EWM20842.1, cds9831 (CDS) Nannochloropsis gaditana

Overview
NameEWM20842.1
Unique Namecds9831
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:290341..290709 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20842.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101681g2.4001.mrna
GbkeyCDS
End range.
End range290709
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:290341..290709 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20842.1 vs. NCBI_GenBank
Match: gi|585100773|gb|EWM20842.1| (hypothetical protein Naga_101681g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 239.195 bits (609), Expect = 7.898e-80
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0 
Query:    1 MGAEEGGKPVHGTPPVDGNTAVGATVGYDGHNESRHQASLPGLPARQVPSGREERKEGMKAESTLGNRDVLVCSEMLGEAEPYGWNGGRGGGREEGREGCRPSGGGEGGREGGKEGGQHVSLW 123
            MGAEEGGKPVHGTPPVDGNTAVGATVGYDGHNESRHQASLPGLPARQVPSGREERKEGMKAESTLGNRDVLVCSEMLGEAEPYGWNGGRGGGREEGREGCRPSGGGEGGREGGKEGGQHVSLW
Sbjct:    1 MGAEEGGKPVHGTPPVDGNTAVGATVGYDGHNESRHQASLPGLPARQVPSGREERKEGMKAESTLGNRDVLVCSEMLGEAEPYGWNGGRGGGREEGREGCRPSGGGEGGREGGKEGGQHVSLW 123
The following BLAST results are available for this feature:
BLAST of EWM20842.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100773|gb|EWM20842.1|7.898e-80100.00hypothetical protein Naga_101681g2, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9862rna9862Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications