|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101681g2.4001.mrna |
| Orig protein id | gnl|cribi|Naga_101681g2.4001 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037256.1 | supercontig | KK037256.1:289951..290709 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9862 ID=rna9862|Name=rna9862|organism=Nannochloropsis gaditana|type=mRNA|length=1045bp
GACTTCCGTGAAAAGCAACAGGGCTGTGCTATGACACGGACGAAAGGGTG
GAATGGCGCATAGGTGTGGTGAGCAGGATGATTGAGGACTTTGGGAAGAG
GGGTGTAAGACGCCGGGGGGTTAAGTATCCTCATCTAAAGCGAGGTTCAG
AAGTGCAACGATGCCTGAATTAATTCTACACGGCTTACGTCCTTCATCGT
TCCTATCGCGTTGCTCCTATGGATGGGTGGCACTACAGTGTAAGGCTTTC
AATGGCGTAGGTGGCGTGATTGGAATTATTTTCAGAACGGCAGCGGTCTA
CCCAGAATGCGATCACCCTTGTACCCCCCGATTAAACTAGGGTCAGTGAC
CTATGAATGATTCTCGTCCTCCTCCTTTTTTTTCAAGAGGTTTGGTACAC
ATAGGAGAGAAACGCAGGGGGCGATGGGATTGGGATGGAGGAAAAGGAGT
TCGACAGGACTTTCAAAGGGTTTTGTCGGGGTAGGGCCAGGAGGCTCAGG
ATCAAGAAAAAGCGTACAGCGCAATGTCACACCCTTTCTTAAAAACGAAA
GAGCCACTGGTGAAATTGCCAGCCTTCCGACTGAAAAGGAAACGAAATGC
ATGTAGAGCGACGGAGAAAAGCGAACTTGGTCCACTTTTGGTGTCTTTTT
GGGGGGTGAATTTAACACCAGGCACCTCCCTAAGCATTCCCTCCTGGACG
GTTGCAACGCAAGTCACCACAAGAAAAAGAAGGAGAAAGGAGGGAACGGT
GGACGAGGAAGGGGCGTGGAGGAAGGGGGAGAAGGAGAGGGGGAGCGAAG
GGTCGGTCCCTGGTAAGGTGCACGGGCCTACTCCTCCTCCTCCTCGTCCA
TAGGAACCACCCGCCGGCGCCTCATTACCTTCCCTCCTCCATCATGGTCC
TCTATTTCTCTCGATTCTTTCCTTCTCCTTGCCGCGGCCGTTCTTCCTCT
TCCTTCGCGCGCGGATCCATTCGCTGCCCGGCGTCCTCCCTCCCTCCTAT
CCCCCTCCATTCCATCCCCCGCCCTCACCTCCTTCCCCTCTCCGT back to topprotein sequence of rna9862 >rna9862-protein ID=rna9862-protein|Name=rna9862|organism=Nannochloropsis gaditana|type=polypeptide|length=123bp
MGAEEGGKPVHGTPPVDGNTAVGATVGYDGHNESRHQASLPGLPARQVPS
GREERKEGMKAESTLGNRDVLVCSEMLGEAEPYGWNGGRGGGREEGREGC
RPSGGGEGGREGGKEGGQHVSLW back to topmRNA from alignment at KK037256.1:289951..290709+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9862 ID=rna9862|Name=rna9862|organism=Nannochloropsis gaditana|type=mRNA|length=759bp|location=Sequence derived from alignment at KK037256.1:289951..290709+ (Nannochloropsis gaditana)
GCCACCTACGCCATTGAAAGCCTTACACTGTAGTGCCACCCATCCATAGG
AGCAACGCGATAGGAACGATGAAGGACGTAAGCCGTGTAGAATTAATTCA
GGCATCGTTGCACTTCTGAACCTCGCTTTAGATGAGGATACTTAACCCCC
CGGCGTCTTACACCCCTCTTCCCAAAGTCCTCAATCATCCTGCTCACCAC
ACCTATGCGCCATTCCACCCTTTCGTCCGTGTCATAGCACAGCCCTGTTG
CTTTTCACGGAAGTCTGGCCACCTGACACGATCGGATCACGGTGCCTGGA
GGCATTAAAGGGTTGAGGGGCGGGCTGGCATCAGGGGGGAGGTAATCGAA
GCCTCCCGGCACAGAGGGCATCGCCCTCAAAAACTCAACGATGGGcgcgg
aagaaggagggaaaccTGTGCATGGCACGCCTCCCGTGGACGGCAACACT
GCCGTGGGTGCAACGGTGGGCTACGACGGGCATAACGAATCGAGGCATCA
AGCATCTTTGCCAGGGCTGCCGGCCCGACAGGTGCcctcagggagggagg
aaaggaaggaaggaatgaaggCCGAGAGCACTCTCGGAAACAGAGACGTA
TTGGTATGCTCTGAGATGTTGGGGGAGGCAGAGCCTTACGGGTggaacgg
aggaaggggagggggaagggaagaagggagggagggttgccGCccgagtg
gagggggggaaggagggagggaaggagggaaggagggaggccagcatGTG
TCCCTGTGG back to topCoding sequence (CDS) from alignment at KK037256.1:289951..290709+ >rna9862 ID=rna9862|Name=rna9862|organism=Nannochloropsis gaditana|type=CDS|length=369bp|location=Sequence derived from alignment at KK037256.1:289951..290709+ (Nannochloropsis gaditana)
ATGGGcgcggaagaaggagggaaaccTGTGCATGGCACGCCTCCCGTGGA
CGGCAACACTGCCGTGGGTGCAACGGTGGGCTACGACGGGCATAACGAAT
CGAGGCATCAAGCATCTTTGCCAGGGCTGCCGGCCCGACAGGTGCcctca
gggagggaggaaaggaaggaaggaatgaaggCCGAGAGCACTCTCGGAAA
CAGAGACGTATTGGTATGCTCTGAGATGTTGGGGGAGGCAGAGCCTTACG
GGTggaacggaggaaggggagggggaagggaagaagggagggagggttgc
cGCccgagtggagggggggaaggagggagggaaggagggaaggagggagg
ccagcatGTGTCCCTGTGG back to top
|