rna9851, rna9851 (mRNA) Nannochloropsis gaditana

Overview
Namerna9851
Unique Namerna9851
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1083
Alignment locationKK037256.1:265093..266323 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100514g1.5674.mrna
Orig protein idgnl|cribi|Naga_100514g1.5674
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:265093..266323 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100514g1gene9564Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9851rna9851-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20850.1cds9820Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9851 ID=rna9851|Name=rna9851|organism=Nannochloropsis gaditana|type=mRNA|length=1083bp
ATGAGATGGCGCCGGGACGCTACGCGACCCGGAGTACAAGGCTCCGAGGG
ACTTCAGCTCCACTTTCGTCAAATAATTTCGCCAGCGTGTGAGACCTCAA
CCCGCGTTCGAAAGTGGCAGATAAGATCAAAGTTTATGATCAAGGACATT
TTCTTTCCTTTTTTCTGTACCCTAGCCCTCTCCTTTCTGTCGTACCCCTC
CATTCCCGTCACCTTGGCCCAGTCAGTCTCAGGGACAATGGCGACGAATA
AACCCGTGCCCATGATAGGGAAGCCAGCTCCTGATATTACAGCCGAGGCC
GTCATGCCCGACGGCTCCTTCAAAGAGCTGTCGCTCAAGCAGTACAGGGG
CCGTTATGTGATTCTAGTGATGTACCCACTCGACTTCACTTTTGTCTGTC
CCTCGGAATTGATCGCCTTCTCTGACCGGATCCAGGAATTCCACGACCTG
AACGCCGACGTGGTGGGGCTCTCCGTCGACTCGAAGTACAGCCATTTGGC
ATGGAGCAAGAGCCCGCGCAAGGCGGGGGGTTTGGGTGGTTTCGAATTTC
CCCCTCATTTCGGATCTGACGAAAGAGATTGCCTGCGACTACGGGAAGGA
GTGGCCCTCCGGGGCCTCTTCATTATCGACCCCCACGGGATCCTCCGCCA
GATCACTATCAACGACCTGCCCATCGGTCGGGACGTGGACGAGACGCTCC
GCCTGGTGCAAGCCATCGACTTTGTTGACAAGCACGGCGAGGTCTGCCCC
GCGGGATGGAAGCCTGGAATGCGGACAATGAAGGCCGACCCGGTGGAGAG
CCTTGCCTACTTTCAGGCGGTAGCGGCGGAGCTGGAAGGGGGGGCAGTCA
AGAAGAGCTCGCCAGGGGTGAGCGTGAGAATGCGAGGGCGTGAAATAAAA
AGAAAGAGACAAAGCAAAGGAGGGAGTGAAGAGACGCCACGAGGGGAGGA
AGAGAGCGTGCAATACAGGGGCCGCGTGCGTTACGAGGAAAGAGAAAGAA
GGAGAAGACGACGCCTACGGGTAAAGAAGGCAGGGGCAAGGGAGGAGGGA
GAAGGGACAAAGGATCGACTGCAAAGGACATGA
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protein sequence of rna9851

>rna9851-protein ID=rna9851-protein|Name=rna9851|organism=Nannochloropsis gaditana|type=polypeptide|length=253bp
MRPLPAPEWRSLSVFKGRSHGRRFEEEKRTRGRGPNPKKCKMKPPSPREK
GLHPKQHLKGQQDEGYHCVCCRRRPHLALTSLPLASCVLLLLLPLLPLTW
GYPSYLLNPDGCRSQKLEVGFDIMGSPVVEEKAMKESPIVVLRGDTALHS
GSEYKSGETLSVKLEGRAGMYCMEVRGGAAMFSGGACDGTRVTEPDVLAL
PIGDKETLQTVTLHVGLASRYGPVTLLPPFVLHPPGKDSAAGKGERDGAF
LDR
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mRNA from alignment at KK037256.1:265093..266323-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9851 ID=rna9851|Name=rna9851|organism=Nannochloropsis gaditana|type=mRNA|length=1231bp|location=Sequence derived from alignment at KK037256.1:265093..266323- (Nannochloropsis gaditana)
ATGCGCCCCCTTCCGGCACCCGAATGGCGCAGTCTCAGCGTTTTCAAAGG
AAGAAGTCATGGTCGTCGATTCGAAGAGGAGAAAAGAACACGAGGGCGAG
GTCCGAATCCTAAGAAGTGCAAGATGAAGCCGCCGTCGCCACGGGAGAAA
GGATTGCATCCAAAGCAGCACTTAAAGGGGCAGCAAGACGAGGGGTATCA
CTGTGTCTGCTGCCGCCGTAGACCACACCTAGCCCTGACGTCTTTGCCGC
TCGCCTCCTGTGTTCTTCTTCTCCTCCTCCCCCTCCTCCCCCTTACATGG
GGCTACCCCTCCTACCTCCTCAATCCCGACGGCTGCCGCTCCCAGAAACT
CGAGGTACGACCGTGGTGGATCCCTCTTCCCGACAACTTCCCTTCTTCCC
TCCCCCTCTTCCTCCACCTGCCCCTTTCGCCCCATTCCTCACACCCACGG
CCCGTGCGTGCCAACCTCCAACCCCCTCATTCCACGTTTCCCATGCCACC
CGTCCAGGTCGGTTTCGACATAATGGGCTCCCCCGTCGTGGAAGAGAAAG
CTATGAAAGAAAGCCCCATCGTGGTCTTGCGGGGAGACACAGCCTTGCAC
TCCGGGAGCGAATACAAGAGCGGCGAGACCCTCTCTGTCAAGTTGGAAGG
GCGGGCGGGCATGTACTGCATGGAGGTCCGTTCCCGCCCTCCCTCCCGCT
CTCCTTCCCGCCCTCCCCCCCTCCCTCGCGTTGCTCTCGTGTCCTTTTTC
CTTCTTCATCTTCGCATGTTCCTTCTCTCTCCTCCATTCATCCTCTATCC
CTACTCCTCCTACGCTCTGCCCACGTGCCACTCCTCCCGCCTTGTTCCAT
GTTCACCCATTCAAACGTGCCCACATTCAAAAATTCAAATTTTCAAACCC
AGGTCCGCGGTGGTGCCGCCATGTTCTCGGGCGGCGCCTGCGACGGGACC
CGGGTGACCGAGCCCGACGTCTTGGCCCTCCCTATCGGGGACAAGGAGAC
GTTACAAACCGTTACGCTCCACGTGGGCCTCGCCAGCCGTTACGGACCGG
TGACTCTCCTCCCTCCCTTCGTCCTCCATCCTCCGGGGAAAGGTGGCGAC
GGTCCCGCCCCGTCCGAGGAGGAGGGGAGGGAGCCCGTCCTCTCCCTCGT
CCTCCCTCCCTCCCTGCCTCGCTTGGAGAAGACAGTGCTGCTGGAAAGGG
AGAGCGGGATGGAGCTTTCCTGGACCGTTGA
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Coding sequence (CDS) from alignment at KK037256.1:265093..266323-

>rna9851 ID=rna9851|Name=rna9851|organism=Nannochloropsis gaditana|type=CDS|length=3048bp|location=Sequence derived from alignment at KK037256.1:265093..266323- (Nannochloropsis gaditana)
ACAGTGCTGCTGGAAAGGGAGAGCGGGATGGAGCTTTCCTGGACCGTTGA
GTCCGCGGTGGTGCCGCCATGTTCTCGGGCGGCGCCTGCGACGGGACCCG
GGTGACCGAGCCCGACGTCTTGGCCCTCCCTATCGGGGACAAGGAGACGT
TACAAACCGTTACGCTCCACGTGGGCCTCGCCAGCCGTTACGGACCGGTG
ACTCTCCTCCCTCCCTTCGTCCTCCATCCTCCGGGGAAAGGTCGGTTTCG
ACATAATGGGCTCCCCCGTCGTGGAAGAGAAAGCTATGAAAGAAAGCCCC
ATCGTGGTCTTGCGGGGAGACACAGCCTTGCACTCCGGGAGCGAATACAA
GAGCGGCGAGACCCTCTCTGTCAAGTTGGAAGGGCGGGCGGGCATGTACT
GCATGGAGATGCGCCCCCTTCCGGCACCCGAATGGCGCAGTCTCAGCGTT
TTCAAAGGAAGAAGTCATGGTCGTCGATTCGAAGAGGAGAAAAGAACACG
AGGGCGAGGTCCGAATCCTAAGAAGTGCAAGATGAAGCCGCCGTCGCCAC
GGGAGAAAGGATTGCATCCAAAGCAGCACTTAAAGGGGCAGCAAGACGAG
GGGTATCACTGTGTCTGCTGCCGCCGTAGACCACACCTAGCCCTGACGTC
TTTGCCGCTCGCCTCCTGTGTTCTTCTTCTCCTCCTCCCCCTCCTCCCCC
TTACATGGGGCTACCCCTCCTACCTCCTCAATCCCGACGGCTGCCGCTCC
CAGAAACTCGAGACAGTGCTGCTGGAAAGGGAGAGCGGGATGGAGCTTTC
CTGGACCGTTGAGTCCGCGGTGGTGCCGCCATGTTCTCGGGCGGCGCCTG
CGACGGGACCCGGGTGACCGAGCCCGACGTCTTGGCCCTCCCTATCGGGG
ACAAGGAGACGTTACAAACCGTTACGCTCCACGTGGGCCTCGCCAGCCGT
TACGGACCGGTGACTCTCCTCCCTCCCTTCGTCCTCCATCCTCCGGGGAA
AGGTCGGTTTCGACATAATGGGCTCCCCCGTCGTGGAAGAGAAAGCTATG
AAAGAAAGCCCCATCGTGGTCTTGCGGGGAGACACAGCCTTGCACTCCGG
GAGCGAATACAAGAGCGGCGAGACCCTCTCTGTCAAGTTGGAAGGGCGGG
CGGGCATGTACTGCATGGAGATGCGCCCCCTTCCGGCACCCGAATGGCGC
AGTCTCAGCGTTTTCAAAGGAAGAAGTCATGGTCGTCGATTCGAAGAGGA
GAAAAGAACACGAGGGCGAGGTCCGAATCCTAAGAAGTGCAAGATGAAGC
CGCCGTCGCCACGGGAGAAAGGATTGCATCCAAAGCAGCACTTAAAGGGG
CAGCAAGACGAGGGGTATCACTGTGTCTGCTGCCGCCGTAGACCACACCT
AGCCCTGACGTCTTTGCCGCTCGCCTCCTGTGTTCTTCTTCTCCTCCTCC
CCCTCCTCCCCCTTACATGGGGCTACCCCTCCTACCTCCTCAATCCCGAC
GGCTGCCGCTCCCAGAAACTCGAGACAGTGCTGCTGGAAAGGGAGAGCGG
GATGGAGCTTTCCTGGACCGTTGAGTCCGCGGTGGTGCCGCCATGTTCTC
GGGCGGCGCCTGCGACGGGACCCGGGTGACCGAGCCCGACGTCTTGGCCC
TCCCTATCGGGGACAAGGAGACGTTACAAACCGTTACGCTCCACGTGGGC
CTCGCCAGCCGTTACGGACCGGTGACTCTCCTCCCTCCCTTCGTCCTCCA
TCCTCCGGGGAAAGGTCGGTTTCGACATAATGGGCTCCCCCGTCGTGGAA
GAGAAAGCTATGAAAGAAAGCCCCATCGTGGTCTTGCGGGGAGACACAGC
CTTGCACTCCGGGAGCGAATACAAGAGCGGCGAGACCCTCTCTGTCAAGT
TGGAAGGGCGGGCGGGCATGTACTGCATGGAGATGCGCCCCCTTCCGGCA
CCCGAATGGCGCAGTCTCAGCGTTTTCAAAGGAAGAAGTCATGGTCGTCG
ATTCGAAGAGGAGAAAAGAACACGAGGGCGAGGTCCGAATCCTAAGAAGT
GCAAGATGAAGCCGCCGTCGCCACGGGAGAAAGGATTGCATCCAAAGCAG
CACTTAAAGGGGCAGCAAGACGAGGGGTATCACTGTGTCTGCTGCCGCCG
TAGACCACACCTAGCCCTGACGTCTTTGCCGCTCGCCTCCTGTGTTCTTC
TTCTCCTCCTCCCCCTCCTCCCCCTTACATGGGGCTACCCCTCCTACCTC
CTCAATCCCGACGGCTGCCGCTCCCAGAAACTCGAGACAGTGCTGCTGGA
AAGGGAGAGCGGGATGGAGCTTTCCTGGACCGTTGAGTCCGCGGTGGTGC
CGCCATGTTCTCGGGCGGCGCCTGCGACGGGACCCGGGTGACCGAGCCCG
ACGTCTTGGCCCTCCCTATCGGGGACAAGGAGACGTTACAAACCGTTACG
CTCCACGTGGGCCTCGCCAGCCGTTACGGACCGGTGACTCTCCTCCCTCC
CTTCGTCCTCCATCCTCCGGGGAAAGGTCGGTTTCGACATAATGGGCTCC
CCCGTCGTGGAAGAGAAAGCTATGAAAGAAAGCCCCATCGTGGTCTTGCG
GGGAGACACAGCCTTGCACTCCGGGAGCGAATACAAGAGCGGCGAGACCC
TCTCTGTCAAGTTGGAAGGGCGGGCGGGCATGTACTGCATGGAGATGCGC
CCCCTTCCGGCACCCGAATGGCGCAGTCTCAGCGTTTTCAAAGGAAGAAG
TCATGGTCGTCGATTCGAAGAGGAGAAAAGAACACGAGGGCGAGGTCCGA
ATCCTAAGAAGTGCAAGATGAAGCCGCCGTCGCCACGGGAGAAAGGATTG
CATCCAAAGCAGCACTTAAAGGGGCAGCAAGACGAGGGGTATCACTGTGT
CTGCTGCCGCCGTAGACCACACCTAGCCCTGACGTCTTTGCCGCTCGCCT
CCTGTGTTCTTCTTCTCCTCCTCCCCCTCCTCCCCCTTACATGGGGCTAC
CCCTCCTACCTCCTCAATCCCGACGGCTGCCGCTCCCAGAAACTCGAG
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Synonyms
Publications