EWM20848.1, cds9827 (CDS) Nannochloropsis gaditana

Overview
NameEWM20848.1
Unique Namecds9827
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:280745..280932 -
Alignment locationKK037256.1:280431..280560 -
Alignment locationKK037256.1:280217..280222 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20848.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100496g2.5229.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:280745..280932 -
KK037256.1supercontigKK037256.1:280431..280560 -
KK037256.1supercontigKK037256.1:280217..280222 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20848.1 vs. NCBI_GenBank
Match: gi|585100784|gb|EWM20848.1| (hypothetical protein Naga_100496g2 [Nannochloropsis gaditana])

HSP 1 Score: 224.557 bits (571), Expect = 1.765e-74
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0 
Query:    1 MTYPSFLANLWSGFFSVGSSQEKQTGDSVADVLPVDFKVDSLNTSMTTTPQGRLRGSSNMKEGKSPFLREAASPCLDEQERMDVESGKDNRHTTLVRQARLIAHMEA 107
            MTYPSFLANLWSGFFSVGSSQEKQTGDSVADVLPVDFKVDSLNTSMTTTPQGRLRGSSNMKEGKSPFLREAASPCLDEQERMDVESGKDNRHTTLVRQARLIAHMEA
Sbjct:    1 MTYPSFLANLWSGFFSVGSSQEKQTGDSVADVLPVDFKVDSLNTSMTTTPQGRLRGSSNMKEGKSPFLREAASPCLDEQERMDVESGKDNRHTTLVRQARLIAHMEA 107
The following BLAST results are available for this feature:
BLAST of EWM20848.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100784|gb|EWM20848.1|1.765e-74100.00hypothetical protein Naga_100496g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9858rna9858Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications