTTGTAATCT
ATGTTTACCTCACAACATTGgctgcctccgccttccttccctcccacact
aTAACCTCGCCGTCCGTAGCGTCTTTTGCGGAGGTCAGTTCCAAATGCGG
ACGCCTTTCAACAAAACTGGAAGCCAGTCAAAGAGAAACAAATTTTGGAG
CCACGCGTCGCCGTATACTTACCGGGTACTTCTCAAAAGGGCTCGTCAGC
GCGGCGGCTCTTCAAGTGCTCTCTTTTCCATCCCCAACCATCGCGGCCAC
GAATAAGACAGCGATAGCCGCTTATGTTTCTCAGATAGAGTCGGGCTACA
AGGAGTTAAAAACCATGTACAAGGAGGAGTGGGCATCCAccaaggccaag
ggaggagacgaggtgcGCCGACGGCTCGGCATCGTGGGTACAAAGAGTCC
CCTATTCCGCATCGACAAGGCAATCAAGGCGGTGCAAAACGCCCTCCTCG
AGGGGGATTTGGGGGAGGATGTAAgcgggggggtggaggcgaggaaaagg
aaaagaggggtcCAGAGAGGATGGGCGGCTTGCAAAAGGCTCAATACCCA
GTTTAGCTTTAtcatgggggggggggcttcgTAA back to top
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