EWM20833.1, cds9840 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM20833.1 vs. NCBI_GenBank
Match: gi|585100758|gb|EWM20833.1| (hypothetical protein Naga_100524g2 [Nannochloropsis gaditana]) HSP 1 Score: 419.468 bits (1077), Expect = 1.824e-148 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0 Query: 1 MPNIRCLLTVVIYVYLTTLAASAFLPSHTITSPSVASFAEVSSKCGRLSTKLEASQRETNFGATRRRILTGYFSKGLVSAAALQVLSFPSPTIAATNKTAIAAYVSQIESGYKELKTMYKEEWASTKAKGGDEVRRRLGIVGTKSPLFRIDKAIKAVQNALLEGDLGEDVSGGVEARKRKRGVQRGWAACKRLNTQFSFIMGGGAS 206 MPNIRCLLTVVIYVYLTTLAASAFLPSHTITSPSVASFAEVSSKCGRLSTKLEASQRETNFGATRRRILTGYFSKGLVSAAALQVLSFPSPTIAATNKTAIAAYVSQIESGYKELKTMYKEEWASTKAKGGDEVRRRLGIVGTKSPLFRIDKAIKAVQNALLEGDLGEDVSGGVEARKRKRGVQRGWAACKRLNTQFSFIMGGGAS Sbjct: 1 MPNIRCLLTVVIYVYLTTLAASAFLPSHTITSPSVASFAEVSSKCGRLSTKLEASQRETNFGATRRRILTGYFSKGLVSAAALQVLSFPSPTIAATNKTAIAAYVSQIESGYKELKTMYKEEWASTKAKGGDEVRRRLGIVGTKSPLFRIDKAIKAVQNALLEGDLGEDVSGGVEARKRKRGVQRGWAACKRLNTQFSFIMGGGAS 206
BLAST of EWM20833.1 vs. NCBI_GenBank
Match: gi|553186227|ref|XP_005854382.1| (hypothetical protein NGA_0207500 [Nannochloropsis gaditana CCMP526] >gi|422294676|gb|EKU21976.1| hypothetical protein NGA_0207500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 106.301 bits (264), Expect = 5.584e-26 Identity = 60/89 (67.42%), Postives = 63/89 (70.79%), Query Frame = 0 Query: 120 KEEWASTKAKGGDEVRRRLGIVGTKSPLFRIDKAIKAVQNALLEGDLGEDVSGGVEARKRKRGVQRGWAACKRL---NTQFSFIMGGGA 205 EEWASTKAKGGDEVRRRLGIVGTKSPLFRIDKAIKAVQNALLEGDLGEDV ++ + V G L N SF GGGA Sbjct: 13 HEEWASTKAKGGDEVRRRLGIVGTKSPLFRIDKAIKAVQNALLEGDLGEDVGDVLDFVDASQRVLDGIKNADFLAYSNNFASFGNGGGA 101
BLAST of EWM20833.1 vs. NCBI_GenBank
Match: gi|873218604|emb|CEM39206.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 70.8626 bits (172), Expect = 2.215e-11 Identity = 59/164 (35.98%), Postives = 84/164 (51.22%), Query Frame = 0 Query: 21 ASAFLPSHTITSPSV--------ASFAEVSSKCGRLSTKLEASQRETNFGATRRRILTGYFSKGLVSAAALQVLSFPSPTIAATNKTAIAA----------YVSQIESGYKELKTMYKEEWASTKAKG-GDEVRRRLGIVGTKSPLFRIDKAIKAVQNALLEGD 165 A AF PSH +SP V A ++SS RLS + + RR GL +A L +LS P +A T ++A+A Y+++I++GY LK + ++W + AKG GD VRR LG VGT SPLF+I++A + V AL +GD Sbjct: 18 AMAFHPSHMPSSPGVSISPGQHPARRPQLSSTT-RLSALIRRRDDDQAEAVLDRRSALVTAQVGL-AALVLPLLSIGGPALAVT-RSALAGDVPRGAPALEYIARIQNGYLALKELL-DKWGTVAAKGDGDAVRRYLGTVGTYSPLFQINRAFEGVLQALSKGD 177 The following BLAST results are available for this feature:
BLAST of EWM20833.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|