rna9858, rna9858 (mRNA) Nannochloropsis gaditana

Overview
Namerna9858
Unique Namerna9858
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1011
Alignment locationKK037256.1:280217..280932 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100496g2.5229.mrna
Orig protein idgnl|cribi|Naga_100496g2.5229
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:280217..280932 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100496g2gene9570Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9858rna9858-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20848.1cds9827Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9858 ID=rna9858|Name=rna9858|organism=Nannochloropsis gaditana|type=mRNA|length=1011bp
ATGGATTTCAGCGCCTACGGCTTTTTTGCCGAAGAGATCGGCCAGGCATT
CTTCCCTCCTTCCACCTCTTCCACCGTTCGGCTCATCCGATCCTTCGCCG
TCTTTTCTGGTGCTTTTTTATTCCGTCCAATCGGCGGCCTTTTTTTCGGG
TGGCTGGGAGACACTTACAGCAAGAAACACGCCCTCGTTTTGTCCCTCTC
CCTGATGGCCCTGGCCACCACAGGCGTCGGTTTCCTCCCCCCCTACTCCT
CGATTCACATACTTTCTCCTATCCTGCTTACCCTGCTTCGTCTCCTGCAA
GGCTTTTCAGTGGGCGGGCAACTCGTCGGCACCATGGTTTTCGTCGCACA
CCATGCCTTCCAGCCCCCTCCGCCCCTTCCCTCAAGCTCTTCCTCTGGTT
CATCGCCCTTCCGTCCCTCTCCCCCTCCATCCTCCCTGCAAGGATTCTAC
GGGGACCTTCGGGCCAGTAGCACTGAAGGCCAGCATCTTGCGGTCGATTT
GGTGGCTCCGTCTCCTCTGCCCCCCACCGGGTCTCCCCATGCGGACGTCG
GTCCACCGTCGGGCATTTCCACCCAGGCGGCCCCGAGGGATAAAGACCGA
GAGGACAGGGAGGAAGACGAGAACCCTATCGGAGCCGTTTTTCACGAGCA
CTTGCTCGAGATTGTCCTGGGCATAGGGGTGACAGCTCTGTGGTGCGGAG
GCGTCTACCAATGCTACATCTGGATGCCCACCTACCTGACCGTGCTGGCC
CCGCACGCTCCGGTTCCGGCCTTGTTCGGGGGAACGGTCAGCGTCGTGGC
CACGGCGCTGGTGAAGACGAACGGGGGCCTGGGGCCCGAATGGCTCTTGA
TGGGGACGGCCTTGTTGTCCTCCGGGTGCCTGGTCATGGGCTGGAGGCCC
ACTGGCATCGTCGCTCGGCGAAAACGGAGAGGACGGAACGCGTGGAAGGC
GCTAATGCTTGCCATGAAGAGCATGGCGACCACATGCCCTGCGGCGAGGG
CGGAGGTCTAG
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protein sequence of rna9858

>rna9858-protein ID=rna9858-protein|Name=rna9858|organism=Nannochloropsis gaditana|type=polypeptide|length=107bp
MTYPSFLANLWSGFFSVGSSQEKQTGDSVADVLPVDFKVDSLNTSMTTTP
QGRLRGSSNMKEGKSPFLREAASPCLDEQERMDVESGKDNRHTTLVRQAR
LIAHMEA
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mRNA from alignment at KK037256.1:280217..280932-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9858 ID=rna9858|Name=rna9858|organism=Nannochloropsis gaditana|type=mRNA|length=716bp|location=Sequence derived from alignment at KK037256.1:280217..280932- (Nannochloropsis gaditana)
ATGACATACCCGTCCTTTCTCGCGAACTTGTGGAGTGGATTCTTTAGTGT
AGGGAGCAGTCAAGAAAAGCAGACTGGTGATTCTGTCGCAGATGTCCTGC
CCGTCGACTTCAAGGTAGACAGCTTGAACACGAGCATGACTACAACTCCA
CAAGGCAGGTTGCGTGGATCCTCCAACATGAAAGAAGGGTACGTGACAAT
GACATCGCGCATAAGAAAGGAAACAGATTTTTTCAGGACCCTGACAACTT
GACACGATTAACTTCAATCGCGGAAGATAAAGAGTAAAGCTTGTCACTTT
CATAATGTGATACGTTCCCCGTCAAACCACCCGTCATCCTCTTTCTCTTG
CCCATTCCTGGCTCGCTCACAGCAAGAGCCCATTCCTTCGCGAAGCTGCT
TCCCCGTGCCTGGATGAACAAGAGCGGATGGACGTAGAATCAGGCAAAGA
CAACCGTCATACAACCCTCGTGAGGCAAGCTCGCTTGATTGCTCATATGG
AAGTGCGAGATGCGGAGGCTTCTGCCTACGTTGCACGTCGAGGCCGTCTG
CCTCACCTTCGACAGCGCGCACTTCAACGACGTCTATTTTGCTGCGTCCT
CGCCATGCCCTGTCTCTTCCTTGGCTGGATGACCATCCCCTTCGCCGTTT
CTACTACCGAAGAGAGCGCTTACTTAATGACATATCTATGCACGGGACTG
TTCCTGGCAGGCGTAG
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Coding sequence (CDS) from alignment at KK037256.1:280217..280932-

>rna9858 ID=rna9858|Name=rna9858|organism=Nannochloropsis gaditana|type=CDS|length=972bp|location=Sequence derived from alignment at KK037256.1:280217..280932- (Nannochloropsis gaditana)
GCGTAGCAAGAGCCCATTCCTTCGCGAAGCTGCTTCCCCGTGCCTGGATG
AACAAGAGCGGATGGACGTAGAATCAGGCAAAGACAACCGTCATACAACC
CTCGTGAGGCAAGCTCGCTTGATTGCTCATATGGAAATGACATACCCGTC
CTTTCTCGCGAACTTGTGGAGTGGATTCTTTAGTGTAGGGAGCAGTCAAG
AAAAGCAGACTGGTGATTCTGTCGCAGATGTCCTGCCCGTCGACTTCAAG
GTAGACAGCTTGAACACGAGCATGACTACAACTCCACAAGGCAGGTTGCG
TGGATCCTCCAACATGAAAGAAGGGCGTAGCAAGAGCCCATTCCTTCGCG
AAGCTGCTTCCCCGTGCCTGGATGAACAAGAGCGGATGGACGTAGAATCA
GGCAAAGACAACCGTCATACAACCCTCGTGAGGCAAGCTCGCTTGATTGC
TCATATGGAAATGACATACCCGTCCTTTCTCGCGAACTTGTGGAGTGGAT
TCTTTAGTGTAGGGAGCAGTCAAGAAAAGCAGACTGGTGATTCTGTCGCA
GATGTCCTGCCCGTCGACTTCAAGGTAGACAGCTTGAACACGAGCATGAC
TACAACTCCACAAGGCAGGTTGCGTGGATCCTCCAACATGAAAGAAGGGC
GTAGCAAGAGCCCATTCCTTCGCGAAGCTGCTTCCCCGTGCCTGGATGAA
CAAGAGCGGATGGACGTAGAATCAGGCAAAGACAACCGTCATACAACCCT
CGTGAGGCAAGCTCGCTTGATTGCTCATATGGAAATGACATACCCGTCCT
TTCTCGCGAACTTGTGGAGTGGATTCTTTAGTGTAGGGAGCAGTCAAGAA
AAGCAGACTGGTGATTCTGTCGCAGATGTCCTGCCCGTCGACTTCAAGGT
AGACAGCTTGAACACGAGCATGACTACAACTCCACAAGGCAGGTTGCGTG
GATCCTCCAACATGAAAGAAGG
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Synonyms
Publications