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Properties
| Property Name | Value |
|---|
| Product | peptidyl-trna hydrolase pth2 domain-containing protein |
| Orig transcript id | gnl|cribi|Naga_100514g3.5676.mrna |
| Orig protein id | gnl|cribi|Naga_100514g3.5676 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037256.1 | supercontig | KK037256.1:268688..270089 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9854 ID=rna9854|Name=rna9854|organism=Nannochloropsis gaditana|type=mRNA|length=1085bp
CCACGCAAAATGGGGACGAGATTATCCAGACTTGGGCAGAAGACGAATCG
CTTACCTCGCATTAAACACCAAGCGCCTTGCACACCCTTTTTTACCTCCT
TTCTTTTCCTAGGCAGCCCGTTTATAGGATTCGGAATGCCTCGCAAGGCA
TGGCCCCAGGCTTTTGGTCGGTCATTTTGCGAACGCTAAGTGCATGTACA
CGCACGGAAAATGCGCTTTGACAGTCAATATTCGCACCGATTATGTATTC
ATGAGTTCTTTCAACAATATTATGCCTTAGGGGTGCCGTAGGGGCGGAGC
AGGGTAAAGTGACTGTGGCTGATACCCAGAGGCCTCCAGACTAGTAGCCC
TGATGGCGCTTGAGGCCTGTTCTGGCATTCTTTCCTCCGCATCTACAGCA
TTTCGAGAAGCAAGCTCCACGACCCCGGGATGGATCGTCTTTCTCTCATT
TGGTGCAGGGGCGCTTGTCAGCAGCTTTCTACCAAGCATGCGAAAGACGG
GAAGAAGAAAAAGAGGCCGGCAGTGGCCCTCAGAGGCCTTGGAGGAGGAA
GCGGACGAAGGCAGTGACAGCGAGAGAAGCGACACAGAGGAGTCTGCTGA
TGGAATCACCAGTGCTAAGACGATTCGGGATTTTTCTCTGGTATCTGGCC
CATTCAAAATGGTATTGTGTGTGAACATGGAGCTTTCGATGGGCAAAGGC
AAGATCGCCGCTCAGTGCGGGCACGCGACGTTGGGAGCGTACAAACGGGC
ACGTCGACTGGCTCCCAGGACTCTGCAAGGGTGGGAATACATGGGGCAAA
AATCTGCCTCAAAGTCCCCGATCAGGTGGAGCTGGAGCGGCTCCGTGTCC
TGGTTACTAAGGCGCAGTTGATCTCCTATCAGGTCGAAGACGCTGGCCGG
ACGCAGATTGCAGCCGGCTCTCAGACAGTTTTGGCCATCGGACCCGCCCC
CGTCCAAGAAATCGACCGCATCACGGGGCACCTCAAACTGTTGTAGGCCA
CGCTTTCTGCTCTTGTCAAGGGAAAGGAAAGCCATAAATCGAGGGCAGGG
ATGACCAAATCAAGCATGGCGTCGGTCGCGTACCT back to topprotein sequence of rna9854 >rna9854-protein ID=rna9854-protein|Name=rna9854|organism=Nannochloropsis gaditana|type=polypeptide|length=215bp
MALEACSGILSSASTAFREASSTTPGWIVFLSFGAGALVSSFLPSMRKTG
RRKRGRQWPSEALEEEADEGSDSERSDTEESADGITSAKTIRDFSLVSGP
FKMVLCVNMELSMGKGKIAAQCGHATLGAYKRARRLAPRTLQGWEYMGQA
KICLKVPDQVELERLRVLVTKAQLISYQVEDAGRTQIAAGSQTVLAIGPA
PVQEIDRITGHLKLL back to topmRNA from alignment at KK037256.1:268688..270089- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9854 ID=rna9854|Name=rna9854|organism=Nannochloropsis gaditana|type=mRNA|length=1402bp|location=Sequence derived from alignment at KK037256.1:268688..270089- (Nannochloropsis gaditana)
CCACGCAAAATGGGGACGAGATTATCCAGACTTGGGCAGAAGACGAATCG
CTTACCTCGCATTAAACACCAAGCGCCTTGCACACCCTTTTTTACCTCCT
TTCTTTTCCTAGGCAGCCCGTTTATAGGATTCGGAATGCCTCGCAAGGCA
TGGCCCCAGGCTTTTGGTCGGTCATTTTGCGAACGCTAAGTGCATGTACA
CGCACGGAAAATGCGCTTTGACAGTCAATATTCGCACCGATTATGTATTC
ATGAGTTCTTTCAACAATATTATGCCTTAGGGGTGCCGTAGGGGCGGAGC
AGGGTAAAGTGACTGTGGCTGATACCCAGAGGCCTCCAGACTAGTAGCCC
TGATGGCGCTTGAGGCCTGTTCTGGCATTCTTTCCTCCGCATCTACAGCA
TTTCGAGAAGCAAGCTCCACGACCCCGGGATGGATCGTCTTTCTCTCATT
TGGTGCAGGGGCGCTTGTCAGCAGCTTTCTACCAAGCATGCGAAAGACGG
GAAGAAGAAAAAGAGGCCGGCAGTGGCCCTCAGAGGCCTTGGAGGAGGAA
GCGGACGAAGGCAGTGACAGCGAGAGAAGCGACACAGAGGAGTCTGCTGA
TGGAATCACCAGTGCTAAGACGATTCGGGATTTTTCTCTGGTATCTGGCC
CATTCAAAATGGTATTGTGTGTGAACATGGAGCTTTCGATGGGCAAAGGC
AAGATCGCCGCTCAGTGCGGGCACGCGACGTTGGGAGCGTACAAACGGGC
ACGTCGACTGGCTCCCAGGACTCTGCAAGGGTGGGAATACATGGGGTAGG
TGGTGTTGAGGCAGGGGGAACGGGACGCAAAGGAAAGAGGGCTTGGGAAG
GGCGGGAAGAAGGCAAGGAGACACAGCATGGTGGGAGGGAGCTTCGTCAC
CCGGCCCAGAGGGACGGCCTCGCTTGCGCTGGTACGCCAGGGACGCTGCA
TGCCCCTTCAAGAGCTGGTCGAGGCTTGCCAGAGCGTCCTTGACCCTCCA
TCTCGACCCCTGTCTCGTTCTTCCTAGTCCTTGTCTTTCCACGCCCTCCC
GTCTATCCTTTTTCTCTCTCACACACCCACACCCTCCAAACCCCTTTCCC
TTGTTTAGTCAGGCAAAAATCTGCCTCAAAGTCCCCGATCAGGTGGAGCT
GGAGCGGCTCCGTGTCCTGGTTACTAAGGCGCAGTTGATCTCCTATCAGG
TCGAAGACGCTGGCCGGACGCAGATTGCAGCCGGCTCTCAGACAGTTTTG
GCCATCGGACCCGCCCCCGTCCAAGAAATCGACCGCATCACGGGGCACCT
CAAACTGTTGTAGGCCACGCTTTCTGCTCTTGTCAAGGGAAAGGAAAGCC
ATAAATCGAGGGCAGGGATGACCAAATCAAGCATGGCGTCGGTCGCGTAC
CT back to topCoding sequence (CDS) from alignment at KK037256.1:268688..270089- >rna9854 ID=rna9854|Name=rna9854|organism=Nannochloropsis gaditana|type=CDS|length=1296bp|location=Sequence derived from alignment at KK037256.1:268688..270089- (Nannochloropsis gaditana)
TCAGGCAAAAATCTGCCTCAAAGTCCCCGATCAGGTGGAGCTGGAGCGGC
TCCGTGTCCTGGTTACTAAGGCGCAGTTGATCTCCTATCAGGTCGAAGAC
GCTGGCCGGACGCAGATTGCAGCCGGCTCTCAGACAGTTTTGGCCATCGG
ACCCGCCCCCGTCCAAGAAATCGACCGCATCACGGGGCACCTCAAACTGT
TGTAGATGGCGCTTGAGGCCTGTTCTGGCATTCTTTCCTCCGCATCTACA
GCATTTCGAGAAGCAAGCTCCACGACCCCGGGATGGATCGTCTTTCTCTC
ATTTGGTGCAGGGGCGCTTGTCAGCAGCTTTCTACCAAGCATGCGAAAGA
CGGGAAGAAGAAAAAGAGGCCGGCAGTGGCCCTCAGAGGCCTTGGAGGAG
GAAGCGGACGAAGGCAGTGACAGCGAGAGAAGCGACACAGAGGAGTCTGC
TGATGGAATCACCAGTGCTAAGACGATTCGGGATTTTTCTCTGGTATCTG
GCCCATTCAAAATGGTATTGTGTGTGAACATGGAGCTTTCGATGGGCAAA
GGCAAGATCGCCGCTCAGTGCGGGCACGCGACGTTGGGAGCGTACAAACG
GGCACGTCGACTGGCTCCCAGGACTCTGCAAGGGTGGGAATACATGGGTC
AGGCAAAAATCTGCCTCAAAGTCCCCGATCAGGTGGAGCTGGAGCGGCTC
CGTGTCCTGGTTACTAAGGCGCAGTTGATCTCCTATCAGGTCGAAGACGC
TGGCCGGACGCAGATTGCAGCCGGCTCTCAGACAGTTTTGGCCATCGGAC
CCGCCCCCGTCCAAGAAATCGACCGCATCACGGGGCACCTCAAACTGTTG
TAGATGGCGCTTGAGGCCTGTTCTGGCATTCTTTCCTCCGCATCTACAGC
ATTTCGAGAAGCAAGCTCCACGACCCCGGGATGGATCGTCTTTCTCTCAT
TTGGTGCAGGGGCGCTTGTCAGCAGCTTTCTACCAAGCATGCGAAAGACG
GGAAGAAGAAAAAGAGGCCGGCAGTGGCCCTCAGAGGCCTTGGAGGAGGA
AGCGGACGAAGGCAGTGACAGCGAGAGAAGCGACACAGAGGAGTCTGCTG
ATGGAATCACCAGTGCTAAGACGATTCGGGATTTTTCTCTGGTATCTGGC
CCATTCAAAATGGTATTGTGTGTGAACATGGAGCTTTCGATGGGCAAAGG
CAAGATCGCCGCTCAGTGCGGGCACGCGACGTTGGGAGCGTACAAACGGG
CACGTCGACTGGCTCCCAGGACTCTGCAAGGGTGGGAATACATGGG back to top
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